RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 TNFRSF9Q07011 255 aa13.75□□□□□ -0.21
RAB40C-210ENST00000566290 NCR3LG1Q68D85 454 aa13.75□□□□□ -0.21
RAB40C-210ENST00000566290 STX12Q86Y82 276 aa13.75□□□□□ -0.21
RAB40C-210ENST00000566290 OR52E5Q8NH55 327 aa13.75□□□□□ -0.21
RAB40C-210ENST00000566290 HIPK2Q9H2X6 1198 aa13.75□□□□□ -0.21
RAB40C-210ENST00000566290 CUBNO60494 3623 aa13.74□□□□□ -0.21
RAB40C-210ENST00000566290 A8MXK9 166 aa13.74□□□□□ -0.21
RAB40C-210ENST00000566290 M0R1X1 148 aa13.74□□□□□ -0.21
RAB40C-210ENST00000566290 DVL1O14640 695 aa13.74□□□□□ -0.21
RAB40C-210ENST00000566290 CHST1O43916 411 aa13.74□□□□□ -0.21
RAB40C-210ENST00000566290 SPP1P10451 314 aa13.74□□□□□ -0.21
RAB40C-210ENST00000566290 CDKN1AP38936 164 aa13.74□□□□□ -0.21
RAB40C-210ENST00000566290 ZNF273Q14593 569 aa13.74□□□□□ -0.21
RAB40C-210ENST00000566290 Q5PR19 223 aa13.74□□□□□ -0.21
RAB40C-210ENST00000566290 TMEM200BQ69YZ2 307 aa13.74□□□□□ -0.21
RAB40C-210ENST00000566290 FAM53AQ6NSI3 398 aaPredicted RBP13.74□□□□□ -0.21
RAB40C-210ENST00000566290 UQCC3Q6UW78 93 aa13.74□□□□□ -0.21
RAB40C-210ENST00000566290 ZNF833PQ6ZTB9 187 aa13.74□□□□□ -0.21
RAB40C-210ENST00000566290 PUSL1Q8N0Z8 303 aaKnown RBP13.74□□□□□ -0.21
RAB40C-210ENST00000566290 LRRC75A-AS1Q8N1F1 130 aa13.74□□□□□ -0.21
RAB40C-210ENST00000566290 S1PR3Q99500 378 aa13.74□□□□□ -0.21
RAB40C-210ENST00000566290 AIFM2Q9BRQ8 373 aa13.74□□□□□ -0.21
RAB40C-210ENST00000566290 SESN1Q9Y6P5 492 aa13.74□□□□□ -0.21
RAB40C-210ENST00000566290 SAA2-SAA4A0A096LPE2 208 aa13.73□□□□□ -0.21
RAB40C-210ENST00000566290 A0A1W2PPH5 198 aa13.73□□□□□ -0.21
RAB40C-210ENST00000566290 RAB19A4D1S5 217 aa13.73□□□□□ -0.21
RAB40C-210ENST00000566290 OVOL3O00110 214 aa13.73□□□□□ -0.21
RAB40C-210ENST00000566290 SAA2P0DJI9 122 aaPredicted RBP13.73□□□□□ -0.21
RAB40C-210ENST00000566290 NQO2P16083 231 aa13.73□□□□□ -0.21
RAB40C-210ENST00000566290 EPHA1P21709 976 aa13.73□□□□□ -0.21
RAB40C-210ENST00000566290 CAV2P51636 162 aa13.73□□□□□ -0.21
RAB40C-210ENST00000566290 BLOC1S1P78537 153 aa13.73□□□□□ -0.21
RAB40C-210ENST00000566290 AANATQ16613 207 aa13.73□□□□□ -0.21
RAB40C-210ENST00000566290 H2BFWTQ7Z2G1 175 aa13.73□□□□□ -0.21
RAB40C-210ENST00000566290 ZNF429Q86V71 674 aa13.73□□□□□ -0.21
RAB40C-210ENST00000566290 TMED6Q8WW62 240 aa13.73□□□□□ -0.21
RAB40C-210ENST00000566290 R3HDM4Q96D70 268 aa13.73□□□□□ -0.21
RAB40C-210ENST00000566290 MIOXQ9UGB7 285 aa13.73□□□□□ -0.21
RAB40C-210ENST00000566290 FAM24AA6NFZ4 105 aa13.72□□□□□ -0.21
RAB40C-210ENST00000566290 SLC31A2O15432 143 aa13.72□□□□□ -0.21
RAB40C-210ENST00000566290 NDUFS7O75251 213 aa13.72□□□□□ -0.21
RAB40C-210ENST00000566290 CRLF1O75462 422 aa13.72□□□□□ -0.21
RAB40C-210ENST00000566290 OR8U8P0C7N1 319 aa13.72□□□□□ -0.21
RAB40C-210ENST00000566290 PAX1P15863 534 aa13.72□□□□□ -0.21
RAB40C-210ENST00000566290 OMGP23515 440 aa13.72□□□□□ -0.21
RAB40C-210ENST00000566290 UBE2KP61086 200 aa13.72□□□□□ -0.21
RAB40C-210ENST00000566290 LYPD2Q6UXB3 125 aa13.72□□□□□ -0.21
RAB40C-210ENST00000566290 BTNL3Q6UXE8 466 aa13.72□□□□□ -0.21
RAB40C-210ENST00000566290 ZNF841Q6ZN19 808 aa13.72□□□□□ -0.21
RAB40C-210ENST00000566290 LYPD6BQ8NI32 183 aa13.72□□□□□ -0.21
RAB40C-210ENST00000566290 GNPNAT1Q96EK6 184 aaPredicted RBP13.72□□□□□ -0.21
RAB40C-210ENST00000566290 TIMD4Q96H15 378 aa13.72□□□□□ -0.21
RAB40C-210ENST00000566290 CXorf58Q96LI9 332 aa13.72□□□□□ -0.21
RAB40C-210ENST00000566290 Q96MF0 132 aa13.72□□□□□ -0.21
RAB40C-210ENST00000566290 TSNAXQ99598 290 aaKnown RBP13.72□□□□□ -0.21
RAB40C-210ENST00000566290 PARP11Q9NR21 331 aa13.72□□□□□ -0.21
RAB40C-210ENST00000566290 STRAPQ9Y3F4 350 aaKnown RBP13.72□□□□□ -0.21
RAB40C-210ENST00000566290 UMAD1C9J7I0 102 aa13.71□□□□□ -0.21
RAB40C-210ENST00000566290 TRIM77I1YAP6 450 aa13.71□□□□□ -0.21
RAB40C-210ENST00000566290 WIPF1O43516 503 aa13.71□□□□□ -0.21
RAB40C-210ENST00000566290 KRASP01116 189 aa13.71□□□□□ -0.21
RAB40C-210ENST00000566290 G6PCP35575 357 aa13.71□□□□□ -0.21
RAB40C-210ENST00000566290 ERVK-16P61578 105 aa13.71□□□□□ -0.21
RAB40C-210ENST00000566290 HBG1P69891 147 aa13.71□□□□□ -0.21
RAB40C-210ENST00000566290 HBG2P69892 147 aa13.71□□□□□ -0.21
RAB40C-210ENST00000566290 NHLH2Q02577 135 aa13.71□□□□□ -0.21
RAB40C-210ENST00000566290 ZNF816Q0VGE8 651 aaPredicted RBP13.71□□□□□ -0.21
RAB40C-210ENST00000566290 LTC4SQ16873 150 aa13.71□□□□□ -0.21
RAB40C-210ENST00000566290 FAM74A1Q5RGS3 127 aa13.71□□□□□ -0.21
RAB40C-210ENST00000566290 PRAMEF5Q5TYX0 476 aa13.71□□□□□ -0.21
RAB40C-210ENST00000566290 TMEM14EPQ6UXP3 125 aa13.71□□□□□ -0.21
RAB40C-210ENST00000566290 IL34Q6ZMJ4 242 aa13.71□□□□□ -0.21
RAB40C-210ENST00000566290 RAB1CQ92928 201 aa13.71□□□□□ -0.21
RAB40C-210ENST00000566290 TMEM186Q96B77 213 aa13.71□□□□□ -0.21
RAB40C-210ENST00000566290 CITED4Q96RK1 184 aa13.71□□□□□ -0.21
RAB40C-210ENST00000566290 ATP5SQ99766 215 aa13.71□□□□□ -0.21
RAB40C-210ENST00000566290 PCGF1Q9BSM1 259 aa13.71□□□□□ -0.21
RAB40C-210ENST00000566290 MAGT1Q9H0U3 335 aa13.71□□□□□ -0.21
RAB40C-210ENST00000566290 WFDC1Q9HC57 220 aa13.71□□□□□ -0.21
RAB40C-210ENST00000566290 KRBOX1C9JBD0 128 aa13.7□□□□□ -0.22
RAB40C-210ENST00000566290 FCGR3BO75015 233 aa13.7□□□□□ -0.22
RAB40C-210ENST00000566290 IL6RP08887 468 aaPredicted RBP13.7□□□□□ -0.22
RAB40C-210ENST00000566290 RPL39P5Q59GN2 51 aa13.7□□□□□ -0.22
RAB40C-210ENST00000566290 TOR2AQ5JU69 321 aa13.7□□□□□ -0.22
RAB40C-210ENST00000566290 COMMD1Q8N668 190 aa13.7□□□□□ -0.22
RAB40C-210ENST00000566290 OR1S2Q8NGQ3 325 aa13.7□□□□□ -0.22
RAB40C-210ENST00000566290 OR9G1Q8NH87 305 aa13.7□□□□□ -0.22
RAB40C-210ENST00000566290 NEIL1Q96FI4 390 aaPredicted RBP13.7□□□□□ -0.22
RAB40C-210ENST00000566290 CHODLQ9H9P2 273 aa13.7□□□□□ -0.22
RAB40C-210ENST00000566290 PPIHO43447 177 aaKnown RBP13.69□□□□□ -0.22
RAB40C-210ENST00000566290 MMP23AO75900 390 aa13.69□□□□□ -0.22
RAB40C-210ENST00000566290 HRASP01112 189 aa13.69□□□□□ -0.22
RAB40C-210ENST00000566290 ZP3P21754 424 aa13.69□□□□□ -0.22
RAB40C-210ENST00000566290 COL8A2P25067 703 aa13.69□□□□□ -0.22
RAB40C-210ENST00000566290 ATP5J2P56134 94 aa13.69□□□□□ -0.22
RAB40C-210ENST00000566290 SPCS3P61009 180 aa13.69□□□□□ -0.22
RAB40C-210ENST00000566290 ATP6V1FQ16864 119 aa13.69□□□□□ -0.22
RAB40C-210ENST00000566290 RTL8BQ17RB0 113 aa13.69□□□□□ -0.22
RAB40C-210ENST00000566290 DPPA3Q6W0C5 159 aa13.69□□□□□ -0.22
RAB40C-210ENST00000566290 LYG1Q8N1E2 194 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms