RNA–Protein interactions for RNA: ENST00000601689.1

UPF1-212, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-212ENST00000601689 VSIG4Q9Y279 399 aa15.16■□□□□ 0.02
UPF1-212ENST00000601689 PKD1L1Q8TDX9 2849 aa15.16■□□□□ 0.02
UPF1-212ENST00000601689 MPPED1O15442 326 aa15.15■□□□□ 0.02
UPF1-212ENST00000601689 RAB9AP51151 201 aa15.15■□□□□ 0.02
UPF1-212ENST00000601689 RPL30P62888 115 aaKnown RBP15.15■□□□□ 0.02
UPF1-212ENST00000601689 IL18Q14116 193 aa15.15■□□□□ 0.02
UPF1-212ENST00000601689 TNXAQ16473 311 aa15.15■□□□□ 0.02
UPF1-212ENST00000601689 RNASE10Q5GAN6 216 aaKnown RBP15.15■□□□□ 0.02
UPF1-212ENST00000601689 LYSMD2Q8IV50 215 aa15.15■□□□□ 0.02
UPF1-212ENST00000601689 SPAG16Q8N0X2 631 aa15.15■□□□□ 0.02
UPF1-212ENST00000601689 MINDY2Q8NBR6 621 aa15.15■□□□□ 0.02
UPF1-212ENST00000601689 FAM103A1Q9BTL3 118 aaKnown RBP15.15■□□□□ 0.02
UPF1-212ENST00000601689 MCRIP2Q9BUT9 160 aaKnown RBP15.15■□□□□ 0.02
UPF1-212ENST00000601689 SRRM4A7MD48 611 aaKnown RBP15.14■□□□□ 0.01
UPF1-212ENST00000601689 GABARAPH6UMI1 98 aa15.14■□□□□ 0.01
UPF1-212ENST00000601689 CTDSP2O14595 271 aa15.14■□□□□ 0.01
UPF1-212ENST00000601689 RBFOX2O43251 390 aaKnown RBP eCLIP15.14■□□□□ 0.01
UPF1-212ENST00000601689 OR2A4O95047 310 aa15.14■□□□□ 0.01
UPF1-212ENST00000601689 HPRT1P00492 218 aa15.14■□□□□ 0.01
UPF1-212ENST00000601689 IGLV1-40P01703 118 aa15.14■□□□□ 0.01
UPF1-212ENST00000601689 CRYGBP07316 175 aa15.14■□□□□ 0.01
UPF1-212ENST00000601689 NDPQ00604 133 aa15.14■□□□□ 0.01
UPF1-212ENST00000601689 SSBP1Q04837 148 aaKnown RBP15.14■□□□□ 0.01
UPF1-212ENST00000601689 RNASE12Q5GAN4 147 aaKnown RBP15.14■□□□□ 0.01
UPF1-212ENST00000601689 ZNF818PQ6ZRF7 136 aa15.14■□□□□ 0.01
UPF1-212ENST00000601689 LCNL1Q6ZST4 164 aa15.14■□□□□ 0.01
UPF1-212ENST00000601689 LAX1Q8IWV1 398 aa15.14■□□□□ 0.01
UPF1-212ENST00000601689 C4orf3Q8WVX3 66 aa15.14■□□□□ 0.01
UPF1-212ENST00000601689 DPF1Q92782 380 aa15.14■□□□□ 0.01
UPF1-212ENST00000601689 RCC1LQ96I51 464 aaKnown RBP15.14■□□□□ 0.01
UPF1-212ENST00000601689 OR2A7Q96R45 310 aa15.14■□□□□ 0.01
UPF1-212ENST00000601689 TPSG1Q9NRR2 321 aa15.14■□□□□ 0.01
UPF1-212ENST00000601689 NBEAL1Q6ZS30 2694 aa15.14■□□□□ 0.01
UPF1-212ENST00000601689 H3BUA1 57 aa15.13■□□□□ 0.01
UPF1-212ENST00000601689 CCL24O00175 119 aa15.13■□□□□ 0.01
UPF1-212ENST00000601689 GPR31O00270 319 aa15.13■□□□□ 0.01
UPF1-212ENST00000601689 SAA1P0DJI8 122 aaPredicted RBP15.13■□□□□ 0.01
UPF1-212ENST00000601689 GNRHRP30968 328 aa15.13■□□□□ 0.01
UPF1-212ENST00000601689 TAS2R19P59542 299 aa15.13■□□□□ 0.01
UPF1-212ENST00000601689 DEFA6Q01524 100 aa15.13■□□□□ 0.01
UPF1-212ENST00000601689 PRSS8Q16651 343 aa15.13■□□□□ 0.01
UPF1-212ENST00000601689 VAX1Q5SQQ9 334 aa15.13■□□□□ 0.01
UPF1-212ENST00000601689 WFDC9Q8NEX5 89 aa15.13■□□□□ 0.01
UPF1-212ENST00000601689 OR51H1Q8NH63 302 aa15.13■□□□□ 0.01
UPF1-212ENST00000601689 MCFD2Q8NI22 146 aa15.13■□□□□ 0.01
UPF1-212ENST00000601689 SPIN2AQ99865 258 aa15.13■□□□□ 0.01
UPF1-212ENST00000601689 SPIN2BQ9BPZ2 258 aa15.13■□□□□ 0.01
UPF1-212ENST00000601689 MTFP1Q9UDX5 166 aa15.13■□□□□ 0.01
UPF1-212ENST00000601689 RSL24D1Q9UHA3 163 aaKnown RBP15.13■□□□□ 0.01
UPF1-212ENST00000601689 CEPT1Q9Y6K0 416 aa15.13■□□□□ 0.01
UPF1-212ENST00000601689 NQO2P16083 231 aa15.12■□□□□ 0.01
UPF1-212ENST00000601689 S100A5P33763 92 aa15.12■□□□□ 0.01
UPF1-212ENST00000601689 MAS1LP35410 378 aa15.12■□□□□ 0.01
UPF1-212ENST00000601689 RAB25P57735 213 aa15.12■□□□□ 0.01
UPF1-212ENST00000601689 TAS2R31P59538 309 aa15.12■□□□□ 0.01
UPF1-212ENST00000601689 ERVK-16P61578 105 aa15.12■□□□□ 0.01
UPF1-212ENST00000601689 EIF4EBP1Q13541 118 aaPredicted RBP15.12■□□□□ 0.01
UPF1-212ENST00000601689 IDO2Q6ZQW0 420 aa15.12■□□□□ 0.01
UPF1-212ENST00000601689 SLC38A6Q8IZM9 456 aa15.12■□□□□ 0.01
UPF1-212ENST00000601689 ZNF491Q8N8L2 437 aa15.12■□□□□ 0.01
UPF1-212ENST00000601689 OR52I2Q8NH67 350 aa15.12■□□□□ 0.01
UPF1-212ENST00000601689 OR4A5Q8NH83 315 aa15.12■□□□□ 0.01
UPF1-212ENST00000601689 RHOVQ96L33 236 aa15.12■□□□□ 0.01
UPF1-212ENST00000601689 ABHD1Q96SE0 405 aa15.12■□□□□ 0.01
UPF1-212ENST00000601689 KLK11Q9UBX7 282 aa15.12■□□□□ 0.01
UPF1-212ENST00000601689 FBXO7Q9Y3I1 522 aa15.12■□□□□ 0.01
UPF1-212ENST00000601689 A0A0G2JLM5 398 aa15.11■□□□□ 0.01
UPF1-212ENST00000601689 EGR2P11161 476 aaPredicted RBP15.11■□□□□ 0.01
UPF1-212ENST00000601689 TPPP2P59282 170 aa15.11■□□□□ 0.01
UPF1-212ENST00000601689 PJVKQ0ZLH3 352 aa15.11■□□□□ 0.01
UPF1-212ENST00000601689 SLC25A42Q86VD7 318 aa15.11■□□□□ 0.01
UPF1-212ENST00000601689 ARRDC1Q8N5I2 433 aa15.11■□□□□ 0.01
UPF1-212ENST00000601689 TMEM229BQ8NBD8 167 aa15.11■□□□□ 0.01
UPF1-212ENST00000601689 DMBX1Q8NFW5 382 aa15.11■□□□□ 0.01
UPF1-212ENST00000601689 SRSF12Q8WXF0 261 aaKnown RBP15.11■□□□□ 0.01
UPF1-212ENST00000601689 MIXL1Q9H2W2 232 aa15.11■□□□□ 0.01
UPF1-212ENST00000601689 HRASLSQ9HDD0 168 aa15.11■□□□□ 0.01
UPF1-212ENST00000601689 ZMAT5Q9UDW3 170 aaKnown RBP15.11■□□□□ 0.01
UPF1-212ENST00000601689 CMYA5Q8N3K9 4069 aa15.1■□□□□ 0.01
UPF1-212ENST00000601689 DPPA5A6NC42 116 aa15.1■□□□□ 0.01
UPF1-212ENST00000601689 MSGN1A6NI15 193 aa15.1■□□□□ 0.01
UPF1-212ENST00000601689 ZNF701M0R085 212 aaPredicted RBP15.1■□□□□ 0.01
UPF1-212ENST00000601689 ARPC1BO15143 372 aaKnown RBP15.1■□□□□ 0.01
UPF1-212ENST00000601689 PGLYRP1O75594 196 aaPredicted RBP15.1■□□□□ 0.01
UPF1-212ENST00000601689 KBTBD11O94819 623 aa15.1■□□□□ 0.01
UPF1-212ENST00000601689 TRGV3P03979 118 aa15.1■□□□□ 0.01
UPF1-212ENST00000601689 UCP3P55916 312 aa15.1■□□□□ 0.01
UPF1-212ENST00000601689 MRPL41Q8IXM3 137 aaKnown RBP15.1■□□□□ 0.01
UPF1-212ENST00000601689 SLIRPQ9GZT3 109 aaKnown RBP15.1■□□□□ 0.01
UPF1-212ENST00000601689 KLK15Q9H2R5 256 aa15.1■□□□□ 0.01
UPF1-212ENST00000601689 ZNF430Q9H8G1 570 aaPredicted RBP15.1■□□□□ 0.01
UPF1-212ENST00000601689 PLEKHA2Q9HB19 425 aa15.1■□□□□ 0.01
UPF1-212ENST00000601689 C13orf42A0A1B0GVH6 325 aa15.09■□□□□ 0.01
UPF1-212ENST00000601689 FABP12A6NFH5 140 aa15.09■□□□□ 0.01
UPF1-212ENST00000601689 G3V4G9 280 aa15.09■□□□□ 0.01
UPF1-212ENST00000601689 CTDSPLO15194 276 aa15.09■□□□□ 0.01
UPF1-212ENST00000601689 RLN1P04808 185 aa15.09■□□□□ 0.01
UPF1-212ENST00000601689 OR8U8P0C7N1 319 aa15.09■□□□□ 0.01
UPF1-212ENST00000601689 PGAM2P15259 253 aa15.09■□□□□ 0.01
UPF1-212ENST00000601689 F2RP25116 425 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms