RNA–Protein interactions for RNA: ENST00000589285.1

ZNF540-207, Transcript of zinc finger protein 540, humanhuman

Gene ZNF540, Length 3,106 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-207ENST00000589285 EGLN1Q9GZT9 426 aa2.66□□□□□ -1.98
ZNF540-207ENST00000589285 NXF2Q9GZY0 626 aaKnown RBP2.66□□□□□ -1.98
ZNF540-207ENST00000589285 CXXC4Q9H2H0 198 aa2.66□□□□□ -1.98
ZNF540-207ENST00000589285 OR51M1Q9H341 326 aa2.66□□□□□ -1.98
ZNF540-207ENST00000589285 OR51I2Q9H344 312 aa2.66□□□□□ -1.98
ZNF540-207ENST00000589285 TMEM106BQ9NUM4 274 aa2.66□□□□□ -1.98
ZNF540-207ENST00000589285 EHFQ9NZC4 300 aa2.66□□□□□ -1.98
ZNF540-207ENST00000589285 OR1A1Q9P1Q5 309 aa2.66□□□□□ -1.98
ZNF540-207ENST00000589285 GNG12Q9UBI6 72 aa2.66□□□□□ -1.98
ZNF540-207ENST00000589285 V9GYH0 126 aa2.66□□□□□ -1.98
ZNF540-207ENST00000589285 PPIAL4EA0A075B759 164 aa2.65□□□□□ -1.98
ZNF540-207ENST00000589285 TRAV1-2A0A0B4J238 106 aa2.65□□□□□ -1.98
ZNF540-207ENST00000589285 TRAV24A0A0B4J272 114 aa2.65□□□□□ -1.98
ZNF540-207ENST00000589285 A0A0B4J293 547 aa2.65□□□□□ -1.98
ZNF540-207ENST00000589285 CEACAM18A8MTB9 384 aa2.65□□□□□ -1.98
ZNF540-207ENST00000589285 PPIAL4DF5H284 164 aa2.65□□□□□ -1.98
ZNF540-207ENST00000589285 J3QT63 122 aa2.65□□□□□ -1.98
ZNF540-207ENST00000589285 XRCC3O43542 346 aa2.65□□□□□ -1.98
ZNF540-207ENST00000589285 IFNA6P05013 189 aa2.65□□□□□ -1.98
ZNF540-207ENST00000589285 FAM106CPP0CH98 169 aa2.65□□□□□ -1.98
ZNF540-207ENST00000589285 PPIAL4FP0DN26 164 aa2.65□□□□□ -1.98
ZNF540-207ENST00000589285 ZNF250P15622 560 aa2.65□□□□□ -1.98
ZNF540-207ENST00000589285 TUBG1P23258 451 aa2.65□□□□□ -1.98
ZNF540-207ENST00000589285 CPT2P23786 658 aa2.65□□□□□ -1.98
ZNF540-207ENST00000589285 ETV6P41212 452 aa2.65□□□□□ -1.98
ZNF540-207ENST00000589285 GPR6P46095 362 aaPredicted RBP2.65□□□□□ -1.98
ZNF540-207ENST00000589285 RBM11P57052 281 aaKnown RBP2.65□□□□□ -1.98
ZNF540-207ENST00000589285 ZNF273Q14593 569 aa2.65□□□□□ -1.98
ZNF540-207ENST00000589285 TRAM1Q15629 374 aa2.65□□□□□ -1.98
ZNF540-207ENST00000589285 CHRFAM7AQ494W8 412 aa2.65□□□□□ -1.98
ZNF540-207ENST00000589285 GDPGP1Q6ZNW5 385 aa2.65□□□□□ -1.98
ZNF540-207ENST00000589285 OR11L1Q8NGX0 322 aa2.65□□□□□ -1.98
ZNF540-207ENST00000589285 OR10R2Q8NGX6 335 aa2.65□□□□□ -1.98
ZNF540-207ENST00000589285 OR1L1Q8NH94 360 aa2.65□□□□□ -1.98
ZNF540-207ENST00000589285 ARL11Q969Q4 196 aa2.65□□□□□ -1.98
ZNF540-207ENST00000589285 GINS4Q9BRT9 223 aa2.65□□□□□ -1.98
ZNF540-207ENST00000589285 CHIAQ9BZP6 476 aa2.65□□□□□ -1.98
ZNF540-207ENST00000589285 RAB1BQ9H0U4 201 aa2.65□□□□□ -1.98
ZNF540-207ENST00000589285 RGCCQ9H4X1 137 aa2.65□□□□□ -1.98
ZNF540-207ENST00000589285 RAB9BQ9NP90 201 aa2.65□□□□□ -1.98
ZNF540-207ENST00000589285 TUBG2Q9NRH3 451 aa2.65□□□□□ -1.98
ZNF540-207ENST00000589285 FAM212BQ9NTI7 297 aaPredicted RBP2.65□□□□□ -1.98
ZNF540-207ENST00000589285 CLN8Q9UBY8 286 aa2.65□□□□□ -1.98
ZNF540-207ENST00000589285 MIOXQ9UGB7 285 aa2.65□□□□□ -1.98
ZNF540-207ENST00000589285 MGAT4AQ9UM21 535 aa2.65□□□□□ -1.98
ZNF540-207ENST00000589285 FOXJ3Q9UPW0 622 aa2.65□□□□□ -1.98
ZNF540-207ENST00000589285 PPIAL4AQ9Y536 164 aa2.65□□□□□ -1.98
ZNF540-207ENST00000589285 MPC1Q9Y5U8 109 aa2.65□□□□□ -1.98
ZNF540-207ENST00000589285 TENM1Q9UKZ4 2725 aa2.65□□□□□ -1.98
ZNF540-207ENST00000589285 hCG_1809904A0A1W2PP81 198 aa2.65□□□□□ -1.99
ZNF540-207ENST00000589285 A0A1W2PPE2 198 aa2.65□□□□□ -1.99
ZNF540-207ENST00000589285 A0A1W2PR64 198 aa2.65□□□□□ -1.99
ZNF540-207ENST00000589285 LRRC30A6NM36 301 aa2.65□□□□□ -1.99
ZNF540-207ENST00000589285 CCSO14618 274 aa2.65□□□□□ -1.99
ZNF540-207ENST00000589285 HSD17B6O14756 317 aa2.65□□□□□ -1.99
ZNF540-207ENST00000589285 MRPS14O60783 128 aaKnown RBP2.65□□□□□ -1.99
ZNF540-207ENST00000589285 DANCRP0C864 163 aa2.65□□□□□ -1.99
ZNF540-207ENST00000589285 DEFA1P59665 94 aa2.65□□□□□ -1.99
ZNF540-207ENST00000589285 DEFA3P59666 94 aa2.65□□□□□ -1.99
ZNF540-207ENST00000589285 GNB2P62879 340 aa2.65□□□□□ -1.99
ZNF540-207ENST00000589285 RPS27AP62979 156 aaKnown RBP2.65□□□□□ -1.99
ZNF540-207ENST00000589285 SLC9A3R2Q15599 337 aa2.65□□□□□ -1.99
ZNF540-207ENST00000589285 SMIM21Q3B7S5 101 aa2.65□□□□□ -1.99
ZNF540-207ENST00000589285 AKIRIN2Q53H80 203 aa2.65□□□□□ -1.99
ZNF540-207ENST00000589285 UBE2NLQ5JXB2 153 aa2.65□□□□□ -1.99
ZNF540-207ENST00000589285 PRAMEF5Q5TYX0 476 aa2.65□□□□□ -1.99
ZNF540-207ENST00000589285 RNLSQ5VYX0 342 aa2.65□□□□□ -1.99
ZNF540-207ENST00000589285 KCTD9Q7L273 389 aa2.65□□□□□ -1.99
ZNF540-207ENST00000589285 LRRC28Q86X40 367 aaPredicted RBP2.65□□□□□ -1.99
ZNF540-207ENST00000589285 OR56B1Q8NGI3 324 aa2.65□□□□□ -1.99
ZNF540-207ENST00000589285 OR5M8Q8NGP6 311 aa2.65□□□□□ -1.99
ZNF540-207ENST00000589285 ZNF596Q8TC21 504 aa2.65□□□□□ -1.99
ZNF540-207ENST00000589285 DEDD2Q8WXF8 326 aa2.65□□□□□ -1.99
ZNF540-207ENST00000589285 SPSB1Q96BD6 273 aa2.65□□□□□ -1.99
ZNF540-207ENST00000589285 BSCL2Q96G97 398 aaPredicted RBP2.65□□□□□ -1.99
ZNF540-207ENST00000589285 HARBI1Q96MB7 349 aa2.65□□□□□ -1.99
ZNF540-207ENST00000589285 ATP6V0BQ99437 205 aa2.65□□□□□ -1.99
ZNF540-207ENST00000589285 SDHCQ99643 169 aaPredicted RBP2.65□□□□□ -1.99
ZNF540-207ENST00000589285 SPXQ9BT56 116 aa2.65□□□□□ -1.99
ZNF540-207ENST00000589285 PECRQ9BY49 303 aa2.65□□□□□ -1.99
ZNF540-207ENST00000589285 MFFQ9GZY8 342 aa2.65□□□□□ -1.99
ZNF540-207ENST00000589285 FN3KRPQ9HA64 309 aa2.65□□□□□ -1.99
ZNF540-207ENST00000589285 ISYNA1Q9NPH2 558 aa2.65□□□□□ -1.99
ZNF540-207ENST00000589285 OR2S2Q9NQN1 319 aa2.65□□□□□ -1.99
ZNF540-207ENST00000589285 CBLN4Q9NTU7 201 aa2.65□□□□□ -1.99
ZNF540-207ENST00000589285 CTSZQ9UBR2 303 aa2.65□□□□□ -1.99
ZNF540-207ENST00000589285 HILPDAQ9Y5L2 63 aa2.65□□□□□ -1.99
ZNF540-207ENST00000589285 FBN1P35555 2871 aaKnown RBP2.65□□□□□ -1.99
ZNF540-207ENST00000589285 IGLV3-9A0A075B6K5 115 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 IGHV4-61A0A0C4DH41 118 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 BTBD17A6NE02 478 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 MFSD2BA6NFX1 497 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 OR5B21A6NL26 309 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 ZNF736B4DX44 427 aaPredicted RBP2.64□□□□□ -1.99
ZNF540-207ENST00000589285 SH2D1BO14796 132 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 ARPC1BO15143 372 aaKnown RBP2.64□□□□□ -1.99
ZNF540-207ENST00000589285 SIX6O95475 246 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 TGFAP01135 160 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 TSHBP01222 138 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 IGHV2-70P01814 119 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms