RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 ARL6IP1Q15041 203 aa10.93□□□□□ -0.66
VMP1-206ENST00000587945 VKORC1L1Q8N0U8 176 aa10.93□□□□□ -0.66
VMP1-206ENST00000587945 OSR1Q8TAX0 266 aaPredicted RBP10.93□□□□□ -0.66
VMP1-206ENST00000587945 LGALS14Q8TCE9 139 aa10.93□□□□□ -0.66
VMP1-206ENST00000587945 CENPOQ9BU64 300 aa10.93□□□□□ -0.66
VMP1-206ENST00000587945 AKIP1Q9NQ31 210 aa10.93□□□□□ -0.66
VMP1-206ENST00000587945 C19orf73Q9NVV2 129 aa10.93□□□□□ -0.66
VMP1-206ENST00000587945 RBMX2Q9Y388 322 aaKnown RBP10.93□□□□□ -0.66
VMP1-206ENST00000587945 RRP15Q9Y3B9 282 aaKnown RBP10.93□□□□□ -0.66
VMP1-206ENST00000587945 OR2W1Q9Y3N9 320 aa10.93□□□□□ -0.66
VMP1-206ENST00000587945 SSX5O60225 188 aa10.92□□□□□ -0.66
VMP1-206ENST00000587945 MRPS14O60783 128 aaKnown RBP10.92□□□□□ -0.66
VMP1-206ENST00000587945 CTXN2P0C2S0 81 aa10.92□□□□□ -0.66
VMP1-206ENST00000587945 CLEC2LP0C7M8 214 aa10.92□□□□□ -0.66
VMP1-206ENST00000587945 FGF9P31371 208 aaPredicted RBP10.92□□□□□ -0.66
VMP1-206ENST00000587945 GNG2P59768 71 aa10.92□□□□□ -0.66
VMP1-206ENST00000587945 CDK10Q15131 360 aa10.92□□□□□ -0.66
VMP1-206ENST00000587945 RPEL1Q2QD12 228 aa10.92□□□□□ -0.66
VMP1-206ENST00000587945 CASC10Q5T4H9 136 aa10.92□□□□□ -0.66
VMP1-206ENST00000587945 KCTD9Q7L273 389 aa10.92□□□□□ -0.66
VMP1-206ENST00000587945 SGPP2Q8IWX5 399 aa10.92□□□□□ -0.66
VMP1-206ENST00000587945 GPHA2Q96T91 129 aa10.92□□□□□ -0.66
VMP1-206ENST00000587945 OR51E2Q9H255 320 aa10.92□□□□□ -0.66
VMP1-206ENST00000587945 IZUMO1RA6ND01 250 aa10.91□□□□□ -0.66
VMP1-206ENST00000587945 HMX3A6NHT5 357 aa10.91□□□□□ -0.66
VMP1-206ENST00000587945 BMPR1BO00238 502 aa10.91□□□□□ -0.66
VMP1-206ENST00000587945 ACTL6BO94805 426 aa10.91□□□□□ -0.66
VMP1-206ENST00000587945 SDC2P34741 201 aa10.91□□□□□ -0.66
VMP1-206ENST00000587945 MXD1Q05195 221 aa10.91□□□□□ -0.66
VMP1-206ENST00000587945 ATP5G2Q06055 141 aa10.91□□□□□ -0.66
VMP1-206ENST00000587945 EXOSC2Q13868 293 aaKnown RBP10.91□□□□□ -0.66
VMP1-206ENST00000587945 TATDN3Q17R31 274 aa10.91□□□□□ -0.66
VMP1-206ENST00000587945 SFXN4Q6P4A7 337 aa10.91□□□□□ -0.66
VMP1-206ENST00000587945 CNIH2Q6PI25 160 aa10.91□□□□□ -0.66
VMP1-206ENST00000587945 C19orf35Q6ZS72 473 aa10.91□□□□□ -0.66
VMP1-206ENST00000587945 SNAPC3Q92966 411 aa10.91□□□□□ -0.66
VMP1-206ENST00000587945 TM2D3Q9BRN9 247 aa10.91□□□□□ -0.66
VMP1-206ENST00000587945 DCSTAMPQ9H295 470 aa10.91□□□□□ -0.66
VMP1-206ENST00000587945 RNF167Q9H6Y7 350 aa10.91□□□□□ -0.66
VMP1-206ENST00000587945 SPATA2Q9UM82 520 aa10.91□□□□□ -0.66
VMP1-206ENST00000587945 SSR3Q9UNL2 185 aa10.91□□□□□ -0.66
VMP1-206ENST00000587945 PRELID3BQ9Y3B1 194 aa10.91□□□□□ -0.66
VMP1-206ENST00000587945 RYR2Q92736 4967 aa10.9□□□□□ -0.66
VMP1-206ENST00000587945 TRBV9A0A0B4J1U6 114 aa10.9□□□□□ -0.66
VMP1-206ENST00000587945 H0Y980 276 aa10.9□□□□□ -0.66
VMP1-206ENST00000587945 OR2J3O76001 311 aa10.9□□□□□ -0.66
VMP1-206ENST00000587945 ATP6V1G2O95670 118 aa10.9□□□□□ -0.66
VMP1-206ENST00000587945 PTHLHP12272 177 aa10.9□□□□□ -0.66
VMP1-206ENST00000587945 CD36P16671 472 aa10.9□□□□□ -0.66
VMP1-206ENST00000587945 BRWD1-AS2P59051 145 aa10.9□□□□□ -0.66
VMP1-206ENST00000587945 TPRA1Q86W33 373 aa10.9□□□□□ -0.66
VMP1-206ENST00000587945 MMD2Q8IY49 270 aa10.9□□□□□ -0.66
VMP1-206ENST00000587945 TTC9CQ8N5M4 171 aa10.9□□□□□ -0.66
VMP1-206ENST00000587945 OR5H6Q8NGV6 325 aa10.9□□□□□ -0.66
VMP1-206ENST00000587945 TCTEX1D2Q8WW35 142 aa10.9□□□□□ -0.66
VMP1-206ENST00000587945 SPIN2AQ99865 258 aa10.9□□□□□ -0.66
VMP1-206ENST00000587945 SPIN2BQ9BPZ2 258 aa10.9□□□□□ -0.66
VMP1-206ENST00000587945 RHBDL2Q9NX52 303 aa10.9□□□□□ -0.66
VMP1-206ENST00000587945 TAS2R8Q9NYW2 309 aa10.9□□□□□ -0.66
VMP1-206ENST00000587945 ANXA10Q9UJ72 324 aa10.9□□□□□ -0.66
VMP1-206ENST00000587945 MRPS7Q9Y2R9 242 aaKnown RBP10.9□□□□□ -0.66
VMP1-206ENST00000587945 FAM223BA6NKX1 122 aa10.89□□□□□ -0.67
VMP1-206ENST00000587945 A8MZ25 164 aa10.89□□□□□ -0.67
VMP1-206ENST00000587945 TEX22C9J3V5 150 aa10.89□□□□□ -0.67
VMP1-206ENST00000587945 E7EUB6 86 aa10.89□□□□□ -0.67
VMP1-206ENST00000587945 CREBL2O60519 120 aaPredicted RBP10.89□□□□□ -0.67
VMP1-206ENST00000587945 OR2A4O95047 310 aa10.89□□□□□ -0.67
VMP1-206ENST00000587945 FCER2P06734 321 aa10.89□□□□□ -0.67
VMP1-206ENST00000587945 LYL1P12980 280 aa10.89□□□□□ -0.67
VMP1-206ENST00000587945 EIF4EBP1Q13541 118 aaPredicted RBP10.89□□□□□ -0.67
VMP1-206ENST00000587945 ADAMTSL5Q6ZMM2 481 aa10.89□□□□□ -0.67
VMP1-206ENST00000587945 FAM223AQ8IWN6 122 aa10.89□□□□□ -0.67
VMP1-206ENST00000587945 GVQW1Q8N7I0 195 aa10.89□□□□□ -0.67
VMP1-206ENST00000587945 FCGR1BQ92637 280 aa10.89□□□□□ -0.67
VMP1-206ENST00000587945 CITED4Q96RK1 184 aa10.89□□□□□ -0.67
VMP1-206ENST00000587945 THAP7Q9BT49 309 aaPredicted RBP10.89□□□□□ -0.67
VMP1-206ENST00000587945 GAR1Q9NY12 217 aaKnown RBP10.89□□□□□ -0.67
VMP1-206ENST00000587945 SIGLEC8Q9NYZ4 499 aa10.89□□□□□ -0.67
VMP1-206ENST00000587945 TRAV18A0A075B6X5 111 aa10.88□□□□□ -0.67
VMP1-206ENST00000587945 LOC100506127A0A0U1RQW1 187 aa10.88□□□□□ -0.67
VMP1-206ENST00000587945 A0A1B0GW64 132 aa10.88□□□□□ -0.67
VMP1-206ENST00000587945 PPP5D1E7EU14 171 aa10.88□□□□□ -0.67
VMP1-206ENST00000587945 TNFSF12O43508 249 aa10.88□□□□□ -0.67
VMP1-206ENST00000587945 SCGNO76038 276 aa10.88□□□□□ -0.67
VMP1-206ENST00000587945 SLC22A5O76082 557 aa10.88□□□□□ -0.67
VMP1-206ENST00000587945 HLA-AP01891 365 aaKnown RBP10.88□□□□□ -0.67
VMP1-206ENST00000587945 IL6RP08887 468 aaPredicted RBP10.88□□□□□ -0.67
VMP1-206ENST00000587945 MYOD1P15172 320 aa10.88□□□□□ -0.67
VMP1-206ENST00000587945 MECP2P51608 486 aaKnown RBP10.88□□□□□ -0.67
VMP1-206ENST00000587945 ZFAND6Q6FIF0 208 aa10.88□□□□□ -0.67
VMP1-206ENST00000587945 SSX9Q7RTT3 188 aa10.88□□□□□ -0.67
VMP1-206ENST00000587945 Q8N402 240 aa10.88□□□□□ -0.67
VMP1-206ENST00000587945 MFSD4AQ8N468 514 aa10.88□□□□□ -0.67
VMP1-206ENST00000587945 OR4S2Q8NH73 311 aa10.88□□□□□ -0.67
VMP1-206ENST00000587945 SLC25A38Q96DW6 304 aa10.88□□□□□ -0.67
VMP1-206ENST00000587945 FYTTD1Q96QD9 318 aaKnown RBP10.88□□□□□ -0.67
VMP1-206ENST00000587945 OR2A7Q96R45 310 aa10.88□□□□□ -0.67
VMP1-206ENST00000587945 HSD17B10Q99714 261 aaKnown RBP10.88□□□□□ -0.67
VMP1-206ENST00000587945 TUBA4BQ9H853 241 aa10.88□□□□□ -0.67
VMP1-206ENST00000587945 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms