RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 MYOZ3Q8TDC0 251 aa5.65□□□□□ -1.5
SPG11-213ENST00000558988 RAB3CQ96E17 227 aa5.65□□□□□ -1.5
SPG11-213ENST00000558988 TSNAXQ99598 290 aaKnown RBP5.65□□□□□ -1.5
SPG11-213ENST00000558988 MGLLQ99685 303 aa5.65□□□□□ -1.5
SPG11-213ENST00000558988 GINS4Q9BRT9 223 aa5.65□□□□□ -1.5
SPG11-213ENST00000558988 OR2D2Q9H210 308 aa5.65□□□□□ -1.5
SPG11-213ENST00000558988 ZNF230Q9UIE0 474 aaPredicted RBP5.65□□□□□ -1.5
SPG11-213ENST00000558988 LSM4Q9Y4Z0 139 aaKnown RBP5.65□□□□□ -1.5
SPG11-213ENST00000558988 V9GY05 133 aa5.65□□□□□ -1.5
SPG11-213ENST00000558988 TRBV6-6A0A0A6YYG2 114 aa5.64□□□□□ -1.51
SPG11-213ENST00000558988 PDCD5O14737 125 aa5.64□□□□□ -1.51
SPG11-213ENST00000558988 FABP7O15540 132 aa5.64□□□□□ -1.51
SPG11-213ENST00000558988 RBBP9O75884 186 aa5.64□□□□□ -1.51
SPG11-213ENST00000558988 FCGR3AP08637 254 aa5.64□□□□□ -1.51
SPG11-213ENST00000558988 GSTT2P0CG29 244 aa5.64□□□□□ -1.51
SPG11-213ENST00000558988 GSTT2BP0CG30 244 aa5.64□□□□□ -1.51
SPG11-213ENST00000558988 CRHBPP24387 322 aa5.64□□□□□ -1.51
SPG11-213ENST00000558988 GADD45AP24522 165 aa5.64□□□□□ -1.51
SPG11-213ENST00000558988 PSMA1P25786 263 aaKnown RBP5.64□□□□□ -1.51
SPG11-213ENST00000558988 TALDO1P37837 337 aa5.64□□□□□ -1.51
SPG11-213ENST00000558988 TMEM50BP56557 158 aa5.64□□□□□ -1.51
SPG11-213ENST00000558988 PJVKQ0ZLH3 352 aa5.64□□□□□ -1.51
SPG11-213ENST00000558988 CBX3Q13185 183 aa5.64□□□□□ -1.51
SPG11-213ENST00000558988 TPBGQ13641 420 aa5.64□□□□□ -1.51
SPG11-213ENST00000558988 TRAM1Q15629 374 aa5.64□□□□□ -1.51
SPG11-213ENST00000558988 LY6G6FQ5SQ64 297 aa5.64□□□□□ -1.51
SPG11-213ENST00000558988 ZBTB8BQ8NAP8 495 aaPredicted RBP5.64□□□□□ -1.51
SPG11-213ENST00000558988 OR10J5Q8NHC4 309 aa5.64□□□□□ -1.51
SPG11-213ENST00000558988 FLYWCH2Q96CP2 140 aaKnown RBP5.64□□□□□ -1.51
SPG11-213ENST00000558988 HARBI1Q96MB7 349 aa5.64□□□□□ -1.51
SPG11-213ENST00000558988 OR4C12Q96R67 309 aa5.64□□□□□ -1.51
SPG11-213ENST00000558988 PHB2Q99623 299 aa5.64□□□□□ -1.51
SPG11-213ENST00000558988 CHCHD6Q9BRQ6 235 aa5.64□□□□□ -1.51
SPG11-213ENST00000558988 AGMATQ9BSE5 352 aa5.64□□□□□ -1.51
SPG11-213ENST00000558988 TOLLIPQ9H0E2 274 aa5.64□□□□□ -1.51
SPG11-213ENST00000558988 ATG5Q9H1Y0 275 aa5.64□□□□□ -1.51
SPG11-213ENST00000558988 GHITMQ9H3K2 345 aa5.64□□□□□ -1.51
SPG11-213ENST00000558988 DUSP21Q9H596 190 aa5.64□□□□□ -1.51
SPG11-213ENST00000558988 ACOT13Q9NPJ3 140 aa5.64□□□□□ -1.51
SPG11-213ENST00000558988 COA4Q9NYJ1 87 aa5.64□□□□□ -1.51
SPG11-213ENST00000558988 RAB22AQ9UL26 194 aa5.64□□□□□ -1.51
SPG11-213ENST00000558988 HSF4Q9ULV5 492 aa5.64□□□□□ -1.51
SPG11-213ENST00000558988 MGAT4AQ9UM21 535 aa5.64□□□□□ -1.51
SPG11-213ENST00000558988 SMAD5-AS1Q9Y6J3 95 aa5.64□□□□□ -1.51
SPG11-213ENST00000558988 C13orf42A0A1B0GVH6 325 aa5.63□□□□□ -1.51
SPG11-213ENST00000558988 FOXI3A8MTJ6 420 aaPredicted RBP5.63□□□□□ -1.51
SPG11-213ENST00000558988 ARPC1BO15143 372 aaKnown RBP5.63□□□□□ -1.51
SPG11-213ENST00000558988 MPPED1O15442 326 aa5.63□□□□□ -1.51
SPG11-213ENST00000558988 NHLRC4P0CG21 123 aaPredicted RBP5.63□□□□□ -1.51
SPG11-213ENST00000558988 GP9P14770 177 aa5.63□□□□□ -1.51
SPG11-213ENST00000558988 RUNX1Q01196 453 aa5.63□□□□□ -1.51
SPG11-213ENST00000558988 SSX1Q16384 188 aa5.63□□□□□ -1.51
SPG11-213ENST00000558988 TNXAQ16473 311 aa5.63□□□□□ -1.51
SPG11-213ENST00000558988 OR2B11Q5JQS5 317 aa5.63□□□□□ -1.51
SPG11-213ENST00000558988 FAM209BQ5JX69 171 aa5.63□□□□□ -1.51
SPG11-213ENST00000558988 C22orf42Q6IC83 251 aa5.63□□□□□ -1.51
SPG11-213ENST00000558988 ZNF562Q6V9R5 426 aa5.63□□□□□ -1.51
SPG11-213ENST00000558988 IDO2Q6ZQW0 420 aa5.63□□□□□ -1.51
SPG11-213ENST00000558988 ZNF367Q7RTV3 350 aa5.63□□□□□ -1.51
SPG11-213ENST00000558988 PRSS48Q7RTY5 328 aa5.63□□□□□ -1.51
SPG11-213ENST00000558988 ZNF429Q86V71 674 aa5.63□□□□□ -1.51
SPG11-213ENST00000558988 PDPNQ86YL7 162 aa5.63□□□□□ -1.51
SPG11-213ENST00000558988 FAM89BQ8N5H3 189 aa5.63□□□□□ -1.51
SPG11-213ENST00000558988 TCTEX1D1Q8N7M0 179 aa5.63□□□□□ -1.51
SPG11-213ENST00000558988 OR4A4PQ8NGN8 299 aa5.63□□□□□ -1.51
SPG11-213ENST00000558988 OR10R2Q8NGX6 335 aa5.63□□□□□ -1.51
SPG11-213ENST00000558988 DCUN1D5Q9BTE7 237 aa5.63□□□□□ -1.51
SPG11-213ENST00000558988 VCX3BQ9H321 246 aa5.63□□□□□ -1.51
SPG11-213ENST00000558988 NUBP2Q9Y5Y2 271 aa5.63□□□□□ -1.51
SPG11-213ENST00000558988 SORL1Q92673 2214 aa5.63□□□□□ -1.51
SPG11-213ENST00000558988 TRIM64CA6NLI5 447 aa5.62□□□□□ -1.51
SPG11-213ENST00000558988 B5MCH6 92 aa5.62□□□□□ -1.51
SPG11-213ENST00000558988 ITGB1BP1O14713 200 aa5.62□□□□□ -1.51
SPG11-213ENST00000558988 CRYZL1O95825 349 aa5.62□□□□□ -1.51
SPG11-213ENST00000558988 HSPB1P04792 205 aaKnown RBP5.62□□□□□ -1.51
SPG11-213ENST00000558988 FRMD6-AS1P0C7T7 363 aa5.62□□□□□ -1.51
SPG11-213ENST00000558988 RAB3BP20337 219 aa5.62□□□□□ -1.51
SPG11-213ENST00000558988 PSMB9P28065 219 aa5.62□□□□□ -1.51
SPG11-213ENST00000558988 SERPINB10P48595 397 aa5.62□□□□□ -1.51
SPG11-213ENST00000558988 INSL3P51460 131 aa5.62□□□□□ -1.51
SPG11-213ENST00000558988 PSMD7P51665 324 aa5.62□□□□□ -1.51
SPG11-213ENST00000558988 TBCEQ15813 527 aaPredicted RBP5.62□□□□□ -1.51
SPG11-213ENST00000558988 RTL8BQ17RB0 113 aa5.62□□□□□ -1.51
SPG11-213ENST00000558988 AKIRIN2Q53H80 203 aa5.62□□□□□ -1.51
SPG11-213ENST00000558988 PYHIN1Q6K0P9 492 aa5.62□□□□□ -1.51
SPG11-213ENST00000558988 ACSM6Q6P461 480 aa5.62□□□□□ -1.51
SPG11-213ENST00000558988 CD200R1LQ6Q8B3 271 aa5.62□□□□□ -1.51
SPG11-213ENST00000558988 ANKRD13BQ86YJ7 626 aa5.62□□□□□ -1.51
SPG11-213ENST00000558988 SBSPONQ8IVN8 264 aa5.62□□□□□ -1.51
SPG11-213ENST00000558988 POC5Q8NA72 575 aa5.62□□□□□ -1.51
SPG11-213ENST00000558988 OR6Q1Q8NGQ2 317 aa5.62□□□□□ -1.51
SPG11-213ENST00000558988 ACOT12Q8WYK0 555 aa5.62□□□□□ -1.51
SPG11-213ENST00000558988 PTX4Q96A99 478 aa5.62□□□□□ -1.51
SPG11-213ENST00000558988 C5orf30Q96GV9 206 aa5.62□□□□□ -1.51
SPG11-213ENST00000558988 RCHY1Q96PM5 261 aa5.62□□□□□ -1.51
SPG11-213ENST00000558988 ST6GALNAC5Q9BVH7 336 aa5.62□□□□□ -1.51
SPG11-213ENST00000558988 ELOVL1Q9BW60 279 aa5.62□□□□□ -1.51
SPG11-213ENST00000558988 SDHAF2Q9NX18 166 aa5.62□□□□□ -1.51
SPG11-213ENST00000558988 ELF5Q9UKW6 265 aaPredicted RBP5.62□□□□□ -1.51
SPG11-213ENST00000558988 BLOC1S6Q9UL45 172 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms