RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 AKR1C4P17516 323 aa12.9□□□□□ -0.34
LIMS2-217ENST00000545738 NDPQ00604 133 aa12.9□□□□□ -0.34
LIMS2-217ENST00000545738 TAGLNQ01995 201 aaKnown RBP12.9□□□□□ -0.34
LIMS2-217ENST00000545738 DCTN2Q13561 401 aaKnown RBP12.9□□□□□ -0.34
LIMS2-217ENST00000545738 C5orf64Q2M2E5 130 aa12.9□□□□□ -0.34
LIMS2-217ENST00000545738 NRARPQ7Z6K4 114 aa12.9□□□□□ -0.34
LIMS2-217ENST00000545738 OSR1Q8TAX0 266 aaPredicted RBP12.9□□□□□ -0.34
LIMS2-217ENST00000545738 GLYATL2Q8WU03 294 aa12.9□□□□□ -0.34
LIMS2-217ENST00000545738 LIN7CQ9NUP9 197 aaKnown RBP12.9□□□□□ -0.34
LIMS2-217ENST00000545738 H0Y980 276 aa12.89□□□□□ -0.35
LIMS2-217ENST00000545738 TCRBP04435 133 aa12.89□□□□□ -0.35
LIMS2-217ENST00000545738 ANXA7P20073 488 aaKnown RBP12.89□□□□□ -0.35
LIMS2-217ENST00000545738 LPAR6P43657 344 aa12.89□□□□□ -0.35
LIMS2-217ENST00000545738 SSX9Q7RTT3 188 aa12.89□□□□□ -0.35
LIMS2-217ENST00000545738 RNF5Q99942 180 aa12.89□□□□□ -0.35
LIMS2-217ENST00000545738 C20orf85Q9H1P6 137 aa12.89□□□□□ -0.35
LIMS2-217ENST00000545738 METTL1Q9UBP6 276 aaKnown RBP12.89□□□□□ -0.35
LIMS2-217ENST00000545738 DNHD1Q96M86 4753 aa12.88□□□□□ -0.35
LIMS2-217ENST00000545738 RNF212BA8MTL3 300 aa12.88□□□□□ -0.35
LIMS2-217ENST00000545738 TSPAN9O75954 239 aa12.88□□□□□ -0.35
LIMS2-217ENST00000545738 SPNP16150 400 aa12.88□□□□□ -0.35
LIMS2-217ENST00000545738 KIR2DS2P43631 304 aa12.88□□□□□ -0.35
LIMS2-217ENST00000545738 DHODHQ02127 395 aa12.88□□□□□ -0.35
LIMS2-217ENST00000545738 PPP1R1AQ13522 171 aa12.88□□□□□ -0.35
LIMS2-217ENST00000545738 Q8N2B8 174 aa12.88□□□□□ -0.35
LIMS2-217ENST00000545738 POC5Q8NA72 575 aa12.88□□□□□ -0.35
LIMS2-217ENST00000545738 OR8H1Q8NGG4 311 aa12.88□□□□□ -0.35
LIMS2-217ENST00000545738 RHOVQ96L33 236 aa12.88□□□□□ -0.35
LIMS2-217ENST00000545738 CLCC1Q96S66 551 aa12.88□□□□□ -0.35
LIMS2-217ENST00000545738 NPFFR1Q9GZQ6 430 aa12.88□□□□□ -0.35
LIMS2-217ENST00000545738 BEX1Q9HBH7 125 aa12.88□□□□□ -0.35
LIMS2-217ENST00000545738 RAB18Q9NP72 206 aa12.88□□□□□ -0.35
LIMS2-217ENST00000545738 NUDT15Q9NV35 164 aa12.88□□□□□ -0.35
LIMS2-217ENST00000545738 TET2Q6N021 2002 aaPredicted RBP12.88□□□□□ -0.35
LIMS2-217ENST00000545738 TRAV6A0A075B6T7 132 aa12.88□□□□□ -0.35
LIMS2-217ENST00000545738 IGHV7-81A0A0B4J1V7 117 aa12.88□□□□□ -0.35
LIMS2-217ENST00000545738 TRAV3A0A0B4J244 114 aa12.88□□□□□ -0.35
LIMS2-217ENST00000545738 HPRT1P00492 218 aa12.88□□□□□ -0.35
LIMS2-217ENST00000545738 HKR1P10072 659 aa12.88□□□□□ -0.35
LIMS2-217ENST00000545738 MDKP21741 143 aaPredicted RBP12.88□□□□□ -0.35
LIMS2-217ENST00000545738 UCP1P25874 307 aa12.88□□□□□ -0.35
LIMS2-217ENST00000545738 G6PCP35575 357 aa12.88□□□□□ -0.35
LIMS2-217ENST00000545738 LGALS7P47929 136 aa12.88□□□□□ -0.35
LIMS2-217ENST00000545738 RPL15P61313 204 aaKnown RBP12.88□□□□□ -0.35
LIMS2-217ENST00000545738 SLC25A42Q86VD7 318 aa12.88□□□□□ -0.35
LIMS2-217ENST00000545738 PUSL1Q8N0Z8 303 aaKnown RBP12.88□□□□□ -0.35
LIMS2-217ENST00000545738 CENPSQ8N2Z9 138 aa12.88□□□□□ -0.35
LIMS2-217ENST00000545738 CCDC71LQ8N9Z2 235 aa12.88□□□□□ -0.35
LIMS2-217ENST00000545738 LINC01006Q8NI28 216 aa12.88□□□□□ -0.35
LIMS2-217ENST00000545738 PLEKHA2Q9HB19 425 aa12.88□□□□□ -0.35
LIMS2-217ENST00000545738 SERTAD4Q9NUC0 356 aa12.88□□□□□ -0.35
LIMS2-217ENST00000545738 FBXO7Q9Y3I1 522 aa12.88□□□□□ -0.35
LIMS2-217ENST00000545738 TEX13DA0A0J9YY54 714 aaPredicted RBP12.87□□□□□ -0.35
LIMS2-217ENST00000545738 FAM240BA0A1B0GVZ2 78 aa12.87□□□□□ -0.35
LIMS2-217ENST00000545738 IGKV1-5P01602 117 aa12.87□□□□□ -0.35
LIMS2-217ENST00000545738 IL6RP08887 468 aaPredicted RBP12.87□□□□□ -0.35
LIMS2-217ENST00000545738 MYOD1P15172 320 aa12.87□□□□□ -0.35
LIMS2-217ENST00000545738 RAG2P55895 527 aa12.87□□□□□ -0.35
LIMS2-217ENST00000545738 UBE2KP61086 200 aa12.87□□□□□ -0.35
LIMS2-217ENST00000545738 TMEM187Q14656 261 aa12.87□□□□□ -0.35
LIMS2-217ENST00000545738 IZUMO4Q1ZYL8 232 aa12.87□□□□□ -0.35
LIMS2-217ENST00000545738 GALNT14Q96FL9 552 aa12.87□□□□□ -0.35
LIMS2-217ENST00000545738 SEC22AQ96IW7 307 aa12.87□□□□□ -0.35
LIMS2-217ENST00000545738 SCGB3A2Q96PL1 93 aa12.87□□□□□ -0.35
LIMS2-217ENST00000545738 TSNAXQ99598 290 aaKnown RBP12.87□□□□□ -0.35
LIMS2-217ENST00000545738 MDFIQ99750 246 aa12.87□□□□□ -0.35
LIMS2-217ENST00000545738 C19orf24Q9BVV8 132 aa12.87□□□□□ -0.35
LIMS2-217ENST00000545738 TMEM222Q9H0R3 208 aa12.87□□□□□ -0.35
LIMS2-217ENST00000545738 LINC00527Q9UJ94 153 aa12.87□□□□□ -0.35
LIMS2-217ENST00000545738 TRRAPQ9Y4A5 3859 aa12.86□□□□□ -0.35
LIMS2-217ENST00000545738 A0A0G2JRQ6 117 aa12.86□□□□□ -0.35
LIMS2-217ENST00000545738 MARCH11A6NNE9 402 aa12.86□□□□□ -0.35
LIMS2-217ENST00000545738 NDUFA7O95182 113 aa12.86□□□□□ -0.35
LIMS2-217ENST00000545738 SPDEFO95238 335 aa12.86□□□□□ -0.35
LIMS2-217ENST00000545738 CA2P00918 260 aa12.86□□□□□ -0.35
LIMS2-217ENST00000545738 KRASP01116 189 aa12.86□□□□□ -0.35
LIMS2-217ENST00000545738 HLA-DRB1P01911 266 aa12.86□□□□□ -0.35
LIMS2-217ENST00000545738 S100GP29377 79 aa12.86□□□□□ -0.35
LIMS2-217ENST00000545738 RIPPLY3P57055 190 aa12.86□□□□□ -0.35
LIMS2-217ENST00000545738 RAB25P57735 213 aa12.86□□□□□ -0.35
LIMS2-217ENST00000545738 TAS2R31P59538 309 aa12.86□□□□□ -0.35
LIMS2-217ENST00000545738 POU2AF1Q16633 256 aa12.86□□□□□ -0.35
LIMS2-217ENST00000545738 TMEM128Q5BJH2 165 aa12.86□□□□□ -0.35
LIMS2-217ENST00000545738 C9orf152Q5JTZ5 239 aa12.86□□□□□ -0.35
LIMS2-217ENST00000545738 OR4A47Q6IF82 309 aa12.86□□□□□ -0.35
LIMS2-217ENST00000545738 CD300LFQ8TDQ1 290 aa12.86□□□□□ -0.35
LIMS2-217ENST00000545738 R3HDM4Q96D70 268 aa12.86□□□□□ -0.35
LIMS2-217ENST00000545738 M0QZK8 103 aa12.85□□□□□ -0.35
LIMS2-217ENST00000545738 IGHG2P01859 326 aa12.85□□□□□ -0.35
LIMS2-217ENST00000545738 CRYBA1P05813 215 aa12.85□□□□□ -0.35
LIMS2-217ENST00000545738 NDUFA5Q16718 116 aa12.85□□□□□ -0.35
LIMS2-217ENST00000545738 ANKRD55Q3KP44 614 aa12.85□□□□□ -0.35
LIMS2-217ENST00000545738 C10orf55Q5SWW7 151 aa12.85□□□□□ -0.35
LIMS2-217ENST00000545738 LIN54Q6MZP7 749 aa12.85□□□□□ -0.35
LIMS2-217ENST00000545738 MZT2BQ6NZ67 158 aa12.85□□□□□ -0.35
LIMS2-217ENST00000545738 PPP1R27Q86WC6 154 aa12.85□□□□□ -0.35
LIMS2-217ENST00000545738 TCTEX1D1Q8N7M0 179 aa12.85□□□□□ -0.35
LIMS2-217ENST00000545738 DUSP18Q8NEJ0 188 aa12.85□□□□□ -0.35
LIMS2-217ENST00000545738 OR52B4Q8NGK2 314 aa12.85□□□□□ -0.35
LIMS2-217ENST00000545738 NOL4LQ96MY1 436 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms