RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 CENPVL3A0A0U1RRI6 287 aa7.8□□□□□ -1.16
HNRNPC-220ENST00000555585 G3V3Q6 166 aa7.8□□□□□ -1.16
HNRNPC-220ENST00000555585 WRBO00258 174 aa7.8□□□□□ -1.16
HNRNPC-220ENST00000555585 SMAD7O15105 426 aaKnown RBP7.8□□□□□ -1.16
HNRNPC-220ENST00000555585 NPFFO15130 113 aa7.8□□□□□ -1.16
HNRNPC-220ENST00000555585 RBMXL2O75526 392 aaKnown RBP7.8□□□□□ -1.16
HNRNPC-220ENST00000555585 MBPP02686 304 aaPredicted RBP7.8□□□□□ -1.16
HNRNPC-220ENST00000555585 IGKV1-16P04430 117 aa7.8□□□□□ -1.16
HNRNPC-220ENST00000555585 PET100P0DJ07 73 aa7.8□□□□□ -1.16
HNRNPC-220ENST00000555585 SLC25A6P12236 298 aa7.8□□□□□ -1.16
HNRNPC-220ENST00000555585 NKX2-1P43699 371 aaPredicted RBP7.8□□□□□ -1.16
HNRNPC-220ENST00000555585 IL15RAQ13261 267 aa7.8□□□□□ -1.16
HNRNPC-220ENST00000555585 SSX2Q16385 188 aa7.8□□□□□ -1.16
HNRNPC-220ENST00000555585 TMEM177Q53S58 311 aa7.8□□□□□ -1.16
HNRNPC-220ENST00000555585 LDLRAD2Q5SZI1 272 aa7.8□□□□□ -1.16
HNRNPC-220ENST00000555585 GPR157Q5UAW9 335 aa7.8□□□□□ -1.16
HNRNPC-220ENST00000555585 CYB5R2Q6BCY4 276 aa7.8□□□□□ -1.16
HNRNPC-220ENST00000555585 CCDC144NLQ6NUI1 221 aa7.8□□□□□ -1.16
HNRNPC-220ENST00000555585 C11orf87Q6NUJ2 197 aa7.8□□□□□ -1.16
HNRNPC-220ENST00000555585 Q6ZRM9 215 aa7.8□□□□□ -1.16
HNRNPC-220ENST00000555585 VKORC1L1Q8N0U8 176 aa7.8□□□□□ -1.16
HNRNPC-220ENST00000555585 OR8H3Q8N146 312 aa7.8□□□□□ -1.16
HNRNPC-220ENST00000555585 OR11H4Q8NGC9 324 aa7.8□□□□□ -1.16
HNRNPC-220ENST00000555585 OR4D5Q8NGN0 318 aa7.8□□□□□ -1.16
HNRNPC-220ENST00000555585 OR4A16Q8NH70 328 aa7.8□□□□□ -1.16
HNRNPC-220ENST00000555585 GRPEL2Q8TAA5 225 aa7.8□□□□□ -1.16
HNRNPC-220ENST00000555585 OSR1Q8TAX0 266 aaPredicted RBP7.8□□□□□ -1.16
HNRNPC-220ENST00000555585 HARBI1Q96MB7 349 aa7.8□□□□□ -1.16
HNRNPC-220ENST00000555585 AIFM2Q9BRQ8 373 aa7.8□□□□□ -1.16
HNRNPC-220ENST00000555585 MS4A7Q9GZW8 240 aaPredicted RBP7.8□□□□□ -1.16
HNRNPC-220ENST00000555585 ZFP57Q9NU63 452 aa7.8□□□□□ -1.16
HNRNPC-220ENST00000555585 RCL1Q9Y2P8 373 aaKnown RBP7.8□□□□□ -1.16
HNRNPC-220ENST00000555585 ABCA2Q9BZC7 2435 aa7.8□□□□□ -1.16
HNRNPC-220ENST00000555585 IGHV1-69DA0A0B4J2H0 117 aa7.79□□□□□ -1.16
HNRNPC-220ENST00000555585 A0A1W2PPI3 338 aa7.79□□□□□ -1.16
HNRNPC-220ENST00000555585 OOSP1A8MZH6 123 aa7.79□□□□□ -1.16
HNRNPC-220ENST00000555585 J3QLI3 93 aa7.79□□□□□ -1.16
HNRNPC-220ENST00000555585 K7EPK0 472 aa7.79□□□□□ -1.16
HNRNPC-220ENST00000555585 TIMM23O14925 209 aa7.79□□□□□ -1.16
HNRNPC-220ENST00000555585 ST8SIA3O43173 380 aa7.79□□□□□ -1.16
HNRNPC-220ENST00000555585 SNAPC5O75971 98 aa7.79□□□□□ -1.16
HNRNPC-220ENST00000555585 IGHV1-69P01742 117 aa7.79□□□□□ -1.16
HNRNPC-220ENST00000555585 OR9G9P0C7N8 305 aa7.79□□□□□ -1.16
HNRNPC-220ENST00000555585 P0C879 139 aa7.79□□□□□ -1.16
HNRNPC-220ENST00000555585 SLC25A4P12235 298 aa7.79□□□□□ -1.16
HNRNPC-220ENST00000555585 PAX6P26367 422 aa7.79□□□□□ -1.16
HNRNPC-220ENST00000555585 SAA4P35542 130 aa7.79□□□□□ -1.16
HNRNPC-220ENST00000555585 NUP62P37198 522 aaPredicted RBP7.79□□□□□ -1.16
HNRNPC-220ENST00000555585 ARHGDIBP52566 201 aa7.79□□□□□ -1.16
HNRNPC-220ENST00000555585 MIDNQ504T8 468 aa7.79□□□□□ -1.16
HNRNPC-220ENST00000555585 CXorf66Q5JRM2 361 aaPredicted RBP7.79□□□□□ -1.16
HNRNPC-220ENST00000555585 RUSC1-AS1Q66K80 236 aa7.79□□□□□ -1.16
HNRNPC-220ENST00000555585 PRSS54Q6PEW0 395 aa7.79□□□□□ -1.16
HNRNPC-220ENST00000555585 ZNF546Q86UE3 836 aa7.79□□□□□ -1.16
HNRNPC-220ENST00000555585 FAM71E2Q8N5Q1 922 aa7.79□□□□□ -1.16
HNRNPC-220ENST00000555585 OR4C13Q8NGP0 309 aa7.79□□□□□ -1.16
HNRNPC-220ENST00000555585 DCUN1D4Q92564 292 aa7.79□□□□□ -1.16
HNRNPC-220ENST00000555585 MALSU1Q96EH3 234 aa7.79□□□□□ -1.16
HNRNPC-220ENST00000555585 RHOVQ96L33 236 aa7.79□□□□□ -1.16
HNRNPC-220ENST00000555585 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.79□□□□□ -1.16
HNRNPC-220ENST00000555585 TMEM140Q9NV12 185 aa7.79□□□□□ -1.16
HNRNPC-220ENST00000555585 OR5AC2Q9NZP5 309 aa7.79□□□□□ -1.16
HNRNPC-220ENST00000555585 MBD2Q9UBB5 411 aa7.79□□□□□ -1.16
HNRNPC-220ENST00000555585 NSG2Q9Y328 171 aa7.79□□□□□ -1.16
HNRNPC-220ENST00000555585 POMT1Q9Y6A1 747 aa7.79□□□□□ -1.16
HNRNPC-220ENST00000555585 APCP25054 2843 aa7.79□□□□□ -1.16
HNRNPC-220ENST00000555585 CENPEQ02224 2701 aa7.78□□□□□ -1.16
HNRNPC-220ENST00000555585 FAM90A9PA6NNJ1 464 aa7.78□□□□□ -1.16
HNRNPC-220ENST00000555585 H0YIZ8 118 aa7.78□□□□□ -1.16
HNRNPC-220ENST00000555585 L7N2F9 121 aa7.78□□□□□ -1.16
HNRNPC-220ENST00000555585 ARPC5O15511 151 aa7.78□□□□□ -1.16
HNRNPC-220ENST00000555585 PITX3O75364 302 aa7.78□□□□□ -1.16
HNRNPC-220ENST00000555585 IGHV4-38-2P0DP08 117 aa7.78□□□□□ -1.16
HNRNPC-220ENST00000555585 PVALBP20472 110 aaPredicted RBP7.78□□□□□ -1.16
HNRNPC-220ENST00000555585 CD1BP29016 333 aa7.78□□□□□ -1.16
HNRNPC-220ENST00000555585 OR2B8PP59922 312 aa7.78□□□□□ -1.16
HNRNPC-220ENST00000555585 POLR2GP62487 172 aaKnown RBP eCLIP7.78□□□□□ -1.16
HNRNPC-220ENST00000555585 VAMP2P63027 116 aa7.78□□□□□ -1.16
HNRNPC-220ENST00000555585 ID3Q02535 119 aa7.78□□□□□ -1.16
HNRNPC-220ENST00000555585 HES1Q14469 280 aa7.78□□□□□ -1.16
HNRNPC-220ENST00000555585 POU2AF1Q16633 256 aa7.78□□□□□ -1.16
HNRNPC-220ENST00000555585 VMA21Q3ZAQ7 101 aa7.78□□□□□ -1.16
HNRNPC-220ENST00000555585 OR4A47Q6IF82 309 aa7.78□□□□□ -1.16
HNRNPC-220ENST00000555585 BRD3OSQ6XYD6 125 aa7.78□□□□□ -1.16
HNRNPC-220ENST00000555585 DYNAPQ8N1N2 210 aa7.78□□□□□ -1.16
HNRNPC-220ENST00000555585 C17orf50Q8WW18 174 aa7.78□□□□□ -1.16
HNRNPC-220ENST00000555585 RNF126Q9BV68 326 aa7.78□□□□□ -1.16
HNRNPC-220ENST00000555585 MAGT1Q9H0U3 335 aa7.78□□□□□ -1.16
HNRNPC-220ENST00000555585 COA4Q9NYJ1 87 aa7.78□□□□□ -1.16
HNRNPC-220ENST00000555585 TRAV3A0A0B4J244 114 aa7.77□□□□□ -1.17
HNRNPC-220ENST00000555585 SRRM4A7MD48 611 aaKnown RBP7.77□□□□□ -1.17
HNRNPC-220ENST00000555585 HMSDA8MTL9 139 aa7.77□□□□□ -1.17
HNRNPC-220ENST00000555585 E5RGE8 158 aa7.77□□□□□ -1.17
HNRNPC-220ENST00000555585 UPK2O00526 184 aa7.77□□□□□ -1.17
HNRNPC-220ENST00000555585 SSSCA1O60232 199 aa7.77□□□□□ -1.17
HNRNPC-220ENST00000555585 MED6O75586 246 aa7.77□□□□□ -1.17
HNRNPC-220ENST00000555585 DEDDO75618 318 aa7.77□□□□□ -1.17
HNRNPC-220ENST00000555585 IFNA17P01571 189 aa7.77□□□□□ -1.17
HNRNPC-220ENST00000555585 IGKV1D-33P01593 117 aa7.77□□□□□ -1.17
HNRNPC-220ENST00000555585 IGKV1-33P01594 117 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms