RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 TCTEX1D2Q8WW35 142 aa8.47□□□□□ -1.05
SPG11-216ENST00000559347 SRSF12Q8WXF0 261 aaKnown RBP8.47□□□□□ -1.05
SPG11-216ENST00000559347 MS4A10Q96PG2 267 aa8.47□□□□□ -1.05
SPG11-216ENST00000559347 NAA50Q9GZZ1 169 aaKnown RBP8.47□□□□□ -1.05
SPG11-216ENST00000559347 TAS2R8Q9NYW2 309 aa8.47□□□□□ -1.05
SPG11-216ENST00000559347 SEC14L6B5MCN3 397 aa8.46□□□□□ -1.06
SPG11-216ENST00000559347 IGHV3-11P01762 117 aa8.46□□□□□ -1.06
SPG11-216ENST00000559347 APOA1P02647 267 aa8.46□□□□□ -1.06
SPG11-216ENST00000559347 TRGV3P03979 118 aa8.46□□□□□ -1.06
SPG11-216ENST00000559347 CD40LGP29965 261 aa8.46□□□□□ -1.06
SPG11-216ENST00000559347 BRWD1-AS2P59051 145 aa8.46□□□□□ -1.06
SPG11-216ENST00000559347 TNXAQ16473 311 aa8.46□□□□□ -1.06
SPG11-216ENST00000559347 CTF1Q16619 201 aa8.46□□□□□ -1.06
SPG11-216ENST00000559347 PRSS8Q16651 343 aa8.46□□□□□ -1.06
SPG11-216ENST00000559347 ZNF66Q6ZN08 573 aa8.46□□□□□ -1.06
SPG11-216ENST00000559347 ANKRD13BQ86YJ7 626 aa8.46□□□□□ -1.06
SPG11-216ENST00000559347 MFSD4AQ8N468 514 aa8.46□□□□□ -1.06
SPG11-216ENST00000559347 ACOT12Q8WYK0 555 aa8.46□□□□□ -1.06
SPG11-216ENST00000559347 TMEM68Q96MH6 324 aa8.46□□□□□ -1.06
SPG11-216ENST00000559347 GPHA2Q96T91 129 aa8.46□□□□□ -1.06
SPG11-216ENST00000559347 MRPS26Q9BYN8 205 aaKnown RBP8.46□□□□□ -1.06
SPG11-216ENST00000559347 ZNF430Q9H8G1 570 aaPredicted RBP8.46□□□□□ -1.06
SPG11-216ENST00000559347 CCL28Q9NRJ3 127 aa8.46□□□□□ -1.06
SPG11-216ENST00000559347 COMMD3Q9UBI1 195 aa8.46□□□□□ -1.06
SPG11-216ENST00000559347 LINC01619G3V211 115 aa8.45□□□□□ -1.06
SPG11-216ENST00000559347 TNFSF12O43508 249 aa8.45□□□□□ -1.06
SPG11-216ENST00000559347 CREBL2O60519 120 aaPredicted RBP8.45□□□□□ -1.06
SPG11-216ENST00000559347 KBTBD11O94819 623 aa8.45□□□□□ -1.06
SPG11-216ENST00000559347 BRI3O95415 125 aa8.45□□□□□ -1.06
SPG11-216ENST00000559347 APELAP0DMC3 54 aa8.45□□□□□ -1.06
SPG11-216ENST00000559347 NAT1P18440 290 aa8.45□□□□□ -1.06
SPG11-216ENST00000559347 SLURP1P55000 103 aa8.45□□□□□ -1.06
SPG11-216ENST00000559347 FXYD4P59646 89 aa8.45□□□□□ -1.06
SPG11-216ENST00000559347 DGCR2P98153 550 aa8.45□□□□□ -1.06
SPG11-216ENST00000559347 DEFA5Q01523 94 aa8.45□□□□□ -1.06
SPG11-216ENST00000559347 C10orf55Q5SWW7 151 aa8.45□□□□□ -1.06
SPG11-216ENST00000559347 ZNF818PQ6ZRF7 136 aa8.45□□□□□ -1.06
SPG11-216ENST00000559347 TMEM17Q86X19 198 aa8.45□□□□□ -1.06
SPG11-216ENST00000559347 MMD2Q8IY49 270 aa8.45□□□□□ -1.06
SPG11-216ENST00000559347 VKORC1L1Q8N0U8 176 aa8.45□□□□□ -1.06
SPG11-216ENST00000559347 OR5T1Q8NG75 326 aa8.45□□□□□ -1.06
SPG11-216ENST00000559347 GIMAP1Q8WWP7 306 aa8.45□□□□□ -1.06
SPG11-216ENST00000559347 RHOVQ96L33 236 aa8.45□□□□□ -1.06
SPG11-216ENST00000559347 CMTM3Q96MX0 182 aa8.45□□□□□ -1.06
SPG11-216ENST00000559347 PHB2Q99623 299 aa8.45□□□□□ -1.06
SPG11-216ENST00000559347 DCUN1D5Q9BTE7 237 aa8.45□□□□□ -1.06
SPG11-216ENST00000559347 SLC5A7Q9GZV3 580 aa8.45□□□□□ -1.06
SPG11-216ENST00000559347 FXYD6Q9H0Q3 95 aa8.45□□□□□ -1.06
SPG11-216ENST00000559347 EHFQ9NZC4 300 aa8.45□□□□□ -1.06
SPG11-216ENST00000559347 SCOCQ9UIL1 159 aa8.45□□□□□ -1.06
SPG11-216ENST00000559347 OVOL1O14753 267 aa8.44□□□□□ -1.06
SPG11-216ENST00000559347 RAMP3O60896 148 aa8.44□□□□□ -1.06
SPG11-216ENST00000559347 ELK1P19419 428 aa8.44□□□□□ -1.06
SPG11-216ENST00000559347 PRSS3P35030 304 aa8.44□□□□□ -1.06
SPG11-216ENST00000559347 KIR2DS2P43631 304 aa8.44□□□□□ -1.06
SPG11-216ENST00000559347 TAS2R46P59540 309 aa8.44□□□□□ -1.06
SPG11-216ENST00000559347 HERV-K104P61576 105 aa8.44□□□□□ -1.06
SPG11-216ENST00000559347 DYRK1AQ13627 763 aa8.44□□□□□ -1.06
SPG11-216ENST00000559347 PUSL1Q8N0Z8 303 aaKnown RBP8.44□□□□□ -1.06
SPG11-216ENST00000559347 ZBTB34Q8NCN2 500 aa8.44□□□□□ -1.06
SPG11-216ENST00000559347 ADAD2Q8NCV1 583 aaKnown RBP8.44□□□□□ -1.06
SPG11-216ENST00000559347 VSTM2AQ8TAG5 236 aa8.44□□□□□ -1.06
SPG11-216ENST00000559347 TMEM167AQ8TBQ9 72 aa8.44□□□□□ -1.06
SPG11-216ENST00000559347 GPX8Q8TED1 209 aa8.44□□□□□ -1.06
SPG11-216ENST00000559347 DCUN1D4Q92564 292 aa8.44□□□□□ -1.06
SPG11-216ENST00000559347 DLX4Q92988 240 aaPredicted RBP8.44□□□□□ -1.06
SPG11-216ENST00000559347 TINAGL1Q9GZM7 467 aaPredicted RBP8.44□□□□□ -1.06
SPG11-216ENST00000559347 ZNF355PQ9NSJ1 428 aa8.44□□□□□ -1.06
SPG11-216ENST00000559347 COA4Q9NYJ1 87 aa8.44□□□□□ -1.06
SPG11-216ENST00000559347 ZMAT5Q9UDW3 170 aaKnown RBP8.44□□□□□ -1.06
SPG11-216ENST00000559347 A0A0G2JLM5 398 aa8.43□□□□□ -1.06
SPG11-216ENST00000559347 C13orf42A0A1B0GVH6 325 aa8.43□□□□□ -1.06
SPG11-216ENST00000559347 MSGN1A6NI15 193 aa8.43□□□□□ -1.06
SPG11-216ENST00000559347 RBFOX2O43251 390 aaKnown RBP eCLIP8.43□□□□□ -1.06
SPG11-216ENST00000559347 HPGDSO60760 199 aa8.43□□□□□ -1.06
SPG11-216ENST00000559347 RBMXL2O75526 392 aaKnown RBP8.43□□□□□ -1.06
SPG11-216ENST00000559347 PMP2P02689 132 aa8.43□□□□□ -1.06
SPG11-216ENST00000559347 HSPB1P04792 205 aaKnown RBP8.43□□□□□ -1.06
SPG11-216ENST00000559347 OR9G9P0C7N8 305 aa8.43□□□□□ -1.06
SPG11-216ENST00000559347 RFX2P48378 723 aa8.43□□□□□ -1.06
SPG11-216ENST00000559347 ALDH3B2P48448 385 aa8.43□□□□□ -1.06
SPG11-216ENST00000559347 RORCP51449 518 aa8.43□□□□□ -1.06
SPG11-216ENST00000559347 INSL3P51460 131 aa8.43□□□□□ -1.06
SPG11-216ENST00000559347 CATR1Q13166 79 aa8.43□□□□□ -1.06
SPG11-216ENST00000559347 GPR107Q5VW38 600 aa8.43□□□□□ -1.06
SPG11-216ENST00000559347 SPAG16Q8N0X2 631 aa8.43□□□□□ -1.06
SPG11-216ENST00000559347 OR5H2Q8NGV7 314 aa8.43□□□□□ -1.06
SPG11-216ENST00000559347 MOB3AQ96BX8 217 aa8.43□□□□□ -1.06
SPG11-216ENST00000559347 ZNF2Q9BSG1 426 aaPredicted RBP8.43□□□□□ -1.06
SPG11-216ENST00000559347 SCPEP1Q9HB40 452 aa8.43□□□□□ -1.06
SPG11-216ENST00000559347 ADAM30Q9UKF2 790 aa8.43□□□□□ -1.06
SPG11-216ENST00000559347 SMIM31A0A1B0GVY4 71 aa8.42□□□□□ -1.06
SPG11-216ENST00000559347 TEX22C9J3V5 150 aa8.42□□□□□ -1.06
SPG11-216ENST00000559347 SULT1C2O00338 296 aa8.42□□□□□ -1.06
SPG11-216ENST00000559347 MPPED1O15442 326 aa8.42□□□□□ -1.06
SPG11-216ENST00000559347 SAP30O75446 220 aa8.42□□□□□ -1.06
SPG11-216ENST00000559347 ACTL6BO94805 426 aa8.42□□□□□ -1.06
SPG11-216ENST00000559347 OR2A4O95047 310 aa8.42□□□□□ -1.06
SPG11-216ENST00000559347 HRASP01112 189 aa8.42□□□□□ -1.06
SPG11-216ENST00000559347 HRH1P35367 487 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms