RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 TCRBP04435 133 aa10.06□□□□□ -0.8
SYNE2-219ENST00000555323 NQO2P16083 231 aa10.06□□□□□ -0.8
SYNE2-219ENST00000555323 UCP1P25874 307 aa10.06□□□□□ -0.8
SYNE2-219ENST00000555323 LPAR6P43657 344 aa10.06□□□□□ -0.8
SYNE2-219ENST00000555323 KRTAP21-3Q3LHN1 58 aa10.06□□□□□ -0.8
SYNE2-219ENST00000555323 OR2B11Q5JQS5 317 aa10.06□□□□□ -0.8
SYNE2-219ENST00000555323 LIN54Q6MZP7 749 aa10.06□□□□□ -0.8
SYNE2-219ENST00000555323 Q6ZS46 218 aa10.06□□□□□ -0.8
SYNE2-219ENST00000555323 SLC25A42Q86VD7 318 aa10.06□□□□□ -0.8
SYNE2-219ENST00000555323 SGPP2Q8IWX5 399 aa10.06□□□□□ -0.8
SYNE2-219ENST00000555323 DUSP18Q8NEJ0 188 aa10.06□□□□□ -0.8
SYNE2-219ENST00000555323 GLYATL2Q8WU03 294 aa10.06□□□□□ -0.8
SYNE2-219ENST00000555323 TP53RKQ96S44 253 aa10.06□□□□□ -0.8
SYNE2-219ENST00000555323 RASL11BQ9BPW5 248 aa10.06□□□□□ -0.8
SYNE2-219ENST00000555323 NAA60Q9H7X0 242 aa10.06□□□□□ -0.8
SYNE2-219ENST00000555323 ZNF702PQ9H963 129 aa10.06□□□□□ -0.8
SYNE2-219ENST00000555323 COMMD9Q9P000 198 aa10.06□□□□□ -0.8
SYNE2-219ENST00000555323 KCNIP3Q9Y2W7 256 aa10.06□□□□□ -0.8
SYNE2-219ENST00000555323 SIGLEC9Q9Y336 463 aa10.06□□□□□ -0.8
SYNE2-219ENST00000555323 C2CD3Q4AC94 2353 aa10.06□□□□□ -0.8
SYNE2-219ENST00000555323 TEX13DA0A0J9YY54 714 aaPredicted RBP10.05□□□□□ -0.8
SYNE2-219ENST00000555323 FAM240BA0A1B0GVZ2 78 aa10.05□□□□□ -0.8
SYNE2-219ENST00000555323 PEX14O75381 377 aa10.05□□□□□ -0.8
SYNE2-219ENST00000555323 CDS2O95674 445 aa10.05□□□□□ -0.8
SYNE2-219ENST00000555323 IGHG2P01859 326 aa10.05□□□□□ -0.8
SYNE2-219ENST00000555323 MECP2P51608 486 aaKnown RBP10.05□□□□□ -0.8
SYNE2-219ENST00000555323 DEFA1P59665 94 aa10.05□□□□□ -0.8
SYNE2-219ENST00000555323 DEFA3P59666 94 aa10.05□□□□□ -0.8
SYNE2-219ENST00000555323 UBE2MP61081 183 aaKnown RBP10.05□□□□□ -0.8
SYNE2-219ENST00000555323 SUPT4H1P63272 117 aaKnown RBP10.05□□□□□ -0.8
SYNE2-219ENST00000555323 MRGPRG-AS1Q2M3A8 158 aa10.05□□□□□ -0.8
SYNE2-219ENST00000555323 ZNF562Q6V9R5 426 aa10.05□□□□□ -0.8
SYNE2-219ENST00000555323 PPP1R27Q86WC6 154 aa10.05□□□□□ -0.8
SYNE2-219ENST00000555323 PUSL1Q8N0Z8 303 aaKnown RBP10.05□□□□□ -0.8
SYNE2-219ENST00000555323 CENPSQ8N2Z9 138 aa10.05□□□□□ -0.8
SYNE2-219ENST00000555323 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.05□□□□□ -0.8
SYNE2-219ENST00000555323 TMEM158Q8WZ71 300 aa10.05□□□□□ -0.8
SYNE2-219ENST00000555323 RHOVQ96L33 236 aa10.05□□□□□ -0.8
SYNE2-219ENST00000555323 TMEM222Q9H0R3 208 aa10.05□□□□□ -0.8
SYNE2-219ENST00000555323 FBXL15Q9H469 300 aa10.05□□□□□ -0.8
SYNE2-219ENST00000555323 METTL1Q9UBP6 276 aaKnown RBP10.05□□□□□ -0.8
SYNE2-219ENST00000555323 MMP24Q9Y5R2 645 aa10.05□□□□□ -0.8
SYNE2-219ENST00000555323 A0A1B0GUS0 222 aa10.04□□□□□ -0.8
SYNE2-219ENST00000555323 FCN1O00602 326 aa10.04□□□□□ -0.8
SYNE2-219ENST00000555323 SLC25A17O43808 307 aa10.04□□□□□ -0.8
SYNE2-219ENST00000555323 OR2A4O95047 310 aa10.04□□□□□ -0.8
SYNE2-219ENST00000555323 S1PR2O95136 353 aa10.04□□□□□ -0.8
SYNE2-219ENST00000555323 IGKV1-39P01597 117 aa10.04□□□□□ -0.8
SYNE2-219ENST00000555323 IGKV1D-39P04432 117 aa10.04□□□□□ -0.8
SYNE2-219ENST00000555323 SERPINE2P07093 398 aa10.04□□□□□ -0.8
SYNE2-219ENST00000555323 FGF2P09038 288 aa10.04□□□□□ -0.8
SYNE2-219ENST00000555323 OR5AC1P0C628 307 aa10.04□□□□□ -0.8
SYNE2-219ENST00000555323 AKR1C4P17516 323 aa10.04□□□□□ -0.8
SYNE2-219ENST00000555323 COMPP49747 757 aaPredicted RBP10.04□□□□□ -0.8
SYNE2-219ENST00000555323 FOXL1Q12952 345 aa10.04□□□□□ -0.8
SYNE2-219ENST00000555323 SP6Q3SY56 376 aa10.04□□□□□ -0.8
SYNE2-219ENST00000555323 VMA21Q3ZAQ7 101 aa10.04□□□□□ -0.8
SYNE2-219ENST00000555323 OR4F5Q8NH21 305 aa10.04□□□□□ -0.8
SYNE2-219ENST00000555323 OR4A5Q8NH83 315 aa10.04□□□□□ -0.8
SYNE2-219ENST00000555323 LINC01006Q8NI28 216 aa10.04□□□□□ -0.8
SYNE2-219ENST00000555323 VSTM2AQ8TAG5 236 aa10.04□□□□□ -0.8
SYNE2-219ENST00000555323 TMEM167AQ8TBQ9 72 aa10.04□□□□□ -0.8
SYNE2-219ENST00000555323 TAF15Q92804 592 aaKnown RBP eCLIP10.04□□□□□ -0.8
SYNE2-219ENST00000555323 SEC22AQ96IW7 307 aa10.04□□□□□ -0.8
SYNE2-219ENST00000555323 TMEM56Q96MV1 263 aa10.04□□□□□ -0.8
SYNE2-219ENST00000555323 OR2A7Q96R45 310 aa10.04□□□□□ -0.8
SYNE2-219ENST00000555323 SERTAD4Q9NUC0 356 aa10.04□□□□□ -0.8
SYNE2-219ENST00000555323 BET1LQ9NYM9 111 aa10.04□□□□□ -0.8
SYNE2-219ENST00000555323 ZNF580Q9UK33 172 aa10.04□□□□□ -0.8
SYNE2-219ENST00000555323 FLVCR2Q9UPI3 526 aa10.04□□□□□ -0.8
SYNE2-219ENST00000555323 TMEM56-RWDD3S4R434 201 aa10.04□□□□□ -0.8
SYNE2-219ENST00000555323 IGHV7-81A0A0B4J1V7 117 aa10.03□□□□□ -0.8
SYNE2-219ENST00000555323 SAA1P0DJI8 122 aaPredicted RBP10.03□□□□□ -0.8
SYNE2-219ENST00000555323 RAG2P55895 527 aa10.03□□□□□ -0.8
SYNE2-219ENST00000555323 TMEM187Q14656 261 aa10.03□□□□□ -0.8
SYNE2-219ENST00000555323 OR4A47Q6IF82 309 aa10.03□□□□□ -0.8
SYNE2-219ENST00000555323 NRARPQ7Z6K4 114 aa10.03□□□□□ -0.8
SYNE2-219ENST00000555323 TMED4Q7Z7H5 227 aa10.03□□□□□ -0.8
SYNE2-219ENST00000555323 VKORC1L1Q8N0U8 176 aa10.03□□□□□ -0.8
SYNE2-219ENST00000555323 IL22RA2Q969J5 263 aa10.03□□□□□ -0.8
SYNE2-219ENST00000555323 R3HDM4Q96D70 268 aa10.03□□□□□ -0.8
SYNE2-219ENST00000555323 C20orf85Q9H1P6 137 aa10.03□□□□□ -0.8
SYNE2-219ENST00000555323 NUBP2Q9Y5Y2 271 aa10.03□□□□□ -0.8
SYNE2-219ENST00000555323 CLPSL1A2RUU4 121 aa10.02□□□□□ -0.81
SYNE2-219ENST00000555323 SH2D7A6NKC9 451 aaPredicted RBP10.02□□□□□ -0.81
SYNE2-219ENST00000555323 LINC01548A6NM66 108 aa10.02□□□□□ -0.81
SYNE2-219ENST00000555323 MARCH11A6NNE9 402 aa10.02□□□□□ -0.81
SYNE2-219ENST00000555323 ARPC1BO15143 372 aaKnown RBP10.02□□□□□ -0.81
SYNE2-219ENST00000555323 KCNAB3O43448 404 aa10.02□□□□□ -0.81
SYNE2-219ENST00000555323 KBTBD11O94819 623 aa10.02□□□□□ -0.81
SYNE2-219ENST00000555323 SFT2D2O95562 160 aa10.02□□□□□ -0.81
SYNE2-219ENST00000555323 KRASP01116 189 aa10.02□□□□□ -0.81
SYNE2-219ENST00000555323 IGF1P05019 195 aa10.02□□□□□ -0.81
SYNE2-219ENST00000555323 ANXA3P12429 323 aa10.02□□□□□ -0.81
SYNE2-219ENST00000555323 CX3CL1P78423 397 aa10.02□□□□□ -0.81
SYNE2-219ENST00000555323 SSBP2P81877 361 aaPredicted RBP10.02□□□□□ -0.81
SYNE2-219ENST00000555323 PLGLAQ15195 96 aa10.02□□□□□ -0.81
SYNE2-219ENST00000555323 PRSS8Q16651 343 aa10.02□□□□□ -0.81
SYNE2-219ENST00000555323 LRTM2Q8N967 370 aa10.02□□□□□ -0.81
SYNE2-219ENST00000555323 OR2T6Q8NHC8 308 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms