RNA–Protein interactions for RNA: ENST00000585967.5

MBD3-204, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-204ENST00000585967 CNIH2Q6PI25 160 aa13.04□□□□□ -0.32
MBD3-204ENST00000585967 ADAD2Q8NCV1 583 aaKnown RBP13.04□□□□□ -0.32
MBD3-204ENST00000585967 OR2K2Q8NGT1 345 aa13.04□□□□□ -0.32
MBD3-204ENST00000585967 ISOC1Q96CN7 298 aa13.04□□□□□ -0.32
MBD3-204ENST00000585967 ST6GALNAC5Q9BVH7 336 aa13.04□□□□□ -0.32
MBD3-204ENST00000585967 SSR3Q9UNL2 185 aa13.04□□□□□ -0.32
MBD3-204ENST00000585967 DPPA5A6NC42 116 aa13.03□□□□□ -0.32
MBD3-204ENST00000585967 LINC00473A8K010 186 aa13.03□□□□□ -0.32
MBD3-204ENST00000585967 FCGR3BO75015 233 aa13.03□□□□□ -0.32
MBD3-204ENST00000585967 SAA1P0DJI8 122 aaPredicted RBP13.03□□□□□ -0.32
MBD3-204ENST00000585967 APELAP0DMC3 54 aa13.03□□□□□ -0.32
MBD3-204ENST00000585967 LYL1P12980 280 aa13.03□□□□□ -0.32
MBD3-204ENST00000585967 SCAND1P57086 179 aa13.03□□□□□ -0.32
MBD3-204ENST00000585967 RHOGP84095 191 aa13.03□□□□□ -0.32
MBD3-204ENST00000585967 ATP5G2Q06055 141 aa13.03□□□□□ -0.32
MBD3-204ENST00000585967 DYRK1AQ13627 763 aa13.03□□□□□ -0.32
MBD3-204ENST00000585967 EXOSC2Q13868 293 aaKnown RBP13.03□□□□□ -0.32
MBD3-204ENST00000585967 UBE2UQ5VVX9 321 aa13.03□□□□□ -0.32
MBD3-204ENST00000585967 IDO2Q6ZQW0 420 aa13.03□□□□□ -0.32
MBD3-204ENST00000585967 NECAP1Q8NC96 275 aa13.03□□□□□ -0.32
MBD3-204ENST00000585967 SPATA25Q9BR10 227 aa13.03□□□□□ -0.32
MBD3-204ENST00000585967 AIFM2Q9BRQ8 373 aa13.03□□□□□ -0.32
MBD3-204ENST00000585967 RBMX2Q9Y388 322 aaKnown RBP13.03□□□□□ -0.32
MBD3-204ENST00000585967 SHISA3A0PJX4 238 aa13.02□□□□□ -0.33
MBD3-204ENST00000585967 SRRM4A7MD48 611 aaKnown RBP13.02□□□□□ -0.33
MBD3-204ENST00000585967 KIR2DS2P43631 304 aa13.02□□□□□ -0.33
MBD3-204ENST00000585967 ARPC4P59998 168 aa13.02□□□□□ -0.33
MBD3-204ENST00000585967 CASC10Q5T4H9 136 aa13.02□□□□□ -0.33
MBD3-204ENST00000585967 HAPLN4Q86UW8 402 aa13.02□□□□□ -0.33
MBD3-204ENST00000585967 LAX1Q8IWV1 398 aa13.02□□□□□ -0.33
MBD3-204ENST00000585967 C5orf30Q96GV9 206 aa13.02□□□□□ -0.33
MBD3-204ENST00000585967 CITED4Q96RK1 184 aa13.02□□□□□ -0.33
MBD3-204ENST00000585967 TM2D3Q9BRN9 247 aa13.02□□□□□ -0.33
MBD3-204ENST00000585967 TUBA4BQ9H853 241 aa13.02□□□□□ -0.33
MBD3-204ENST00000585967 ZNF430Q9H8G1 570 aaPredicted RBP13.02□□□□□ -0.33
MBD3-204ENST00000585967 TXNL4BQ9NX01 149 aaKnown RBP13.02□□□□□ -0.33
MBD3-204ENST00000585967 DAPK2Q9UIK4 370 aa13.02□□□□□ -0.33
MBD3-204ENST00000585967 ZNF257Q9Y2Q1 563 aa13.02□□□□□ -0.33
MBD3-204ENST00000585967 RYR3Q15413 4870 aa13.01□□□□□ -0.33
MBD3-204ENST00000585967 HRASP01112 189 aa13.01□□□□□ -0.33
MBD3-204ENST00000585967 HLA-DQB1P01920 261 aa13.01□□□□□ -0.33
MBD3-204ENST00000585967 IFNA6P05013 189 aa13.01□□□□□ -0.33
MBD3-204ENST00000585967 MAS1LP35410 378 aa13.01□□□□□ -0.33
MBD3-204ENST00000585967 DYNLRB2Q8TF09 96 aa13.01□□□□□ -0.33
MBD3-204ENST00000585967 NUDCD2Q8WVJ2 157 aa13.01□□□□□ -0.33
MBD3-204ENST00000585967 TCTEX1D2Q8WW35 142 aa13.01□□□□□ -0.33
MBD3-204ENST00000585967 KCTD12Q96CX2 325 aaKnown RBP13.01□□□□□ -0.33
MBD3-204ENST00000585967 OR51E2Q9H255 320 aa13.01□□□□□ -0.33
MBD3-204ENST00000585967 ANXA10Q9UJ72 324 aa13.01□□□□□ -0.33
MBD3-204ENST00000585967 RRP15Q9Y3B9 282 aaKnown RBP13.01□□□□□ -0.33
MBD3-204ENST00000585967 TMEM235A6NFC5 223 aa13□□□□□ -0.33
MBD3-204ENST00000585967 J3QRK9 145 aa13□□□□□ -0.33
MBD3-204ENST00000585967 KBTBD11O94819 623 aa13□□□□□ -0.33
MBD3-204ENST00000585967 SNRPBP14678 240 aaKnown RBP13□□□□□ -0.33
MBD3-204ENST00000585967 NFYAP23511 347 aaPredicted RBP13□□□□□ -0.33
MBD3-204ENST00000585967 SFXN4Q6P4A7 337 aa13□□□□□ -0.33
MBD3-204ENST00000585967 ZNF66Q6ZN08 573 aa13□□□□□ -0.33
MBD3-204ENST00000585967 TTC9CQ8N5M4 171 aa13□□□□□ -0.33
MBD3-204ENST00000585967 LGALS14Q8TCE9 139 aa13□□□□□ -0.33
MBD3-204ENST00000585967 OR2A7Q96R45 310 aa13□□□□□ -0.33
MBD3-204ENST00000585967 YTHDF1Q9BYJ9 559 aaKnown RBP13□□□□□ -0.33
MBD3-204ENST00000585967 AKIP1Q9NQ31 210 aa13□□□□□ -0.33
MBD3-204ENST00000585967 RHBDL2Q9NX52 303 aa13□□□□□ -0.33
MBD3-204ENST00000585967 SLC2A8Q9NY64 477 aa13□□□□□ -0.33
MBD3-204ENST00000585967 ETV7Q9Y603 341 aa13□□□□□ -0.33
MBD3-204ENST00000585967 IGKV1D-8A0A087WSZ0 117 aa12.99□□□□□ -0.33
MBD3-204ENST00000585967 A0A0A6YYH2 397 aa12.99□□□□□ -0.33
MBD3-204ENST00000585967 SMIM30A4D0T7 59 aa12.99□□□□□ -0.33
MBD3-204ENST00000585967 A6NJ64 397 aa12.99□□□□□ -0.33
MBD3-204ENST00000585967 DEFA5Q01523 94 aa12.99□□□□□ -0.33
MBD3-204ENST00000585967 OR2B11Q5JQS5 317 aa12.99□□□□□ -0.33
MBD3-204ENST00000585967 SPARTQ8N0X7 666 aa12.99□□□□□ -0.33
MBD3-204ENST00000585967 Q8N1Y9 231 aa12.99□□□□□ -0.33
MBD3-204ENST00000585967 BORCS5Q969J3 196 aa12.99□□□□□ -0.33
MBD3-204ENST00000585967 C19orf73Q9NVV2 129 aa12.99□□□□□ -0.33
MBD3-204ENST00000585967 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.98□□□□□ -0.33
MBD3-204ENST00000585967 TRBV9A0A0B4J1U6 114 aa12.98□□□□□ -0.33
MBD3-204ENST00000585967 TMEM127O75204 238 aa12.98□□□□□ -0.33
MBD3-204ENST00000585967 CSN3P07498 182 aa12.98□□□□□ -0.33
MBD3-204ENST00000585967 RPL27AP46776 148 aaKnown RBP12.98□□□□□ -0.33
MBD3-204ENST00000585967 CATR1Q13166 79 aa12.98□□□□□ -0.33
MBD3-204ENST00000585967 MSMO1Q15800 293 aa12.98□□□□□ -0.33
MBD3-204ENST00000585967 C15orf32Q32M92 178 aa12.98□□□□□ -0.33
MBD3-204ENST00000585967 NR2C2APQ86WQ0 139 aa12.98□□□□□ -0.33
MBD3-204ENST00000585967 SPATA2Q9UM82 520 aa12.98□□□□□ -0.33
MBD3-204ENST00000585967 NPIPB5A8MRT5 1133 aa12.97□□□□□ -0.33
MBD3-204ENST00000585967 CYB5BO43169 146 aa12.97□□□□□ -0.33
MBD3-204ENST00000585967 GGCTO75223 188 aaKnown RBP12.97□□□□□ -0.33
MBD3-204ENST00000585967 TPPPO94811 219 aa12.97□□□□□ -0.33
MBD3-204ENST00000585967 TRBV12-3P01733 135 aa12.97□□□□□ -0.33
MBD3-204ENST00000585967 HIST1H1BP16401 226 aaKnown RBP12.97□□□□□ -0.33
MBD3-204ENST00000585967 MRGPRG-AS1Q2M3A8 158 aa12.97□□□□□ -0.33
MBD3-204ENST00000585967 ZBTB34Q8NCN2 500 aa12.97□□□□□ -0.33
MBD3-204ENST00000585967 BEST4Q8NFU0 473 aa12.97□□□□□ -0.33
MBD3-204ENST00000585967 TMEM167AQ8TBQ9 72 aa12.97□□□□□ -0.33
MBD3-204ENST00000585967 FYTTD1Q96QD9 318 aaKnown RBP12.97□□□□□ -0.33
MBD3-204ENST00000585967 TAS2R8Q9NYW2 309 aa12.97□□□□□ -0.33
MBD3-204ENST00000585967 ELF5Q9UKW6 265 aaPredicted RBP12.97□□□□□ -0.33
MBD3-204ENST00000585967 TENM2Q9NT68 2774 aa12.97□□□□□ -0.33
MBD3-204ENST00000585967 BMPR1BO00238 502 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 143.4 ms