RNA–Protein interactions for RNA: ENST00000548821.1

GCN1-205, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 504 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-205ENST00000548821 ANKRD55Q3KP44 614 aa7.4□□□□□ -1.22
GCN1-205ENST00000548821 FAM106AQ4KMX7 169 aa7.4□□□□□ -1.22
GCN1-205ENST00000548821 IZUMO2Q6UXV1 221 aa7.4□□□□□ -1.22
GCN1-205ENST00000548821 ZNF66Q6ZN08 573 aa7.4□□□□□ -1.22
GCN1-205ENST00000548821 KCTD9Q7L273 389 aa7.4□□□□□ -1.22
GCN1-205ENST00000548821 CROCCP3Q8IVE0 287 aa7.4□□□□□ -1.22
GCN1-205ENST00000548821 TTC9CQ8N5M4 171 aa7.4□□□□□ -1.22
GCN1-205ENST00000548821 CD300LFQ8TDQ1 290 aa7.4□□□□□ -1.22
GCN1-205ENST00000548821 CASTOR1Q8WTX7 329 aa7.4□□□□□ -1.22
GCN1-205ENST00000548821 SRSF12Q8WXF0 261 aaKnown RBP7.4□□□□□ -1.22
GCN1-205ENST00000548821 CITED4Q96RK1 184 aa7.4□□□□□ -1.22
GCN1-205ENST00000548821 GFI1Q99684 422 aa7.4□□□□□ -1.22
GCN1-205ENST00000548821 PARP12Q9H0J9 701 aaKnown RBP7.4□□□□□ -1.22
GCN1-205ENST00000548821 OR51E2Q9H255 320 aa7.4□□□□□ -1.22
GCN1-205ENST00000548821 DIABLOQ9NR28 239 aa7.4□□□□□ -1.22
GCN1-205ENST00000548821 TECRQ9NZ01 308 aaKnown RBP7.4□□□□□ -1.22
GCN1-205ENST00000548821 NKX1-2Q9UD57 310 aaPredicted RBP7.4□□□□□ -1.22
GCN1-205ENST00000548821 ZNF257Q9Y2Q1 563 aa7.4□□□□□ -1.22
GCN1-205ENST00000548821 FCGR3BO75015 233 aa7.39□□□□□ -1.23
GCN1-205ENST00000548821 GGCTO75223 188 aaKnown RBP7.39□□□□□ -1.23
GCN1-205ENST00000548821 IGLV2-23P01705 113 aa7.39□□□□□ -1.23
GCN1-205ENST00000548821 IGHV4-30-4P0DP06 118 aa7.39□□□□□ -1.23
GCN1-205ENST00000548821 DEFA4P12838 97 aa7.39□□□□□ -1.23
GCN1-205ENST00000548821 CBX5P45973 191 aa7.39□□□□□ -1.23
GCN1-205ENST00000548821 SYNJ2BPP57105 145 aa7.39□□□□□ -1.23
GCN1-205ENST00000548821 CATR1Q13166 79 aa7.39□□□□□ -1.23
GCN1-205ENST00000548821 C22orf42Q6IC83 251 aa7.39□□□□□ -1.23
GCN1-205ENST00000548821 OR4A47Q6IF82 309 aa7.39□□□□□ -1.23
GCN1-205ENST00000548821 OVCH2Q7RTZ1 564 aa7.39□□□□□ -1.23
GCN1-205ENST00000548821 OR4A5Q8NH83 315 aa7.39□□□□□ -1.23
GCN1-205ENST00000548821 DYNLRB2Q8TF09 96 aa7.39□□□□□ -1.23
GCN1-205ENST00000548821 OR2A7Q96R45 310 aa7.39□□□□□ -1.23
GCN1-205ENST00000548821 ZNF230Q9UIE0 474 aaPredicted RBP7.39□□□□□ -1.23
GCN1-205ENST00000548821 KCNK7Q9Y2U2 307 aa7.39□□□□□ -1.23
GCN1-205ENST00000548821 ETV7Q9Y603 341 aa7.39□□□□□ -1.23
GCN1-205ENST00000548821 SHISA3A0PJX4 238 aa7.38□□□□□ -1.23
GCN1-205ENST00000548821 TPPPO94811 219 aa7.38□□□□□ -1.23
GCN1-205ENST00000548821 PSMB9P28065 219 aa7.38□□□□□ -1.23
GCN1-205ENST00000548821 S100GP29377 79 aa7.38□□□□□ -1.23
GCN1-205ENST00000548821 RHOGP84095 191 aa7.38□□□□□ -1.23
GCN1-205ENST00000548821 PJVKQ0ZLH3 352 aa7.38□□□□□ -1.23
GCN1-205ENST00000548821 TIMM50Q3ZCQ8 353 aa7.38□□□□□ -1.23
GCN1-205ENST00000548821 CASC10Q5T4H9 136 aa7.38□□□□□ -1.23
GCN1-205ENST00000548821 UBE2UQ5VVX9 321 aa7.38□□□□□ -1.23
GCN1-205ENST00000548821 THOC7Q6I9Y2 204 aaKnown RBP7.38□□□□□ -1.23
GCN1-205ENST00000548821 SLC16A13Q7RTY0 426 aa7.38□□□□□ -1.23
GCN1-205ENST00000548821 HSD17B13Q7Z5P4 300 aaPredicted RBP7.38□□□□□ -1.23
GCN1-205ENST00000548821 ADAD2Q8NCV1 583 aaKnown RBP7.38□□□□□ -1.23
GCN1-205ENST00000548821 TCTEX1D2Q8WW35 142 aa7.38□□□□□ -1.23
GCN1-205ENST00000548821 NRG4Q8WWG1 115 aa7.38□□□□□ -1.23
GCN1-205ENST00000548821 DDB2Q92466 427 aa7.38□□□□□ -1.23
GCN1-205ENST00000548821 CXorf58Q96LI9 332 aa7.38□□□□□ -1.23
GCN1-205ENST00000548821 TM2D3Q9BRN9 247 aa7.38□□□□□ -1.23
GCN1-205ENST00000548821 C19orf73Q9NVV2 129 aa7.38□□□□□ -1.23
GCN1-205ENST00000548821 ANXA10Q9UJ72 324 aa7.38□□□□□ -1.23
GCN1-205ENST00000548821 RBMX2Q9Y388 322 aaKnown RBP7.38□□□□□ -1.23
GCN1-205ENST00000548821 COL7A1Q02388 2944 aa7.37□□□□□ -1.23
GCN1-205ENST00000548821 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.37□□□□□ -1.23
GCN1-205ENST00000548821 TRBV9A0A0B4J1U6 114 aa7.37□□□□□ -1.23
GCN1-205ENST00000548821 TRIM64CA6NLI5 447 aa7.37□□□□□ -1.23
GCN1-205ENST00000548821 SRRM4A7MD48 611 aaKnown RBP7.37□□□□□ -1.23
GCN1-205ENST00000548821 NPIPB5A8MRT5 1133 aa7.37□□□□□ -1.23
GCN1-205ENST00000548821 LGALS9O00182 355 aa7.37□□□□□ -1.23
GCN1-205ENST00000548821 FGF2P09038 288 aa7.37□□□□□ -1.23
GCN1-205ENST00000548821 RPL27AP46776 148 aaKnown RBP7.37□□□□□ -1.23
GCN1-205ENST00000548821 OR10A3P58181 314 aa7.37□□□□□ -1.23
GCN1-205ENST00000548821 EXOSC2Q13868 293 aaKnown RBP7.37□□□□□ -1.23
GCN1-205ENST00000548821 MFSD4AQ8N468 514 aa7.37□□□□□ -1.23
GCN1-205ENST00000548821 EEF1AKMT3Q96AZ1 226 aa7.37□□□□□ -1.23
GCN1-205ENST00000548821 RBMXL1Q96E39 390 aaKnown RBP7.37□□□□□ -1.23
GCN1-205ENST00000548821 SRSF8Q9BRL6 282 aaKnown RBP7.37□□□□□ -1.23
GCN1-205ENST00000548821 ZNF430Q9H8G1 570 aaPredicted RBP7.37□□□□□ -1.23
GCN1-205ENST00000548821 VCX3AQ9NNX9 186 aa7.37□□□□□ -1.23
GCN1-205ENST00000548821 SLC2A9Q9NRM0 540 aa7.37□□□□□ -1.23
GCN1-205ENST00000548821 TXNL4BQ9NX01 149 aaKnown RBP7.37□□□□□ -1.23
GCN1-205ENST00000548821 DAPK2Q9UIK4 370 aa7.37□□□□□ -1.23
GCN1-205ENST00000548821 RRP15Q9Y3B9 282 aaKnown RBP7.37□□□□□ -1.23
GCN1-205ENST00000548821 TRBV7-1A0A0A6YYK4 115 aa7.36□□□□□ -1.23
GCN1-205ENST00000548821 ANKRD65E5RJM6 399 aa7.36□□□□□ -1.23
GCN1-205ENST00000548821 RBFOX2O43251 390 aaKnown RBP eCLIP7.36□□□□□ -1.23
GCN1-205ENST00000548821 KBTBD11O94819 623 aa7.36□□□□□ -1.23
GCN1-205ENST00000548821 CSN3P07498 182 aa7.36□□□□□ -1.23
GCN1-205ENST00000548821 SAA1P0DJI8 122 aaPredicted RBP7.36□□□□□ -1.23
GCN1-205ENST00000548821 NFYAP23511 347 aaPredicted RBP7.36□□□□□ -1.23
GCN1-205ENST00000548821 LINC00205P59089 165 aa7.36□□□□□ -1.23
GCN1-205ENST00000548821 RPL8P62917 257 aaKnown RBP7.36□□□□□ -1.23
GCN1-205ENST00000548821 DYRK1AQ13627 763 aa7.36□□□□□ -1.23
GCN1-205ENST00000548821 C15orf32Q32M92 178 aa7.36□□□□□ -1.23
GCN1-205ENST00000548821 SFXN4Q6P4A7 337 aa7.36□□□□□ -1.23
GCN1-205ENST00000548821 GPHB5Q86YW7 130 aa7.36□□□□□ -1.23
GCN1-205ENST00000548821 Q8N1Y9 231 aa7.36□□□□□ -1.23
GCN1-205ENST00000548821 BEST4Q8NFU0 473 aa7.36□□□□□ -1.23
GCN1-205ENST00000548821 OR1L6Q8NGR2 347 aa7.36□□□□□ -1.23
GCN1-205ENST00000548821 TMEM167AQ8TBQ9 72 aa7.36□□□□□ -1.23
GCN1-205ENST00000548821 MAFIPQ8WZ33 124 aa7.36□□□□□ -1.23
GCN1-205ENST00000548821 MARC2Q969Z3 335 aa7.36□□□□□ -1.23
GCN1-205ENST00000548821 S100A16Q96FQ6 103 aaKnown RBP7.36□□□□□ -1.23
GCN1-205ENST00000548821 COMMD5Q9GZQ3 224 aa7.36□□□□□ -1.23
GCN1-205ENST00000548821 AKIP1Q9NQ31 210 aa7.36□□□□□ -1.23
GCN1-205ENST00000548821 RHBDL2Q9NX52 303 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms