RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 IGKV1D-33P01593 117 aa13.56□□□□□ -0.24
SNX1-203ENST00000558040 IGKV1-33P01594 117 aa13.56□□□□□ -0.24
SNX1-203ENST00000558040 SNRNP70P08621 437 aaKnown RBP13.56□□□□□ -0.24
SNX1-203ENST00000558040 DYNLT3P51808 116 aa13.56□□□□□ -0.24
SNX1-203ENST00000558040 H2BFSP57053 126 aa13.56□□□□□ -0.24
SNX1-203ENST00000558040 HES1Q14469 280 aa13.56□□□□□ -0.24
SNX1-203ENST00000558040 IAH1Q2TAA2 248 aaPredicted RBP13.56□□□□□ -0.24
SNX1-203ENST00000558040 VMA21Q3ZAQ7 101 aa13.56□□□□□ -0.24
SNX1-203ENST00000558040 C9orf139Q6ZV77 190 aa13.56□□□□□ -0.24
SNX1-203ENST00000558040 THNSL2Q86YJ6 484 aa13.56□□□□□ -0.24
SNX1-203ENST00000558040 VSTM2AQ8TAG5 236 aa13.56□□□□□ -0.24
SNX1-203ENST00000558040 CHIAQ9BZP6 476 aa13.56□□□□□ -0.24
SNX1-203ENST00000558040 RANBP3Q9H6Z4 567 aaPredicted RBP13.56□□□□□ -0.24
SNX1-203ENST00000558040 ABCA1O95477 2261 aa13.55□□□□□ -0.24
SNX1-203ENST00000558040 MPTX1A8MV57 137 aa13.55□□□□□ -0.24
SNX1-203ENST00000558040 OR2A4O95047 310 aa13.55□□□□□ -0.24
SNX1-203ENST00000558040 P0C879 139 aa13.55□□□□□ -0.24
SNX1-203ENST00000558040 CD99P14209 185 aa13.55□□□□□ -0.24
SNX1-203ENST00000558040 PAX6P26367 422 aa13.55□□□□□ -0.24
SNX1-203ENST00000558040 RAP2BP61225 183 aa13.55□□□□□ -0.24
SNX1-203ENST00000558040 SRSF4Q08170 494 aaKnown RBP13.55□□□□□ -0.24
SNX1-203ENST00000558040 SMCO1Q147U7 214 aa13.55□□□□□ -0.24
SNX1-203ENST00000558040 FAM120AOSQ5T036 256 aa13.55□□□□□ -0.24
SNX1-203ENST00000558040 SSX9Q7RTT3 188 aa13.55□□□□□ -0.24
SNX1-203ENST00000558040 GPR146Q96CH1 333 aa13.55□□□□□ -0.24
SNX1-203ENST00000558040 OR10C1Q96KK4 312 aa13.55□□□□□ -0.24
SNX1-203ENST00000558040 OR2A7Q96R45 310 aa13.55□□□□□ -0.24
SNX1-203ENST00000558040 NMES1Q9C002 83 aa13.55□□□□□ -0.24
SNX1-203ENST00000558040 TMEM140Q9NV12 185 aa13.55□□□□□ -0.24
SNX1-203ENST00000558040 TMEM160Q9NX00 188 aa13.55□□□□□ -0.24
SNX1-203ENST00000558040 BAHCC1Q9P281 2608 aa13.55□□□□□ -0.24
SNX1-203ENST00000558040 ITPR3Q14573 2671 aa13.55□□□□□ -0.24
SNX1-203ENST00000558040 A0A0G2JRQ6 117 aa13.54□□□□□ -0.24
SNX1-203ENST00000558040 SPDEFO95238 335 aa13.54□□□□□ -0.24
SNX1-203ENST00000558040 SAA1P0DJI8 122 aaPredicted RBP13.54□□□□□ -0.24
SNX1-203ENST00000558040 SRP14P37108 136 aaKnown RBP13.54□□□□□ -0.24
SNX1-203ENST00000558040 UBE2KP61086 200 aa13.54□□□□□ -0.24
SNX1-203ENST00000558040 EBI3Q14213 229 aa13.54□□□□□ -0.24
SNX1-203ENST00000558040 AANATQ16613 207 aa13.54□□□□□ -0.24
SNX1-203ENST00000558040 LRRC75BQ2VPJ9 315 aa13.54□□□□□ -0.24
SNX1-203ENST00000558040 OR4A47Q6IF82 309 aa13.54□□□□□ -0.24
SNX1-203ENST00000558040 VKORC1L1Q8N0U8 176 aa13.54□□□□□ -0.24
SNX1-203ENST00000558040 ZBTB8BQ8NAP8 495 aaPredicted RBP13.54□□□□□ -0.24
SNX1-203ENST00000558040 OR4A5Q8NH83 315 aa13.54□□□□□ -0.24
SNX1-203ENST00000558040 OR1S1Q8NH92 325 aa13.54□□□□□ -0.24
SNX1-203ENST00000558040 EAF1Q96JC9 268 aaPredicted RBP13.54□□□□□ -0.24
SNX1-203ENST00000558040 TMUB1Q9BVT8 246 aa13.54□□□□□ -0.24
SNX1-203ENST00000558040 RANGRFQ9HD47 186 aaPredicted RBP13.54□□□□□ -0.24
SNX1-203ENST00000558040 COA4Q9NYJ1 87 aa13.54□□□□□ -0.24
SNX1-203ENST00000558040 BET1LQ9NYM9 111 aa13.54□□□□□ -0.24
SNX1-203ENST00000558040 GSKIPQ9P0R6 139 aa13.54□□□□□ -0.24
SNX1-203ENST00000558040 CACNG5Q9UF02 275 aa13.54□□□□□ -0.24
SNX1-203ENST00000558040 SRRM4A7MD48 611 aaKnown RBP13.53□□□□□ -0.24
SNX1-203ENST00000558040 RBMXL2O75526 392 aaKnown RBP13.53□□□□□ -0.24
SNX1-203ENST00000558040 SNAPC5O75971 98 aa13.53□□□□□ -0.24
SNX1-203ENST00000558040 TMEM11P17152 192 aa13.53□□□□□ -0.24
SNX1-203ENST00000558040 OR4A16Q8NH70 328 aa13.53□□□□□ -0.24
SNX1-203ENST00000558040 ST6GAL2Q96JF0 529 aa13.53□□□□□ -0.24
SNX1-203ENST00000558040 NEURL2Q9BR09 285 aa13.53□□□□□ -0.24
SNX1-203ENST00000558040 ASH1LQ9NR48 2969 aaKnown RBP13.53□□□□□ -0.24
SNX1-203ENST00000558040 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.53□□□□□ -0.24
SNX1-203ENST00000558040 ZFP57Q9NU63 452 aa13.53□□□□□ -0.24
SNX1-203ENST00000558040 KIAA1456Q9P272 454 aa13.53□□□□□ -0.24
SNX1-203ENST00000558040 CACFD1Q9UGQ2 172 aa13.53□□□□□ -0.24
SNX1-203ENST00000558040 IGLV2-23P01705 113 aa13.52□□□□□ -0.25
SNX1-203ENST00000558040 CD24P25063 80 aa13.52□□□□□ -0.25
SNX1-203ENST00000558040 FGL1Q08830 312 aa13.52□□□□□ -0.25
SNX1-203ENST00000558040 SCGB2A2Q13296 93 aa13.52□□□□□ -0.25
SNX1-203ENST00000558040 HNF4GQ14541 408 aa13.52□□□□□ -0.25
SNX1-203ENST00000558040 MMDQ15546 238 aa13.52□□□□□ -0.25
SNX1-203ENST00000558040 TCTE3Q8IZS6 198 aa13.52□□□□□ -0.25
SNX1-203ENST00000558040 PUSL1Q8N0Z8 303 aaKnown RBP13.52□□□□□ -0.25
SNX1-203ENST00000558040 TEX45Q8NA69 505 aa13.52□□□□□ -0.25
SNX1-203ENST00000558040 OR8H1Q8NGG4 311 aa13.52□□□□□ -0.25
SNX1-203ENST00000558040 SSX3Q99909 188 aa13.52□□□□□ -0.25
SNX1-203ENST00000558040 C1RLQ9NZP8 487 aa13.52□□□□□ -0.25
SNX1-203ENST00000558040 VPS13CQ709C8 3753 aa13.51□□□□□ -0.25
SNX1-203ENST00000558040 NBR2O15453 112 aa13.51□□□□□ -0.25
SNX1-203ENST00000558040 SLC25A17O43808 307 aa13.51□□□□□ -0.25
SNX1-203ENST00000558040 KBTBD11O94819 623 aa13.51□□□□□ -0.25
SNX1-203ENST00000558040 LY6G6DO95868 133 aa13.51□□□□□ -0.25
SNX1-203ENST00000558040 OR9G9P0C7N8 305 aa13.51□□□□□ -0.25
SNX1-203ENST00000558040 PSG5Q15238 335 aa13.51□□□□□ -0.25
SNX1-203ENST00000558040 IZUMO4Q1ZYL8 232 aa13.51□□□□□ -0.25
SNX1-203ENST00000558040 DEFB112Q30KQ8 113 aa13.51□□□□□ -0.25
SNX1-203ENST00000558040 Q6ZRM9 215 aa13.51□□□□□ -0.25
SNX1-203ENST00000558040 FOXRED2Q8IWF2 684 aa13.51□□□□□ -0.25
SNX1-203ENST00000558040 BCL6BQ8N143 479 aaPredicted RBP13.51□□□□□ -0.25
SNX1-203ENST00000558040 Q8N6K4 173 aa13.51□□□□□ -0.25
SNX1-203ENST00000558040 NPBQ8NG41 125 aa13.51□□□□□ -0.25
SNX1-203ENST00000558040 OR4D5Q8NGN0 318 aa13.51□□□□□ -0.25
SNX1-203ENST00000558040 OR2T35Q8NGX2 323 aa13.51□□□□□ -0.25
SNX1-203ENST00000558040 ZDHHC16Q969W1 377 aa13.51□□□□□ -0.25
SNX1-203ENST00000558040 RBMXL1Q96E39 390 aaKnown RBP13.51□□□□□ -0.25
SNX1-203ENST00000558040 RITA1Q96K30 269 aa13.51□□□□□ -0.25
SNX1-203ENST00000558040 FYTTD1Q96QD9 318 aaKnown RBP13.51□□□□□ -0.25
SNX1-203ENST00000558040 PRNDQ9UKY0 176 aa13.51□□□□□ -0.25
SNX1-203ENST00000558040 NOTCH2Q04721 2471 aa13.51□□□□□ -0.25
SNX1-203ENST00000558040 MYO9AB2RTY4 2548 aa13.5□□□□□ -0.25
SNX1-203ENST00000558040 FAM90A26D6RGX4 464 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms