RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 SOX8P57073 446 aa11.86□□□□□ -0.51
CDH1-209ENST00000566510 Q6ZT83 130 aa11.86□□□□□ -0.51
CDH1-209ENST00000566510 OR5R1Q8NH85 324 aa11.86□□□□□ -0.51
CDH1-209ENST00000566510 COLQQ9Y215 455 aaPredicted RBP11.86□□□□□ -0.51
CDH1-209ENST00000566510 RP1L1Q8IWN7 2480 aaPredicted RBP11.86□□□□□ -0.51
CDH1-209ENST00000566510 A0A0U1RQK1 487 aa11.85□□□□□ -0.51
CDH1-209ENST00000566510 ZNF320A2RRD8 509 aa11.85□□□□□ -0.51
CDH1-209ENST00000566510 GNB1P62873 340 aa11.85□□□□□ -0.51
CDH1-209ENST00000566510 PDLIM3Q53GG5 364 aaPredicted RBP11.85□□□□□ -0.51
CDH1-209ENST00000566510 VWA1Q6PCB0 445 aa11.85□□□□□ -0.51
CDH1-209ENST00000566510 MRPL41Q8IXM3 137 aaKnown RBP11.85□□□□□ -0.51
CDH1-209ENST00000566510 LRRC29Q8WV35 223 aa11.85□□□□□ -0.51
CDH1-209ENST00000566510 TMEM170AQ8WVE7 144 aa11.85□□□□□ -0.51
CDH1-209ENST00000566510 OR6C3Q9NZP0 311 aa11.85□□□□□ -0.51
CDH1-209ENST00000566510 M0R1X1 148 aa11.85□□□□□ -0.51
CDH1-209ENST00000566510 VENTXO95231 258 aa11.85□□□□□ -0.51
CDH1-209ENST00000566510 VWC2Q2TAL6 325 aa11.85□□□□□ -0.51
CDH1-209ENST00000566510 HES3Q5TGS1 186 aa11.85□□□□□ -0.51
CDH1-209ENST00000566510 REC114Q7Z4M0 266 aa11.85□□□□□ -0.51
CDH1-209ENST00000566510 LURAP1Q96LR2 239 aa11.85□□□□□ -0.51
CDH1-209ENST00000566510 TET2Q6N021 2002 aaPredicted RBP11.85□□□□□ -0.51
CDH1-209ENST00000566510 C1QTNF9P0C862 333 aa11.84□□□□□ -0.51
CDH1-209ENST00000566510 CD59P13987 128 aa11.84□□□□□ -0.51
CDH1-209ENST00000566510 CD82P27701 267 aa11.84□□□□□ -0.51
CDH1-209ENST00000566510 SRP14P37108 136 aaKnown RBP11.84□□□□□ -0.51
CDH1-209ENST00000566510 ACTL10Q5JWF8 245 aa11.84□□□□□ -0.51
CDH1-209ENST00000566510 LINC01551Q86U37 167 aa11.84□□□□□ -0.51
CDH1-209ENST00000566510 CD177Q8N6Q3 437 aa11.84□□□□□ -0.51
CDH1-209ENST00000566510 OR2Z1Q8NG97 314 aa11.84□□□□□ -0.51
CDH1-209ENST00000566510 ACY3Q96HD9 319 aa11.84□□□□□ -0.51
CDH1-209ENST00000566510 ZDHHC11Q9H8X9 412 aa11.84□□□□□ -0.51
CDH1-209ENST00000566510 RRHO14718 337 aa11.84□□□□□ -0.51
CDH1-209ENST00000566510 PDE6DO43924 150 aa11.84□□□□□ -0.51
CDH1-209ENST00000566510 PRDX2P32119 198 aa11.84□□□□□ -0.51
CDH1-209ENST00000566510 USF2Q15853 346 aaPredicted RBP11.84□□□□□ -0.51
CDH1-209ENST00000566510 RPL39P5Q59GN2 51 aa11.84□□□□□ -0.51
CDH1-209ENST00000566510 TCTEX1D1Q8N7M0 179 aa11.84□□□□□ -0.51
CDH1-209ENST00000566510 DUSP13Q9UII6 198 aa11.84□□□□□ -0.51
CDH1-209ENST00000566510 WDR83OSQ9Y284 106 aa11.84□□□□□ -0.51
CDH1-209ENST00000566510 PTPRBP23467 1997 aa11.84□□□□□ -0.51
CDH1-209ENST00000566510 GGCTO75223 188 aaKnown RBP11.83□□□□□ -0.51
CDH1-209ENST00000566510 CECR9P0C854 216 aa11.83□□□□□ -0.51
CDH1-209ENST00000566510 ARL14EPLP0DKL9 152 aa11.83□□□□□ -0.51
CDH1-209ENST00000566510 DUTP33316 252 aaKnown RBP11.83□□□□□ -0.51
CDH1-209ENST00000566510 CCL11P51671 97 aa11.83□□□□□ -0.51
CDH1-209ENST00000566510 ZNF718Q3SXZ3 478 aa11.83□□□□□ -0.51
CDH1-209ENST00000566510 DNLZQ5SXM8 178 aa11.83□□□□□ -0.51
CDH1-209ENST00000566510 ABHD12Q8N2K0 398 aa11.83□□□□□ -0.51
CDH1-209ENST00000566510 TRAPPC1Q9Y5R8 145 aa11.83□□□□□ -0.51
CDH1-209ENST00000566510 IGHV3OR15-7A0A075B7D8 119 aa11.83□□□□□ -0.52
CDH1-209ENST00000566510 RNF224P0DH78 156 aa11.83□□□□□ -0.52
CDH1-209ENST00000566510 IL3RAP26951 378 aa11.83□□□□□ -0.52
CDH1-209ENST00000566510 ERVK-16P61578 105 aa11.83□□□□□ -0.52
CDH1-209ENST00000566510 MIC13Q5XKP0 118 aa11.83□□□□□ -0.52
CDH1-209ENST00000566510 ZNF664Q8N3J9 261 aa11.83□□□□□ -0.52
CDH1-209ENST00000566510 CISD2Q8N5K1 135 aaKnown RBP11.83□□□□□ -0.52
CDH1-209ENST00000566510 ZNF114Q8NC26 417 aa11.83□□□□□ -0.52
CDH1-209ENST00000566510 PRR7Q8TB68 274 aa11.83□□□□□ -0.52
CDH1-209ENST00000566510 RNASEH2CQ8TDP1 164 aaKnown RBP11.83□□□□□ -0.52
CDH1-209ENST00000566510 SSMEM1Q8WWF3 244 aa11.83□□□□□ -0.52
CDH1-209ENST00000566510 TMEM18Q96B42 140 aa11.83□□□□□ -0.52
CDH1-209ENST00000566510 GUCD1Q96NT3 240 aa11.83□□□□□ -0.52
CDH1-209ENST00000566510 MAP1BP46821 2468 aaKnown RBP11.83□□□□□ -0.52
CDH1-209ENST00000566510 PROP1O75360 226 aa11.83□□□□□ -0.52
CDH1-209ENST00000566510 IGKV3-15P01624 115 aa11.83□□□□□ -0.52
CDH1-209ENST00000566510 ADH4P08319 380 aa11.83□□□□□ -0.52
CDH1-209ENST00000566510 CNN1P51911 297 aaKnown RBP11.83□□□□□ -0.52
CDH1-209ENST00000566510 RPP30P78346 268 aaKnown RBP11.83□□□□□ -0.52
CDH1-209ENST00000566510 TREML4Q6UXN2 200 aa11.83□□□□□ -0.52
CDH1-209ENST00000566510 Q8N7P7 452 aa11.83□□□□□ -0.52
CDH1-209ENST00000566510 BDP1A6H8Y1 2624 aa11.82□□□□□ -0.52
CDH1-209ENST00000566510 TRAV3A0A0B4J244 114 aa11.82□□□□□ -0.52
CDH1-209ENST00000566510 HPRT1P00492 218 aa11.82□□□□□ -0.52
CDH1-209ENST00000566510 TNFSF10P50591 281 aa11.82□□□□□ -0.52
CDH1-209ENST00000566510 SGMS2Q8NHU3 365 aa11.82□□□□□ -0.52
CDH1-209ENST00000566510 LEAP2Q969E1 77 aa11.82□□□□□ -0.52
CDH1-209ENST00000566510 CLCF1Q9UBD9 225 aa11.82□□□□□ -0.52
CDH1-209ENST00000566510 C15orf65H3BRN8 121 aa11.82□□□□□ -0.52
CDH1-209ENST00000566510 IFNL4K9M1U5 179 aa11.82□□□□□ -0.52
CDH1-209ENST00000566510 MORN2Q502X0 79 aa11.82□□□□□ -0.52
CDH1-209ENST00000566510 WDR31Q8NA23 367 aa11.82□□□□□ -0.52
CDH1-209ENST00000566510 ZNRF1Q8ND25 227 aa11.82□□□□□ -0.52
CDH1-209ENST00000566510 MS4A5Q9H3V2 200 aa11.82□□□□□ -0.52
CDH1-209ENST00000566510 KCNIP2Q9NS61 270 aa11.82□□□□□ -0.52
CDH1-209ENST00000566510 PXMP4Q9Y6I8 212 aa11.82□□□□□ -0.52
CDH1-209ENST00000566510 A0A1B0GUS0 222 aa11.81□□□□□ -0.52
CDH1-209ENST00000566510 F6UZH7 168 aa11.81□□□□□ -0.52
CDH1-209ENST00000566510 CDX4O14627 284 aaPredicted RBP11.81□□□□□ -0.52
CDH1-209ENST00000566510 SPCS3P61009 180 aa11.81□□□□□ -0.52
CDH1-209ENST00000566510 HTD2P86397 168 aa11.81□□□□□ -0.52
CDH1-209ENST00000566510 COA6Q5JTJ3 125 aaKnown RBP11.81□□□□□ -0.52
CDH1-209ENST00000566510 S1PR3Q99500 378 aa11.81□□□□□ -0.52
CDH1-209ENST00000566510 YLPM1P49750 1951 aaKnown RBP11.81□□□□□ -0.52
CDH1-209ENST00000566510 MDFIC2A0A1B0GVS7 189 aa11.81□□□□□ -0.52
CDH1-209ENST00000566510 SCGB1D1O95968 90 aa11.81□□□□□ -0.52
CDH1-209ENST00000566510 GCGP01275 180 aa11.81□□□□□ -0.52
CDH1-209ENST00000566510 KIR2DL2P43627 348 aaPredicted RBP11.81□□□□□ -0.52
CDH1-209ENST00000566510 C9orf106Q8NAJ2 232 aa11.81□□□□□ -0.52
CDH1-209ENST00000566510 SFRP2Q96HF1 295 aa11.81□□□□□ -0.52
CDH1-209ENST00000566510 MGST2Q99735 147 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms