RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 J3QRK9 145 aa14.29□□□□□ -0.12
CPSF2-203ENST00000554290 AIREO43918 545 aa14.29□□□□□ -0.12
CPSF2-203ENST00000554290 MRPS14O60783 128 aaKnown RBP14.29□□□□□ -0.12
CPSF2-203ENST00000554290 FCGR3BO75015 233 aa14.29□□□□□ -0.12
CPSF2-203ENST00000554290 SCGNO76038 276 aa14.29□□□□□ -0.12
CPSF2-203ENST00000554290 CD36P16671 472 aa14.29□□□□□ -0.12
CPSF2-203ENST00000554290 ATP5G2Q06055 141 aa14.29□□□□□ -0.12
CPSF2-203ENST00000554290 HACD4Q5VWC8 232 aa14.29□□□□□ -0.12
CPSF2-203ENST00000554290 KCTD9Q7L273 389 aa14.29□□□□□ -0.12
CPSF2-203ENST00000554290 NR2C2APQ86WQ0 139 aa14.29□□□□□ -0.12
CPSF2-203ENST00000554290 ISOC1Q96CN7 298 aa14.29□□□□□ -0.12
CPSF2-203ENST00000554290 TUBA4BQ9H853 241 aa14.29□□□□□ -0.12
CPSF2-203ENST00000554290 ZNF430Q9H8G1 570 aaPredicted RBP14.29□□□□□ -0.12
CPSF2-203ENST00000554290 ADAM30Q9UKF2 790 aa14.29□□□□□ -0.12
CPSF2-203ENST00000554290 RAB26Q9ULW5 256 aa14.29□□□□□ -0.12
CPSF2-203ENST00000554290 NOTOA8MTQ0 251 aa14.28□□□□□ -0.12
CPSF2-203ENST00000554290 TUSC2O75896 110 aa14.28□□□□□ -0.12
CPSF2-203ENST00000554290 HLA-DQB1P01920 261 aa14.28□□□□□ -0.12
CPSF2-203ENST00000554290 SAA1P0DJI8 122 aaPredicted RBP14.28□□□□□ -0.12
CPSF2-203ENST00000554290 GABARAPL2P60520 117 aa14.28□□□□□ -0.12
CPSF2-203ENST00000554290 EXOSC2Q13868 293 aaKnown RBP14.28□□□□□ -0.12
CPSF2-203ENST00000554290 FAM209BQ5JX69 171 aa14.28□□□□□ -0.12
CPSF2-203ENST00000554290 SLC25A42Q86VD7 318 aa14.28□□□□□ -0.12
CPSF2-203ENST00000554290 OR2K2Q8NGT1 345 aa14.28□□□□□ -0.12
CPSF2-203ENST00000554290 SPATA25Q9BR10 227 aa14.28□□□□□ -0.12
CPSF2-203ENST00000554290 AKIP1Q9NQ31 210 aa14.28□□□□□ -0.12
CPSF2-203ENST00000554290 TRBV9A0A0B4J1U6 114 aa14.27□□□□□ -0.13
CPSF2-203ENST00000554290 SMIM30A4D0T7 59 aa14.27□□□□□ -0.13
CPSF2-203ENST00000554290 RBMXL2O75526 392 aaKnown RBP14.27□□□□□ -0.13
CPSF2-203ENST00000554290 NFYAP23511 347 aaPredicted RBP14.27□□□□□ -0.13
CPSF2-203ENST00000554290 FGF9P31371 208 aaPredicted RBP14.27□□□□□ -0.13
CPSF2-203ENST00000554290 CNIH2Q6PI25 160 aa14.27□□□□□ -0.13
CPSF2-203ENST00000554290 TPRA1Q86W33 373 aa14.27□□□□□ -0.13
CPSF2-203ENST00000554290 TTC9CQ8N5M4 171 aa14.27□□□□□ -0.13
CPSF2-203ENST00000554290 NECAP1Q8NC96 275 aa14.27□□□□□ -0.13
CPSF2-203ENST00000554290 VSTM2AQ8TAG5 236 aa14.27□□□□□ -0.13
CPSF2-203ENST00000554290 TXNL4BQ9NX01 149 aaKnown RBP14.27□□□□□ -0.13
CPSF2-203ENST00000554290 RBMX2Q9Y388 322 aaKnown RBP14.27□□□□□ -0.13
CPSF2-203ENST00000554290 RYR3Q15413 4870 aa14.27□□□□□ -0.13
CPSF2-203ENST00000554290 BMPR1BO00238 502 aa14.26□□□□□ -0.13
CPSF2-203ENST00000554290 PRH1P02810 166 aa14.26□□□□□ -0.13
CPSF2-203ENST00000554290 PSMB9P28065 219 aa14.26□□□□□ -0.13
CPSF2-203ENST00000554290 GNG2P59768 71 aa14.26□□□□□ -0.13
CPSF2-203ENST00000554290 HAGHQ16775 308 aa14.26□□□□□ -0.13
CPSF2-203ENST00000554290 UBE2UQ5VVX9 321 aa14.26□□□□□ -0.13
CPSF2-203ENST00000554290 HSD17B10Q99714 261 aaKnown RBP14.26□□□□□ -0.13
CPSF2-203ENST00000554290 OR51E2Q9H255 320 aa14.26□□□□□ -0.13
CPSF2-203ENST00000554290 DAPK2Q9UIK4 370 aa14.26□□□□□ -0.13
CPSF2-203ENST00000554290 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.25□□□□□ -0.13
CPSF2-203ENST00000554290 IFNA6P05013 189 aa14.25□□□□□ -0.13
CPSF2-203ENST00000554290 ZNF45Q02386 682 aa14.25□□□□□ -0.13
CPSF2-203ENST00000554290 OR2B11Q5JQS5 317 aa14.25□□□□□ -0.13
CPSF2-203ENST00000554290 C10orf55Q5SWW7 151 aa14.25□□□□□ -0.13
CPSF2-203ENST00000554290 OR4S2Q8NH73 311 aa14.25□□□□□ -0.13
CPSF2-203ENST00000554290 NUDCD2Q8WVJ2 157 aa14.25□□□□□ -0.13
CPSF2-203ENST00000554290 FCGR1BQ92637 280 aa14.25□□□□□ -0.13
CPSF2-203ENST00000554290 KCTD12Q96CX2 325 aaKnown RBP14.25□□□□□ -0.13
CPSF2-203ENST00000554290 THAP7Q9BT49 309 aaPredicted RBP14.25□□□□□ -0.13
CPSF2-203ENST00000554290 TMEM235A6NFC5 223 aa14.24□□□□□ -0.13
CPSF2-203ENST00000554290 MAS1LP35410 378 aa14.24□□□□□ -0.13
CPSF2-203ENST00000554290 MECP2P51608 486 aaKnown RBP14.24□□□□□ -0.13
CPSF2-203ENST00000554290 RPL30P62888 115 aaKnown RBP14.24□□□□□ -0.13
CPSF2-203ENST00000554290 ZFAND6Q6FIF0 208 aa14.24□□□□□ -0.13
CPSF2-203ENST00000554290 TCTEX1D2Q8WW35 142 aa14.24□□□□□ -0.13
CPSF2-203ENST00000554290 OR2A7Q96R45 310 aa14.24□□□□□ -0.13
CPSF2-203ENST00000554290 EDA2RQ9HAV5 297 aa14.24□□□□□ -0.13
CPSF2-203ENST00000554290 ANXA10Q9UJ72 324 aa14.24□□□□□ -0.13
CPSF2-203ENST00000554290 SPATA2Q9UM82 520 aa14.24□□□□□ -0.13
CPSF2-203ENST00000554290 SSR3Q9UNL2 185 aa14.24□□□□□ -0.13
CPSF2-203ENST00000554290 ZNF257Q9Y2Q1 563 aa14.24□□□□□ -0.13
CPSF2-203ENST00000554290 RRP15Q9Y3B9 282 aaKnown RBP14.24□□□□□ -0.13
CPSF2-203ENST00000554290 IGKV1D-13A0A0B4J2D9 117 aa14.23□□□□□ -0.13
CPSF2-203ENST00000554290 DPPA5A6NC42 116 aa14.23□□□□□ -0.13
CPSF2-203ENST00000554290 IZUMO1RA6ND01 250 aa14.23□□□□□ -0.13
CPSF2-203ENST00000554290 OR2J3O76001 311 aa14.23□□□□□ -0.13
CPSF2-203ENST00000554290 IGLV2-14P01704 120 aa14.23□□□□□ -0.13
CPSF2-203ENST00000554290 IGKV1-13P0DP09 117 aa14.23□□□□□ -0.13
CPSF2-203ENST00000554290 C15orf32Q32M92 178 aa14.23□□□□□ -0.13
CPSF2-203ENST00000554290 LAX1Q8IWV1 398 aa14.23□□□□□ -0.13
CPSF2-203ENST00000554290 VKORC1L1Q8N0U8 176 aa14.23□□□□□ -0.13
CPSF2-203ENST00000554290 SPARTQ8N0X7 666 aa14.23□□□□□ -0.13
CPSF2-203ENST00000554290 TMEM167AQ8TBQ9 72 aa14.23□□□□□ -0.13
CPSF2-203ENST00000554290 HMX3A6NHT5 357 aa14.22□□□□□ -0.13
CPSF2-203ENST00000554290 SSX5O60225 188 aa14.22□□□□□ -0.13
CPSF2-203ENST00000554290 KBTBD11O94819 623 aa14.22□□□□□ -0.13
CPSF2-203ENST00000554290 HRASP01112 189 aa14.22□□□□□ -0.13
CPSF2-203ENST00000554290 RPL27AP46776 148 aaKnown RBP14.22□□□□□ -0.13
CPSF2-203ENST00000554290 SFXN4Q6P4A7 337 aa14.22□□□□□ -0.13
CPSF2-203ENST00000554290 ZNF66Q6ZN08 573 aa14.22□□□□□ -0.13
CPSF2-203ENST00000554290 MFSD4AQ8N468 514 aa14.22□□□□□ -0.13
CPSF2-203ENST00000554290 LGALS14Q8TCE9 139 aa14.22□□□□□ -0.13
CPSF2-203ENST00000554290 DYNLRB2Q8TF09 96 aa14.22□□□□□ -0.13
CPSF2-203ENST00000554290 SLC2A9Q9NRM0 540 aa14.22□□□□□ -0.13
CPSF2-203ENST00000554290 SLC2A8Q9NY64 477 aa14.22□□□□□ -0.13
CPSF2-203ENST00000554290 LCE6AA0A183 80 aa14.21□□□□□ -0.13
CPSF2-203ENST00000554290 NPIPB5A8MRT5 1133 aa14.21□□□□□ -0.13
CPSF2-203ENST00000554290 TEX22C9J3V5 150 aa14.21□□□□□ -0.13
CPSF2-203ENST00000554290 GGCTO75223 188 aaKnown RBP14.21□□□□□ -0.13
CPSF2-203ENST00000554290 TPPPO94811 219 aa14.21□□□□□ -0.13
CPSF2-203ENST00000554290 DHFRP00374 187 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms