RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 OR2T6Q8NHC8 308 aa14.96□□□□□ -0.01
RAB40C-207ENST00000563109 VSTM2AQ8TAG5 236 aa14.96□□□□□ -0.01
RAB40C-207ENST00000563109 ENKURQ8TC29 256 aa14.96□□□□□ -0.01
RAB40C-207ENST00000563109 FBXL15Q9H469 300 aa14.96□□□□□ -0.01
RAB40C-207ENST00000563109 KCNIP3Q9Y2W7 256 aa14.96□□□□□ -0.01
RAB40C-207ENST00000563109 JMJD1CQ15652 2540 aa14.96□□□□□ -0.02
RAB40C-207ENST00000563109 SH2D7A6NKC9 451 aaPredicted RBP14.95□□□□□ -0.02
RAB40C-207ENST00000563109 CREBL2O60519 120 aaPredicted RBP14.95□□□□□ -0.02
RAB40C-207ENST00000563109 TSPAN9O75954 239 aa14.95□□□□□ -0.02
RAB40C-207ENST00000563109 IGLV2-23P01705 113 aa14.95□□□□□ -0.02
RAB40C-207ENST00000563109 AMY1AP04745 511 aa14.95□□□□□ -0.02
RAB40C-207ENST00000563109 VSIG10L2P0DP72 767 aa14.95□□□□□ -0.02
RAB40C-207ENST00000563109 ANXA3P12429 323 aa14.95□□□□□ -0.02
RAB40C-207ENST00000563109 NQO2P16083 231 aa14.95□□□□□ -0.02
RAB40C-207ENST00000563109 SLC6A1P30531 599 aa14.95□□□□□ -0.02
RAB40C-207ENST00000563109 BLCAPP62952 87 aa14.95□□□□□ -0.02
RAB40C-207ENST00000563109 TRIM16LQ309B1 348 aa14.95□□□□□ -0.02
RAB40C-207ENST00000563109 TP53RKQ96S44 253 aa14.95□□□□□ -0.02
RAB40C-207ENST00000563109 ZNF702PQ9H963 129 aa14.95□□□□□ -0.02
RAB40C-207ENST00000563109 SRRM4A7MD48 611 aaKnown RBP14.94□□□□□ -0.02
RAB40C-207ENST00000563109 ARPC1BO15143 372 aaKnown RBP14.94□□□□□ -0.02
RAB40C-207ENST00000563109 KCNAB3O43448 404 aa14.94□□□□□ -0.02
RAB40C-207ENST00000563109 ATG12O94817 140 aa14.94□□□□□ -0.02
RAB40C-207ENST00000563109 HLA-DRB1P01911 266 aa14.94□□□□□ -0.02
RAB40C-207ENST00000563109 SAA1P0DJI8 122 aaPredicted RBP14.94□□□□□ -0.02
RAB40C-207ENST00000563109 RPA2P15927 270 aa14.94□□□□□ -0.02
RAB40C-207ENST00000563109 RELBQ01201 579 aa14.94□□□□□ -0.02
RAB40C-207ENST00000563109 DHODHQ02127 395 aa14.94□□□□□ -0.02
RAB40C-207ENST00000563109 LIN54Q6MZP7 749 aa14.94□□□□□ -0.02
RAB40C-207ENST00000563109 TEX45Q8NA69 505 aa14.94□□□□□ -0.02
RAB40C-207ENST00000563109 DMBX1Q8NFW5 382 aa14.94□□□□□ -0.02
RAB40C-207ENST00000563109 TMEM230Q96A57 120 aa14.94□□□□□ -0.02
RAB40C-207ENST00000563109 R3HDM4Q96D70 268 aa14.94□□□□□ -0.02
RAB40C-207ENST00000563109 RHOVQ96L33 236 aa14.94□□□□□ -0.02
RAB40C-207ENST00000563109 C19orf24Q9BVV8 132 aa14.94□□□□□ -0.02
RAB40C-207ENST00000563109 C20orf85Q9H1P6 137 aa14.94□□□□□ -0.02
RAB40C-207ENST00000563109 BEX1Q9HBH7 125 aa14.94□□□□□ -0.02
RAB40C-207ENST00000563109 PALMDQ9NP74 551 aa14.94□□□□□ -0.02
RAB40C-207ENST00000563109 SIGLEC9Q9Y336 463 aa14.94□□□□□ -0.02
RAB40C-207ENST00000563109 TCRBP04435 133 aa14.93□□□□□ -0.02
RAB40C-207ENST00000563109 OR5AC1P0C628 307 aa14.93□□□□□ -0.02
RAB40C-207ENST00000563109 VDAC2P45880 294 aaPredicted RBP14.93□□□□□ -0.02
RAB40C-207ENST00000563109 UBE2MP61081 183 aaKnown RBP14.93□□□□□ -0.02
RAB40C-207ENST00000563109 FOXL1Q12952 345 aa14.93□□□□□ -0.02
RAB40C-207ENST00000563109 SP6Q3SY56 376 aa14.93□□□□□ -0.02
RAB40C-207ENST00000563109 ZNF585BQ52M93 769 aa14.93□□□□□ -0.02
RAB40C-207ENST00000563109 TMEM128Q5BJH2 165 aa14.93□□□□□ -0.02
RAB40C-207ENST00000563109 SSX9Q7RTT3 188 aa14.93□□□□□ -0.02
RAB40C-207ENST00000563109 SLC35E3Q7Z769 313 aa14.93□□□□□ -0.02
RAB40C-207ENST00000563109 PPP1R27Q86WC6 154 aa14.93□□□□□ -0.02
RAB40C-207ENST00000563109 VKORC1L1Q8N0U8 176 aa14.93□□□□□ -0.02
RAB40C-207ENST00000563109 Q8N2B8 174 aa14.93□□□□□ -0.02
RAB40C-207ENST00000563109 TAF15Q92804 592 aaKnown RBP eCLIP14.93□□□□□ -0.02
RAB40C-207ENST00000563109 CLCC1Q96S66 551 aa14.93□□□□□ -0.02
RAB40C-207ENST00000563109 C16orf95Q9H693 158 aa14.93□□□□□ -0.02
RAB40C-207ENST00000563109 A0A1B0GUS0 222 aa14.92□□□□□ -0.02
RAB40C-207ENST00000563109 OR2A4O95047 310 aa14.92□□□□□ -0.02
RAB40C-207ENST00000563109 VAMP1P23763 118 aa14.92□□□□□ -0.02
RAB40C-207ENST00000563109 UCP1P25874 307 aa14.92□□□□□ -0.02
RAB40C-207ENST00000563109 POU2AF1Q16633 256 aa14.92□□□□□ -0.02
RAB40C-207ENST00000563109 SLC25A42Q86VD7 318 aa14.92□□□□□ -0.02
RAB40C-207ENST00000563109 FOXRED2Q8IWF2 684 aa14.92□□□□□ -0.02
RAB40C-207ENST00000563109 GALNT14Q96FL9 552 aa14.92□□□□□ -0.02
RAB40C-207ENST00000563109 OR2A7Q96R45 310 aa14.92□□□□□ -0.02
RAB40C-207ENST00000563109 TMEM222Q9H0R3 208 aa14.92□□□□□ -0.02
RAB40C-207ENST00000563109 TPSG1Q9NRR2 321 aa14.92□□□□□ -0.02
RAB40C-207ENST00000563109 NUDT15Q9NV35 164 aa14.92□□□□□ -0.02
RAB40C-207ENST00000563109 FLVCR2Q9UPI3 526 aa14.92□□□□□ -0.02
RAB40C-207ENST00000563109 C2CD3Q4AC94 2353 aa14.92□□□□□ -0.02
RAB40C-207ENST00000563109 PIGBOS1A0A0B4J2F0 54 aa14.91□□□□□ -0.02
RAB40C-207ENST00000563109 MARCH11A6NNE9 402 aa14.91□□□□□ -0.02
RAB40C-207ENST00000563109 KBTBD11O94819 623 aa14.91□□□□□ -0.02
RAB40C-207ENST00000563109 CA2P00918 260 aa14.91□□□□□ -0.02
RAB40C-207ENST00000563109 KRASP01116 189 aa14.91□□□□□ -0.02
RAB40C-207ENST00000563109 IGHG2P01859 326 aa14.91□□□□□ -0.02
RAB40C-207ENST00000563109 CRYGBP07316 175 aa14.91□□□□□ -0.02
RAB40C-207ENST00000563109 AKR1C2P52895 323 aa14.91□□□□□ -0.02
RAB40C-207ENST00000563109 SRPXP78539 464 aa14.91□□□□□ -0.02
RAB40C-207ENST00000563109 OR4A47Q6IF82 309 aa14.91□□□□□ -0.02
RAB40C-207ENST00000563109 OR4A5Q8NH83 315 aa14.91□□□□□ -0.02
RAB40C-207ENST00000563109 RNASE11Q8TAA1 199 aaKnown RBP14.91□□□□□ -0.02
RAB40C-207ENST00000563109 ABHD5Q8WTS1 349 aa14.91□□□□□ -0.02
RAB40C-207ENST00000563109 TMEM140Q9NV12 185 aa14.91□□□□□ -0.02
RAB40C-207ENST00000563109 NUBP2Q9Y5Y2 271 aa14.91□□□□□ -0.02
RAB40C-207ENST00000563109 TRAV6A0A075B6T7 132 aa14.9□□□□□ -0.02
RAB40C-207ENST00000563109 TMEM89A2RUT3 159 aa14.9□□□□□ -0.02
RAB40C-207ENST00000563109 CLPSL1A2RUU4 121 aa14.9□□□□□ -0.02
RAB40C-207ENST00000563109 ACTL6BO94805 426 aa14.9□□□□□ -0.02
RAB40C-207ENST00000563109 G6PCP35575 357 aa14.9□□□□□ -0.02
RAB40C-207ENST00000563109 GNB1P62873 340 aa14.9□□□□□ -0.02
RAB40C-207ENST00000563109 DCTN2Q13561 401 aaKnown RBP14.9□□□□□ -0.02
RAB40C-207ENST00000563109 PRSS8Q16651 343 aa14.9□□□□□ -0.02
RAB40C-207ENST00000563109 Q6ZS46 218 aa14.9□□□□□ -0.02
RAB40C-207ENST00000563109 ZNF695Q8IW36 515 aa14.9□□□□□ -0.02
RAB40C-207ENST00000563109 MMD2Q8IY49 270 aa14.9□□□□□ -0.02
RAB40C-207ENST00000563109 PUSL1Q8N0Z8 303 aaKnown RBP14.9□□□□□ -0.02
RAB40C-207ENST00000563109 LINC01006Q8NI28 216 aa14.9□□□□□ -0.02
RAB40C-207ENST00000563109 HSPB9Q9BQS6 159 aa14.9□□□□□ -0.02
RAB40C-207ENST00000563109 BET1LQ9NYM9 111 aa14.9□□□□□ -0.02
RAB40C-207ENST00000563109 IGHV7-81A0A0B4J1V7 117 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms