RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 MFSD4AQ8N468 514 aa22.66■■□□□ 1.22
RAB40C-211ENST00000568586 SAMD12Q8N8I0 201 aa22.66■■□□□ 1.22
RAB40C-211ENST00000568586 ZBTB34Q8NCN2 500 aa22.66■■□□□ 1.22
RAB40C-211ENST00000568586 OR5AP2Q8NGF4 316 aa22.66■■□□□ 1.22
RAB40C-211ENST00000568586 GIMAP1Q8WWP7 306 aa22.66■■□□□ 1.22
RAB40C-211ENST00000568586 MSGN1A6NI15 193 aa22.65■■□□□ 1.22
RAB40C-211ENST00000568586 PPYP01298 95 aa22.65■■□□□ 1.22
RAB40C-211ENST00000568586 IGHV3-11P01762 117 aa22.65■■□□□ 1.22
RAB40C-211ENST00000568586 IDO2Q6ZQW0 420 aa22.65■■□□□ 1.22
RAB40C-211ENST00000568586 TINAGL1Q9GZM7 467 aaPredicted RBP22.65■■□□□ 1.22
RAB40C-211ENST00000568586 ZNF430Q9H8G1 570 aaPredicted RBP22.65■■□□□ 1.22
RAB40C-211ENST00000568586 A0A0G2JLM5 398 aa22.64■■□□□ 1.21
RAB40C-211ENST00000568586 CREBL2O60519 120 aaPredicted RBP22.64■■□□□ 1.21
RAB40C-211ENST00000568586 SLURP1P55000 103 aa22.64■■□□□ 1.21
RAB40C-211ENST00000568586 NCS1P62166 190 aa22.64■■□□□ 1.21
RAB40C-211ENST00000568586 ZNF429Q86V71 674 aa22.64■■□□□ 1.21
RAB40C-211ENST00000568586 OR4S2Q8NH73 311 aa22.64■■□□□ 1.21
RAB40C-211ENST00000568586 SRSF12Q8WXF0 261 aaKnown RBP22.64■■□□□ 1.21
RAB40C-211ENST00000568586 CMTM3Q96MX0 182 aa22.64■■□□□ 1.21
RAB40C-211ENST00000568586 NAT1P18440 290 aa22.63■■□□□ 1.21
RAB40C-211ENST00000568586 TAS2R20P59543 309 aa22.63■■□□□ 1.21
RAB40C-211ENST00000568586 TNXAQ16473 311 aa22.63■■□□□ 1.21
RAB40C-211ENST00000568586 MMD2Q8IY49 270 aa22.63■■□□□ 1.21
RAB40C-211ENST00000568586 ADAD2Q8NCV1 583 aaKnown RBP22.63■■□□□ 1.21
RAB40C-211ENST00000568586 TCTEX1D2Q8WW35 142 aa22.63■■□□□ 1.21
RAB40C-211ENST00000568586 DCUN1D5Q9BTE7 237 aa22.63■■□□□ 1.21
RAB40C-211ENST00000568586 CCL28Q9NRJ3 127 aa22.63■■□□□ 1.21
RAB40C-211ENST00000568586 ZNF355PQ9NSJ1 428 aa22.63■■□□□ 1.21
RAB40C-211ENST00000568586 TAS2R8Q9NYW2 309 aa22.63■■□□□ 1.21
RAB40C-211ENST00000568586 LSM4Q9Y4Z0 139 aaKnown RBP22.63■■□□□ 1.21
RAB40C-211ENST00000568586 TMEM69Q5SWH9 247 aa22.62■■□□□ 1.21
RAB40C-211ENST00000568586 DHRS11Q6UWP2 260 aa22.62■■□□□ 1.21
RAB40C-211ENST00000568586 SMIM18P0DKX4 95 aa22.61■■□□□ 1.21
RAB40C-211ENST00000568586 ECI1P42126 302 aa22.61■■□□□ 1.21
RAB40C-211ENST00000568586 KIR2DS2P43631 304 aa22.61■■□□□ 1.21
RAB40C-211ENST00000568586 OR2B11Q5JQS5 317 aa22.61■■□□□ 1.21
RAB40C-211ENST00000568586 ACSM6Q6P461 480 aa22.61■■□□□ 1.21
RAB40C-211ENST00000568586 PUSL1Q8N0Z8 303 aaKnown RBP22.61■■□□□ 1.21
RAB40C-211ENST00000568586 VSTM2AQ8TAG5 236 aa22.61■■□□□ 1.21
RAB40C-211ENST00000568586 SECTM1Q8WVN6 248 aa22.61■■□□□ 1.21
RAB40C-211ENST00000568586 USMG5Q96IX5 58 aa22.61■■□□□ 1.21
RAB40C-211ENST00000568586 B9D2Q9BPU9 175 aa22.61■■□□□ 1.21
RAB40C-211ENST00000568586 RANGRFQ9HD47 186 aaPredicted RBP22.61■■□□□ 1.21
RAB40C-211ENST00000568586 SORL1Q92673 2214 aa22.6■■□□□ 1.21
RAB40C-211ENST00000568586 C13orf42A0A1B0GVH6 325 aa22.6■■□□□ 1.21
RAB40C-211ENST00000568586 RBFOX2O43251 390 aaKnown RBP eCLIP22.6■■□□□ 1.212e-11■■□□□ 12.3
RAB40C-211ENST00000568586 OR9G9P0C7N8 305 aa22.6■■□□□ 1.21
RAB40C-211ENST00000568586 VBP1P61758 197 aa22.6■■□□□ 1.21
RAB40C-211ENST00000568586 TMEM167AQ8TBQ9 72 aa22.6■■□□□ 1.21
RAB40C-211ENST00000568586 SPIN2AQ99865 258 aa22.6■■□□□ 1.21
RAB40C-211ENST00000568586 SPIN2BQ9BPZ2 258 aa22.6■■□□□ 1.21
RAB40C-211ENST00000568586 OR2A4O95047 310 aa22.59■■□□□ 1.21
RAB40C-211ENST00000568586 APOA1P02647 267 aa22.59■■□□□ 1.21
RAB40C-211ENST00000568586 ZNF343Q6P1L6 599 aa22.59■■□□□ 1.21
RAB40C-211ENST00000568586 VKORC1L1Q8N0U8 176 aa22.59■■□□□ 1.21
RAB40C-211ENST00000568586 ACOT12Q8WYK0 555 aa22.59■■□□□ 1.21
RAB40C-211ENST00000568586 OR2A7Q96R45 310 aa22.59■■□□□ 1.21
RAB40C-211ENST00000568586 GPHA2Q96T91 129 aa22.59■■□□□ 1.21
RAB40C-211ENST00000568586 PHB2Q99623 299 aa22.59■■□□□ 1.21
RAB40C-211ENST00000568586 SLC5A7Q9GZV3 580 aa22.59■■□□□ 1.21
RAB40C-211ENST00000568586 IFT46Q9NQC8 304 aa22.59■■□□□ 1.21
RAB40C-211ENST00000568586 ZNF256Q9Y2P7 627 aaPredicted RBP22.59■■□□□ 1.21
RAB40C-211ENST00000568586 MEIS3P1A6NDR6 274 aa22.58■■□□□ 1.21
RAB40C-211ENST00000568586 ACTL6BO94805 426 aa22.58■■□□□ 1.21
RAB40C-211ENST00000568586 KBTBD11O94819 623 aa22.58■■□□□ 1.21
RAB40C-211ENST00000568586 EIF4EP06730 217 aaKnown RBP22.58■■□□□ 1.21
RAB40C-211ENST00000568586 FCER2P06734 321 aa22.58■■□□□ 1.21
RAB40C-211ENST00000568586 DYRK1AQ13627 763 aa22.58■■□□□ 1.21
RAB40C-211ENST00000568586 ANKRD13BQ86YJ7 626 aa22.58■■□□□ 1.21
RAB40C-211ENST00000568586 TTC9CQ8N5M4 171 aa22.58■■□□□ 1.21
RAB40C-211ENST00000568586 TRBV9A0A0B4J1U6 114 aa22.57■■□□□ 1.2
RAB40C-211ENST00000568586 RBMXL2O75526 392 aaKnown RBP22.57■■□□□ 1.2
RAB40C-211ENST00000568586 HRASP01112 189 aa22.57■■□□□ 1.2
RAB40C-211ENST00000568586 PRSS3P35030 304 aa22.57■■□□□ 1.2
RAB40C-211ENST00000568586 MAS1LP35410 378 aa22.57■■□□□ 1.2
RAB40C-211ENST00000568586 PRR25Q96S07 402 aa22.57■■□□□ 1.2
RAB40C-211ENST00000568586 COA4Q9NYJ1 87 aa22.57■■□□□ 1.2
RAB40C-211ENST00000568586 GABARAPO95166 117 aa22.56■■□□□ 1.2
RAB40C-211ENST00000568586 ZP3P21754 424 aa22.56■■□□□ 1.2
RAB40C-211ENST00000568586 CTF1Q16619 201 aa22.56■■□□□ 1.2
RAB40C-211ENST00000568586 GPX8Q8TED1 209 aa22.56■■□□□ 1.2
RAB40C-211ENST00000568586 AIFM2Q9BRQ8 373 aa22.56■■□□□ 1.2
RAB40C-211ENST00000568586 COMMD3Q9UBI1 195 aa22.56■■□□□ 1.2
RAB40C-211ENST00000568586 ADAM30Q9UKF2 790 aa22.56■■□□□ 1.2
RAB40C-211ENST00000568586 TNFSF12O43508 249 aa22.55■■□□□ 1.2
RAB40C-211ENST00000568586 SAP30O75446 220 aa22.55■■□□□ 1.2
RAB40C-211ENST00000568586 APELAP0DMC3 54 aa22.55■■□□□ 1.2
RAB40C-211ENST00000568586 GNRHRP30968 328 aa22.55■■□□□ 1.2
RAB40C-211ENST00000568586 TAS2R46P59540 309 aa22.55■■□□□ 1.2
RAB40C-211ENST00000568586 KLF5Q13887 457 aaPredicted RBP22.55■■□□□ 1.2
RAB40C-211ENST00000568586 C10orf55Q5SWW7 151 aa22.55■■□□□ 1.2
RAB40C-211ENST00000568586 ZNF818PQ6ZRF7 136 aa22.55■■□□□ 1.2
RAB40C-211ENST00000568586 LYSMD2Q8IV50 215 aa22.55■■□□□ 1.2
RAB40C-211ENST00000568586 BORCS5Q969J3 196 aa22.55■■□□□ 1.2
RAB40C-211ENST00000568586 EHFQ9NZC4 300 aa22.55■■□□□ 1.2
RAB40C-211ENST00000568586 TEX22C9J3V5 150 aa22.54■■□□□ 1.2
RAB40C-211ENST00000568586 RFX2P48378 723 aa22.54■■□□□ 1.2
RAB40C-211ENST00000568586 RORCP51449 518 aa22.54■■□□□ 1.2
RAB40C-211ENST00000568586 FXYD4P59646 89 aa22.54■■□□□ 1.2
RAB40C-211ENST00000568586 POU2AF1Q16633 256 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms