RNA–Protein interactions for RNA: ENST00000598553.1

VRK3-214, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 595 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-214ENST00000598553 OVOL1O14753 267 aa8.19□□□□□ -1.1
VRK3-214ENST00000598553 PTTG1O95997 202 aa8.19□□□□□ -1.1
VRK3-214ENST00000598553 APOA1P02647 267 aa8.19□□□□□ -1.1
VRK3-214ENST00000598553 SPNP16150 400 aa8.19□□□□□ -1.1
VRK3-214ENST00000598553 DUTP33316 252 aaKnown RBP8.19□□□□□ -1.1
VRK3-214ENST00000598553 RORCP51449 518 aa8.19□□□□□ -1.1
VRK3-214ENST00000598553 BRWD1-AS2P59051 145 aa8.19□□□□□ -1.1
VRK3-214ENST00000598553 CDNFQ49AH0 187 aa8.19□□□□□ -1.1
VRK3-214ENST00000598553 OR2B11Q5JQS5 317 aa8.19□□□□□ -1.1
VRK3-214ENST00000598553 PYHIN1Q6K0P9 492 aa8.19□□□□□ -1.1
VRK3-214ENST00000598553 SFXN4Q6P4A7 337 aa8.19□□□□□ -1.1
VRK3-214ENST00000598553 ZNF562Q6V9R5 426 aa8.19□□□□□ -1.1
VRK3-214ENST00000598553 OR10J5Q8NHC4 309 aa8.19□□□□□ -1.1
VRK3-214ENST00000598553 FLYWCH2Q96CP2 140 aaKnown RBP8.19□□□□□ -1.1
VRK3-214ENST00000598553 RHOVQ96L33 236 aa8.19□□□□□ -1.1
VRK3-214ENST00000598553 ZNF256Q9Y2P7 627 aaPredicted RBP8.19□□□□□ -1.1
VRK3-214ENST00000598553 A0A1B0GW64 132 aa8.18□□□□□ -1.1
VRK3-214ENST00000598553 METTL21EPA6NDL7 271 aa8.18□□□□□ -1.1
VRK3-214ENST00000598553 LINC01619G3V211 115 aa8.18□□□□□ -1.1
VRK3-214ENST00000598553 CRYZL1O95825 349 aa8.18□□□□□ -1.1
VRK3-214ENST00000598553 PRH1P02810 166 aa8.18□□□□□ -1.1
VRK3-214ENST00000598553 TRGV3P03979 118 aa8.18□□□□□ -1.1
VRK3-214ENST00000598553 MYOD1P15172 320 aa8.18□□□□□ -1.1
VRK3-214ENST00000598553 TMEM267Q0VDI3 215 aaPredicted RBP8.18□□□□□ -1.1
VRK3-214ENST00000598553 EIF4EBP1Q13541 118 aaPredicted RBP8.18□□□□□ -1.1
VRK3-214ENST00000598553 SRSF7Q16629 238 aaKnown RBP eCLIP8.18□□□□□ -1.1
VRK3-214ENST00000598553 AKIRIN2Q53H80 203 aa8.18□□□□□ -1.1
VRK3-214ENST00000598553 TMEM177Q53S58 311 aa8.18□□□□□ -1.1
VRK3-214ENST00000598553 Q6ZS49 121 aa8.18□□□□□ -1.1
VRK3-214ENST00000598553 VKORC1L1Q8N0U8 176 aa8.18□□□□□ -1.1
VRK3-214ENST00000598553 GVQW1Q8N7I0 195 aa8.18□□□□□ -1.1
VRK3-214ENST00000598553 ST6GALNAC5Q9BVH7 336 aa8.18□□□□□ -1.1
VRK3-214ENST00000598553 ANKRD34BA5PLL1 514 aa8.17□□□□□ -1.1
VRK3-214ENST00000598553 E7EUB6 86 aa8.17□□□□□ -1.1
VRK3-214ENST00000598553 SHOXO15266 292 aa8.17□□□□□ -1.1
VRK3-214ENST00000598553 SAP30O75446 220 aa8.17□□□□□ -1.1
VRK3-214ENST00000598553 LY86O95711 162 aa8.17□□□□□ -1.1
VRK3-214ENST00000598553 EDN2P20800 178 aa8.17□□□□□ -1.1
VRK3-214ENST00000598553 DTYMKP23919 212 aa8.17□□□□□ -1.1
VRK3-214ENST00000598553 INSL3P51460 131 aa8.17□□□□□ -1.1
VRK3-214ENST00000598553 DYRK1AQ13627 763 aa8.17□□□□□ -1.1
VRK3-214ENST00000598553 ARL6IP1Q15041 203 aa8.17□□□□□ -1.1
VRK3-214ENST00000598553 HACD4Q5VWC8 232 aa8.17□□□□□ -1.1
VRK3-214ENST00000598553 ACSM6Q6P461 480 aa8.17□□□□□ -1.1
VRK3-214ENST00000598553 OVCH2Q7RTZ1 564 aa8.17□□□□□ -1.1
VRK3-214ENST00000598553 CCDC190Q86UF4 302 aa8.17□□□□□ -1.1
VRK3-214ENST00000598553 LYSMD2Q8IV50 215 aa8.17□□□□□ -1.1
VRK3-214ENST00000598553 POC5Q8NA72 575 aa8.17□□□□□ -1.1
VRK3-214ENST00000598553 AP3S1Q92572 193 aa8.17□□□□□ -1.1
VRK3-214ENST00000598553 GINS4Q9BRT9 223 aa8.17□□□□□ -1.1
VRK3-214ENST00000598553 MEIS3P1A6NDR6 274 aa8.16□□□□□ -1.1
VRK3-214ENST00000598553 HSPB1P04792 205 aaKnown RBP8.16□□□□□ -1.1
VRK3-214ENST00000598553 SAA1P0DJI8 122 aaPredicted RBP8.16□□□□□ -1.1
VRK3-214ENST00000598553 TALDO1P37837 337 aa8.16□□□□□ -1.1
VRK3-214ENST00000598553 IFITM3Q01628 133 aa8.16□□□□□ -1.1
VRK3-214ENST00000598553 CBX3Q13185 183 aa8.16□□□□□ -1.1
VRK3-214ENST00000598553 TNXAQ16473 311 aa8.16□□□□□ -1.1
VRK3-214ENST00000598553 RTL8BQ17RB0 113 aa8.16□□□□□ -1.1
VRK3-214ENST00000598553 IDNKQ5T6J7 187 aa8.16□□□□□ -1.1
VRK3-214ENST00000598553 IL34Q6ZMJ4 242 aa8.16□□□□□ -1.1
VRK3-214ENST00000598553 ZNF429Q86V71 674 aa8.16□□□□□ -1.1
VRK3-214ENST00000598553 TPRA1Q86W33 373 aa8.16□□□□□ -1.1
VRK3-214ENST00000598553 SLA2Q9H6Q3 261 aa8.16□□□□□ -1.1
VRK3-214ENST00000598553 ZNF430Q9H8G1 570 aaPredicted RBP8.16□□□□□ -1.1
VRK3-214ENST00000598553 ZNF355PQ9NSJ1 428 aa8.16□□□□□ -1.1
VRK3-214ENST00000598553 RBMX2Q9Y388 322 aaKnown RBP8.16□□□□□ -1.1
VRK3-214ENST00000598553 RBM7Q9Y580 266 aaKnown RBP8.16□□□□□ -1.1
VRK3-214ENST00000598553 HMX3A6NHT5 357 aa8.15□□□□□ -1.1
VRK3-214ENST00000598553 MSGN1A6NI15 193 aa8.15□□□□□ -1.1
VRK3-214ENST00000598553 H3BUA1 57 aa8.15□□□□□ -1.1
VRK3-214ENST00000598553 FCGR3BO75015 233 aa8.15□□□□□ -1.1
VRK3-214ENST00000598553 TUSC2O75896 110 aa8.15□□□□□ -1.1
VRK3-214ENST00000598553 CNIH1O95406 144 aa8.15□□□□□ -1.1
VRK3-214ENST00000598553 HLA-DQB1P01920 261 aa8.15□□□□□ -1.1
VRK3-214ENST00000598553 GP9P14770 177 aa8.15□□□□□ -1.1
VRK3-214ENST00000598553 LGALS7P47929 136 aa8.15□□□□□ -1.1
VRK3-214ENST00000598553 UBE2KP61086 200 aa8.15□□□□□ -1.1
VRK3-214ENST00000598553 PRSS8Q16651 343 aa8.15□□□□□ -1.1
VRK3-214ENST00000598553 SBSPONQ8IVN8 264 aa8.15□□□□□ -1.1
VRK3-214ENST00000598553 ZNF645Q8N7E2 425 aa8.15□□□□□ -1.1
VRK3-214ENST00000598553 ADAD2Q8NCV1 583 aaKnown RBP8.15□□□□□ -1.1
VRK3-214ENST00000598553 SRSF12Q8WXF0 261 aaKnown RBP8.15□□□□□ -1.1
VRK3-214ENST00000598553 SNAPC3Q92966 411 aa8.15□□□□□ -1.1
VRK3-214ENST00000598553 SLC25A46Q96AG3 418 aa8.15□□□□□ -1.1
VRK3-214ENST00000598553 ADTRPQ96IZ2 230 aa8.15□□□□□ -1.1
VRK3-214ENST00000598553 NEURL2Q9BR09 285 aa8.15□□□□□ -1.1
VRK3-214ENST00000598553 CCL28Q9NRJ3 127 aa8.15□□□□□ -1.1
VRK3-214ENST00000598553 SPATA2Q9UM82 520 aa8.15□□□□□ -1.1
VRK3-214ENST00000598553 OR2W1Q9Y3N9 320 aa8.15□□□□□ -1.1
VRK3-214ENST00000598553 KMT2CQ8NEZ4 4911 aaKnown RBP8.14□□□□□ -1.11
VRK3-214ENST00000598553 TENM3Q9P273 2699 aa8.14□□□□□ -1.11
VRK3-214ENST00000598553 TRAV18A0A075B6X5 111 aa8.14□□□□□ -1.11
VRK3-214ENST00000598553 CGB1A6NKQ9 187 aa8.14□□□□□ -1.11
VRK3-214ENST00000598553 TNFSF12O43508 249 aa8.14□□□□□ -1.11
VRK3-214ENST00000598553 SCGNO76038 276 aa8.14□□□□□ -1.11
VRK3-214ENST00000598553 RRASP10301 218 aa8.14□□□□□ -1.11
VRK3-214ENST00000598553 AADACP22760 399 aa8.14□□□□□ -1.11
VRK3-214ENST00000598553 PTBP1P26599 531 aaKnown RBP eCLIP8.14□□□□□ -1.11
VRK3-214ENST00000598553 TNFSF8P32971 234 aa8.14□□□□□ -1.11
VRK3-214ENST00000598553 RPS19P39019 145 aaKnown RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms