RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 CDK10Q15131 360 aa17.23■□□□□ 0.35
ACTN1-220ENST00000556433 CASC10Q5T4H9 136 aa17.23■□□□□ 0.35
ACTN1-220ENST00000556433 SPARTQ8N0X7 666 aa17.23■□□□□ 0.35
ACTN1-220ENST00000556433 NUDCD2Q8WVJ2 157 aa17.23■□□□□ 0.35
ACTN1-220ENST00000556433 DAPK2Q9UIK4 370 aa17.23■□□□□ 0.35
ACTN1-220ENST00000556433 RBMX2Q9Y388 322 aaKnown RBP17.23■□□□□ 0.35
ACTN1-220ENST00000556433 PRELID3BQ9Y3B1 194 aa17.23■□□□□ 0.35
ACTN1-220ENST00000556433 A8MZ25 164 aa17.22■□□□□ 0.35
ACTN1-220ENST00000556433 CREBL2O60519 120 aaPredicted RBP17.22■□□□□ 0.35
ACTN1-220ENST00000556433 SLC22A5O76082 557 aa17.22■□□□□ 0.35
ACTN1-220ENST00000556433 PRH1P02810 166 aa17.22■□□□□ 0.35
ACTN1-220ENST00000556433 RPL30P62888 115 aaKnown RBP17.22■□□□□ 0.35
ACTN1-220ENST00000556433 RHOGP84095 191 aa17.22■□□□□ 0.35
ACTN1-220ENST00000556433 ATP5G2Q06055 141 aa17.22■□□□□ 0.35
ACTN1-220ENST00000556433 OR2B11Q5JQS5 317 aa17.22■□□□□ 0.35
ACTN1-220ENST00000556433 CNIH2Q6PI25 160 aa17.22■□□□□ 0.35
ACTN1-220ENST00000556433 KCTD9Q7L273 389 aa17.22■□□□□ 0.35
ACTN1-220ENST00000556433 TPRA1Q86W33 373 aa17.22■□□□□ 0.35
ACTN1-220ENST00000556433 MMD2Q8IY49 270 aa17.22■□□□□ 0.35
ACTN1-220ENST00000556433 TM2D3Q9BRN9 247 aa17.22■□□□□ 0.35
ACTN1-220ENST00000556433 AKIP1Q9NQ31 210 aa17.22■□□□□ 0.35
ACTN1-220ENST00000556433 SSR3Q9UNL2 185 aa17.22■□□□□ 0.35
ACTN1-220ENST00000556433 RRP15Q9Y3B9 282 aaKnown RBP17.22■□□□□ 0.35
ACTN1-220ENST00000556433 TMEM235A6NFC5 223 aa17.21■□□□□ 0.35
ACTN1-220ENST00000556433 CD36P16671 472 aa17.21■□□□□ 0.35
ACTN1-220ENST00000556433 GNG2P59768 71 aa17.21■□□□□ 0.35
ACTN1-220ENST00000556433 SPIN2AQ99865 258 aa17.21■□□□□ 0.35
ACTN1-220ENST00000556433 SPIN2BQ9BPZ2 258 aa17.21■□□□□ 0.35
ACTN1-220ENST00000556433 MRPS7Q9Y2R9 242 aaKnown RBP17.21■□□□□ 0.35
ACTN1-220ENST00000556433 IGKV1D-13A0A0B4J2D9 117 aa17.2■□□□□ 0.34
ACTN1-220ENST00000556433 FAM223BA6NKX1 122 aa17.2■□□□□ 0.34
ACTN1-220ENST00000556433 SCGNO76038 276 aa17.2■□□□□ 0.34
ACTN1-220ENST00000556433 IGLV2-14P01704 120 aa17.2■□□□□ 0.34
ACTN1-220ENST00000556433 IGKV1-13P0DP09 117 aa17.2■□□□□ 0.34
ACTN1-220ENST00000556433 ZNF45Q02386 682 aa17.2■□□□□ 0.34
ACTN1-220ENST00000556433 C10orf55Q5SWW7 151 aa17.2■□□□□ 0.34
ACTN1-220ENST00000556433 FAM223AQ8IWN6 122 aa17.2■□□□□ 0.34
ACTN1-220ENST00000556433 TTC9CQ8N5M4 171 aa17.2■□□□□ 0.34
ACTN1-220ENST00000556433 FCGR1BQ92637 280 aa17.2■□□□□ 0.34
ACTN1-220ENST00000556433 CITED4Q96RK1 184 aa17.2■□□□□ 0.34
ACTN1-220ENST00000556433 SIGLEC8Q9NYZ4 499 aa17.2■□□□□ 0.34
ACTN1-220ENST00000556433 TRBV9A0A0B4J1U6 114 aa17.19■□□□□ 0.34
ACTN1-220ENST00000556433 SSX5O60225 188 aa17.19■□□□□ 0.34
ACTN1-220ENST00000556433 OR2A4O95047 310 aa17.19■□□□□ 0.34
ACTN1-220ENST00000556433 LYL1P12980 280 aa17.19■□□□□ 0.34
ACTN1-220ENST00000556433 EXOSC2Q13868 293 aaKnown RBP17.19■□□□□ 0.34
ACTN1-220ENST00000556433 VKORC1L1Q8N0U8 176 aa17.19■□□□□ 0.34
ACTN1-220ENST00000556433 LGALS14Q8TCE9 139 aa17.19■□□□□ 0.34
ACTN1-220ENST00000556433 OR51E2Q9H255 320 aa17.19■□□□□ 0.34
ACTN1-220ENST00000556433 PEMTQ9UBM1 199 aa17.19■□□□□ 0.34
ACTN1-220ENST00000556433 ANXA10Q9UJ72 324 aa17.19■□□□□ 0.34
ACTN1-220ENST00000556433 DNAH7Q8WXX0 4024 aa17.18■□□□□ 0.34
ACTN1-220ENST00000556433 LCN12Q6JVE5 192 aa17.18■□□□□ 0.34
ACTN1-220ENST00000556433 SFXN4Q6P4A7 337 aa17.18■□□□□ 0.34
ACTN1-220ENST00000556433 SLC25A42Q86VD7 318 aa17.18■□□□□ 0.34
ACTN1-220ENST00000556433 Q8N402 240 aa17.18■□□□□ 0.34
ACTN1-220ENST00000556433 TCTEX1D2Q8WW35 142 aa17.18■□□□□ 0.34
ACTN1-220ENST00000556433 HSD17B10Q99714 261 aaKnown RBP17.18■□□□□ 0.34
ACTN1-220ENST00000556433 PALMDQ9NP74 551 aa17.18■□□□□ 0.34
ACTN1-220ENST00000556433 SPATA2Q9UM82 520 aa17.18■□□□□ 0.34
ACTN1-220ENST00000556433 IZUMO1RA6ND01 250 aa17.17■□□□□ 0.34
ACTN1-220ENST00000556433 BMPR1BO00238 502 aa17.17■□□□□ 0.34
ACTN1-220ENST00000556433 SDC2P34741 201 aa17.17■□□□□ 0.34
ACTN1-220ENST00000556433 GTSCR1Q86UQ5 136 aa17.17■□□□□ 0.34
ACTN1-220ENST00000556433 NECAP1Q8NC96 275 aa17.17■□□□□ 0.34
ACTN1-220ENST00000556433 OR4S2Q8NH73 311 aa17.17■□□□□ 0.34
ACTN1-220ENST00000556433 OR2A7Q96R45 310 aa17.17■□□□□ 0.34
ACTN1-220ENST00000556433 YTHDF1Q9BYJ9 559 aaKnown RBP17.17■□□□□ 0.34
ACTN1-220ENST00000556433 Q9H521 79 aa17.17■□□□□ 0.34
ACTN1-220ENST00000556433 TUBA4BQ9H853 241 aa17.17■□□□□ 0.34
ACTN1-220ENST00000556433 RHBDL2Q9NX52 303 aa17.17■□□□□ 0.34
ACTN1-220ENST00000556433 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.16■□□□□ 0.34
ACTN1-220ENST00000556433 HMX3A6NHT5 357 aa17.16■□□□□ 0.34
ACTN1-220ENST00000556433 AIREO43918 545 aa17.16■□□□□ 0.34
ACTN1-220ENST00000556433 OR2J3O76001 311 aa17.16■□□□□ 0.34
ACTN1-220ENST00000556433 ATP6V1G2O95670 118 aa17.16■□□□□ 0.34
ACTN1-220ENST00000556433 MECP2P51608 486 aaKnown RBP17.16■□□□□ 0.34
ACTN1-220ENST00000556433 MXD1Q05195 221 aa17.16■□□□□ 0.34
ACTN1-220ENST00000556433 MFSD4AQ8N468 514 aa17.16■□□□□ 0.34
ACTN1-220ENST00000556433 VSTM2AQ8TAG5 236 aa17.16■□□□□ 0.34
ACTN1-220ENST00000556433 THAP7Q9BT49 309 aaPredicted RBP17.16■□□□□ 0.34
ACTN1-220ENST00000556433 TAS2R8Q9NYW2 309 aa17.16■□□□□ 0.34
ACTN1-220ENST00000556433 CLEC2LP0C7M8 214 aa17.15■□□□□ 0.34
ACTN1-220ENST00000556433 EIF4EBP1Q13541 118 aaPredicted RBP17.15■□□□□ 0.34
ACTN1-220ENST00000556433 HAGHQ16775 308 aa17.15■□□□□ 0.34
ACTN1-220ENST00000556433 C15orf32Q32M92 178 aa17.15■□□□□ 0.34
ACTN1-220ENST00000556433 TMEM167AQ8TBQ9 72 aa17.15■□□□□ 0.34
ACTN1-220ENST00000556433 FYTTD1Q96QD9 318 aaKnown RBP17.15■□□□□ 0.34
ACTN1-220ENST00000556433 TRAV18A0A075B6X5 111 aa17.14■□□□□ 0.33
ACTN1-220ENST00000556433 DPPA5A6NC42 116 aa17.14■□□□□ 0.33
ACTN1-220ENST00000556433 TEX22C9J3V5 150 aa17.14■□□□□ 0.33
ACTN1-220ENST00000556433 KBTBD11O94819 623 aa17.14■□□□□ 0.33
ACTN1-220ENST00000556433 IL6RP08887 468 aaPredicted RBP17.14■□□□□ 0.33
ACTN1-220ENST00000556433 RPL27AP46776 148 aaKnown RBP17.14■□□□□ 0.33
ACTN1-220ENST00000556433 BRWD1-AS2P59051 145 aa17.14■□□□□ 0.33
ACTN1-220ENST00000556433 ARPC4P59998 168 aa17.14■□□□□ 0.33
ACTN1-220ENST00000556433 ZNF66Q6ZN08 573 aa17.14■□□□□ 0.33
ACTN1-220ENST00000556433 PUSL1Q8N0Z8 303 aaKnown RBP17.14■□□□□ 0.33
ACTN1-220ENST00000556433 OR2K2Q8NGT1 345 aa17.14■□□□□ 0.33
ACTN1-220ENST00000556433 OR5H6Q8NGV6 325 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms