RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 ABHD5Q8WTS1 349 aa8.36□□□□□ -1.07
PTCH1-225ENST00000551845 PARP11Q9NR21 331 aa8.36□□□□□ -1.07
PTCH1-225ENST00000551845 ZFP57Q9NU63 452 aa8.36□□□□□ -1.07
PTCH1-225ENST00000551845 ZNF580Q9UK33 172 aa8.36□□□□□ -1.07
PTCH1-225ENST00000551845 TSSC4Q9Y5U2 329 aaPredicted RBP8.36□□□□□ -1.07
PTCH1-225ENST00000551845 WSB1Q9Y6I7 421 aa8.36□□□□□ -1.07
PTCH1-225ENST00000551845 TRAV41A0A0B4J266 112 aa8.35□□□□□ -1.07
PTCH1-225ENST00000551845 ATP6V0E1O15342 81 aa8.35□□□□□ -1.07
PTCH1-225ENST00000551845 CREBL2O60519 120 aaPredicted RBP8.35□□□□□ -1.07
PTCH1-225ENST00000551845 HPRT1P00492 218 aa8.35□□□□□ -1.07
PTCH1-225ENST00000551845 CA2P00918 260 aa8.35□□□□□ -1.07
PTCH1-225ENST00000551845 ELANEP08246 267 aa8.35□□□□□ -1.07
PTCH1-225ENST00000551845 AKAIN1P0CW23 69 aa8.35□□□□□ -1.07
PTCH1-225ENST00000551845 BRWD1-AS2P59051 145 aa8.35□□□□□ -1.07
PTCH1-225ENST00000551845 NSUN5P1Q3KNT7 163 aa8.35□□□□□ -1.07
PTCH1-225ENST00000551845 SCGB2B2Q4G0G5 96 aa8.35□□□□□ -1.07
PTCH1-225ENST00000551845 C10orf99Q6UWK7 81 aa8.35□□□□□ -1.07
PTCH1-225ENST00000551845 CCDC190Q86UF4 302 aa8.35□□□□□ -1.07
PTCH1-225ENST00000551845 SLC38A6Q8IZM9 456 aa8.35□□□□□ -1.07
PTCH1-225ENST00000551845 TCTEX1D1Q8N7M0 179 aa8.35□□□□□ -1.07
PTCH1-225ENST00000551845 OR6Q1Q8NGQ2 317 aa8.35□□□□□ -1.07
PTCH1-225ENST00000551845 OR51H1Q8NH63 302 aa8.35□□□□□ -1.07
PTCH1-225ENST00000551845 VSTM2AQ8TAG5 236 aa8.35□□□□□ -1.07
PTCH1-225ENST00000551845 GPHA2Q96T91 129 aa8.35□□□□□ -1.07
PTCH1-225ENST00000551845 RSRP1Q9BUV0 290 aa8.35□□□□□ -1.07
PTCH1-225ENST00000551845 NUBP2Q9Y5Y2 271 aa8.35□□□□□ -1.07
PTCH1-225ENST00000551845 CMYA5Q8N3K9 4069 aa8.34□□□□□ -1.07
PTCH1-225ENST00000551845 PRKDCP78527 4128 aaKnown RBP8.34□□□□□ -1.07
PTCH1-225ENST00000551845 G3V318 75 aa8.34□□□□□ -1.07
PTCH1-225ENST00000551845 RBFOX2O43251 390 aaKnown RBP eCLIP8.34□□□□□ -1.07
PTCH1-225ENST00000551845 ACTL6BO94805 426 aa8.34□□□□□ -1.07
PTCH1-225ENST00000551845 OR2A4O95047 310 aa8.34□□□□□ -1.07
PTCH1-225ENST00000551845 PGAM2P15259 253 aa8.34□□□□□ -1.07
PTCH1-225ENST00000551845 F2RP25116 425 aa8.34□□□□□ -1.07
PTCH1-225ENST00000551845 CD40LGP29965 261 aa8.34□□□□□ -1.07
PTCH1-225ENST00000551845 ETV6P41212 452 aa8.34□□□□□ -1.07
PTCH1-225ENST00000551845 GNB1P62873 340 aa8.34□□□□□ -1.07
PTCH1-225ENST00000551845 AKIRIN2Q53H80 203 aa8.34□□□□□ -1.07
PTCH1-225ENST00000551845 TCTEX1D4Q5JR98 221 aa8.34□□□□□ -1.07
PTCH1-225ENST00000551845 CXorf66Q5JRM2 361 aaPredicted RBP8.34□□□□□ -1.07
PTCH1-225ENST00000551845 KHDC1LQ5JSQ8 128 aa8.34□□□□□ -1.07
PTCH1-225ENST00000551845 TMEM65Q6PI78 240 aa8.34□□□□□ -1.07
PTCH1-225ENST00000551845 LHFPL1Q86WI0 220 aa8.34□□□□□ -1.07
PTCH1-225ENST00000551845 Q8N402 240 aa8.34□□□□□ -1.07
PTCH1-225ENST00000551845 LFNGQ8NES3 379 aa8.34□□□□□ -1.07
PTCH1-225ENST00000551845 OR4F17Q8NGA8 305 aa8.34□□□□□ -1.07
PTCH1-225ENST00000551845 ZFAND1Q8TCF1 268 aa8.34□□□□□ -1.07
PTCH1-225ENST00000551845 ZNF486Q96H40 463 aaPredicted RBP8.34□□□□□ -1.07
PTCH1-225ENST00000551845 RHOVQ96L33 236 aa8.34□□□□□ -1.07
PTCH1-225ENST00000551845 TMEM68Q96MH6 324 aa8.34□□□□□ -1.07
PTCH1-225ENST00000551845 OR2A7Q96R45 310 aa8.34□□□□□ -1.07
PTCH1-225ENST00000551845 OR4F4Q96R69 305 aa8.34□□□□□ -1.07
PTCH1-225ENST00000551845 ANKRD20A5PA0PJZ0 165 aa8.33□□□□□ -1.08
PTCH1-225ENST00000551845 A6NHS1 94 aa8.33□□□□□ -1.08
PTCH1-225ENST00000551845 RAMP3O60896 148 aa8.33□□□□□ -1.08
PTCH1-225ENST00000551845 IGHG4P01861 327 aa8.33□□□□□ -1.08
PTCH1-225ENST00000551845 RLN1P04808 185 aa8.33□□□□□ -1.08
PTCH1-225ENST00000551845 ZNF735P0CB33 412 aa8.33□□□□□ -1.08
PTCH1-225ENST00000551845 NQO2P16083 231 aa8.33□□□□□ -1.08
PTCH1-225ENST00000551845 PPIFP30405 207 aaKnown RBP8.33□□□□□ -1.08
PTCH1-225ENST00000551845 ECI1P42126 302 aa8.33□□□□□ -1.08
PTCH1-225ENST00000551845 LPAR6P43657 344 aa8.33□□□□□ -1.08
PTCH1-225ENST00000551845 TAS2R31P59538 309 aa8.33□□□□□ -1.08
PTCH1-225ENST00000551845 AP3S2P59780 193 aa8.33□□□□□ -1.08
PTCH1-225ENST00000551845 PJVKQ0ZLH3 352 aa8.33□□□□□ -1.08
PTCH1-225ENST00000551845 FOXE3Q13461 319 aa8.33□□□□□ -1.08
PTCH1-225ENST00000551845 PRSS8Q16651 343 aa8.33□□□□□ -1.08
PTCH1-225ENST00000551845 PHLDA2Q53GA4 152 aa8.33□□□□□ -1.08
PTCH1-225ENST00000551845 FOXB2Q5VYV0 432 aa8.33□□□□□ -1.08
PTCH1-225ENST00000551845 UNQ5815/PRO19632Q6UWF5 114 aa8.33□□□□□ -1.08
PTCH1-225ENST00000551845 IDO2Q6ZQW0 420 aa8.33□□□□□ -1.08
PTCH1-225ENST00000551845 MMD2Q8IY49 270 aa8.33□□□□□ -1.08
PTCH1-225ENST00000551845 VKORC1L1Q8N0U8 176 aa8.33□□□□□ -1.08
PTCH1-225ENST00000551845 TOMM5Q8N4H5 51 aa8.33□□□□□ -1.08
PTCH1-225ENST00000551845 MINDY2Q8NBR6 621 aa8.33□□□□□ -1.08
PTCH1-225ENST00000551845 OR4D10Q8NGI6 311 aa8.33□□□□□ -1.08
PTCH1-225ENST00000551845 FAM110DQ8TAY7 271 aaPredicted RBP8.33□□□□□ -1.08
PTCH1-225ENST00000551845 ARPC1AQ92747 370 aa8.33□□□□□ -1.08
PTCH1-225ENST00000551845 R3HDM4Q96D70 268 aa8.33□□□□□ -1.08
PTCH1-225ENST00000551845 PRRT1Q99946 306 aa8.33□□□□□ -1.08
PTCH1-225ENST00000551845 FAM103A1Q9BTL3 118 aaKnown RBP8.33□□□□□ -1.08
PTCH1-225ENST00000551845 FXYD6Q9H0Q3 95 aa8.33□□□□□ -1.08
PTCH1-225ENST00000551845 PLEKHA2Q9HB19 425 aa8.33□□□□□ -1.08
PTCH1-225ENST00000551845 SCP2D1Q9UJQ7 156 aa8.33□□□□□ -1.08
PTCH1-225ENST00000551845 V9GYH0 126 aa8.33□□□□□ -1.08
PTCH1-225ENST00000551845 A0A1W2PN81 502 aa8.32□□□□□ -1.08
PTCH1-225ENST00000551845 A0A1W2PRX2 142 aa8.32□□□□□ -1.08
PTCH1-225ENST00000551845 MSGN1A6NI15 193 aa8.32□□□□□ -1.08
PTCH1-225ENST00000551845 ARPC1BO15143 372 aaKnown RBP8.32□□□□□ -1.08
PTCH1-225ENST00000551845 MPPED1O15442 326 aa8.32□□□□□ -1.08
PTCH1-225ENST00000551845 SAA1P0DJI8 122 aaPredicted RBP8.32□□□□□ -1.08
PTCH1-225ENST00000551845 EGR2P11161 476 aaPredicted RBP8.32□□□□□ -1.08
PTCH1-225ENST00000551845 FAUP35544 74 aaKnown RBP8.32□□□□□ -1.08
PTCH1-225ENST00000551845 CHRNA7P36544 502 aa8.32□□□□□ -1.08
PTCH1-225ENST00000551845 RAB9AP51151 201 aa8.32□□□□□ -1.08
PTCH1-225ENST00000551845 CRIP2P52943 208 aaPredicted RBP8.32□□□□□ -1.08
PTCH1-225ENST00000551845 CFHR3Q02985 330 aa8.32□□□□□ -1.08
PTCH1-225ENST00000551845 TNXAQ16473 311 aa8.32□□□□□ -1.08
PTCH1-225ENST00000551845 ECSCRQ19T08 205 aa8.32□□□□□ -1.08
PTCH1-225ENST00000551845 SSX9Q7RTT3 188 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms