RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 Q6ZT83 130 aa13.58□□□□□ -0.24
VARS2-212ENST00000542001 FAM122AQ96E09 287 aa13.58□□□□□ -0.24
VARS2-212ENST00000542001 FAM90A10PA6NDY2 464 aa13.57□□□□□ -0.24
VARS2-212ENST00000542001 FAM90A18PA6NE21 464 aa13.57□□□□□ -0.24
VARS2-212ENST00000542001 FAM90A16PA6NEW6 464 aa13.57□□□□□ -0.24
VARS2-212ENST00000542001 FAM90A20PA6NIJ5 464 aa13.57□□□□□ -0.24
VARS2-212ENST00000542001 FAM90A8PA6NJQ4 464 aa13.57□□□□□ -0.24
VARS2-212ENST00000542001 FAM90A7PA6NKC0 464 aa13.57□□□□□ -0.24
VARS2-212ENST00000542001 FAM90A22PA8MWA6 464 aa13.57□□□□□ -0.24
VARS2-212ENST00000542001 FAM90A12PA8MX19 464 aa13.57□□□□□ -0.24
VARS2-212ENST00000542001 FAM90A5PA8MXJ8 464 aa13.57□□□□□ -0.24
VARS2-212ENST00000542001 FAM90A23PA8MXZ1 464 aa13.57□□□□□ -0.24
VARS2-212ENST00000542001 PPIHO43447 177 aaKnown RBP13.57□□□□□ -0.24
VARS2-212ENST00000542001 FAM90A15PP0C7V4 464 aa13.57□□□□□ -0.24
VARS2-212ENST00000542001 FAM90A13PP0C7W8 464 aa13.57□□□□□ -0.24
VARS2-212ENST00000542001 FAM90A14PP0C7W9 464 aa13.57□□□□□ -0.24
VARS2-212ENST00000542001 FAM90A24PP0C7X0 464 aa13.57□□□□□ -0.24
VARS2-212ENST00000542001 OR10J1P30954 320 aa13.57□□□□□ -0.24
VARS2-212ENST00000542001 RANP62826 216 aaKnown RBP13.57□□□□□ -0.24
VARS2-212ENST00000542001 SERF2P84101 59 aa13.57□□□□□ -0.24
VARS2-212ENST00000542001 ATP6V1FQ16864 119 aa13.57□□□□□ -0.24
VARS2-212ENST00000542001 LINC00470Q9BZP3 86 aa13.57□□□□□ -0.24
VARS2-212ENST00000542001 CALYQ9NYX4 217 aa13.57□□□□□ -0.24
VARS2-212ENST00000542001 A0A087X0M5 115 aa13.57□□□□□ -0.24
VARS2-212ENST00000542001 A0A1B0GX30 115 aa13.57□□□□□ -0.24
VARS2-212ENST00000542001 GRIFINA4D1Z8 144 aa13.57□□□□□ -0.24
VARS2-212ENST00000542001 TGIF2LXQ8IUE1 241 aa13.57□□□□□ -0.24
VARS2-212ENST00000542001 DUXBA0A1W2PPF3 345 aa13.57□□□□□ -0.24
VARS2-212ENST00000542001 SLC25A5P05141 298 aaKnown RBP13.57□□□□□ -0.24
VARS2-212ENST00000542001 ADH4P08319 380 aa13.57□□□□□ -0.24
VARS2-212ENST00000542001 RNF224P0DH78 156 aa13.57□□□□□ -0.24
VARS2-212ENST00000542001 IL3RAP26951 378 aa13.57□□□□□ -0.24
VARS2-212ENST00000542001 HERPUD1Q15011 391 aa13.57□□□□□ -0.24
VARS2-212ENST00000542001 PRR31Q5SQ13 230 aa13.57□□□□□ -0.24
VARS2-212ENST00000542001 RPL11P62913 178 aaKnown RBP13.56□□□□□ -0.24
VARS2-212ENST00000542001 EML6Q6ZMW3 1958 aa13.56□□□□□ -0.24
VARS2-212ENST00000542001 CORO2AQ92828 525 aa13.56□□□□□ -0.24
VARS2-212ENST00000542001 WDR61Q9GZS3 305 aaKnown RBP13.56□□□□□ -0.24
VARS2-212ENST00000542001 RRHO14718 337 aa13.56□□□□□ -0.24
VARS2-212ENST00000542001 CSN3P07498 182 aa13.56□□□□□ -0.24
VARS2-212ENST00000542001 CD59P13987 128 aa13.56□□□□□ -0.24
VARS2-212ENST00000542001 SLC24A4Q8NFF2 622 aa13.56□□□□□ -0.24
VARS2-212ENST00000542001 Q8WTZ3 238 aa13.56□□□□□ -0.24
VARS2-212ENST00000542001 TMEM45BQ96B21 275 aa13.56□□□□□ -0.24
VARS2-212ENST00000542001 LPAR2Q9HBW0 351 aa13.56□□□□□ -0.24
VARS2-212ENST00000542001 TMEM210A6NLX4 147 aa13.56□□□□□ -0.24
VARS2-212ENST00000542001 ARL14EPLP0DKL9 152 aa13.56□□□□□ -0.24
VARS2-212ENST00000542001 TEPPQ6URK8 271 aa13.56□□□□□ -0.24
VARS2-212ENST00000542001 GTF3AQ92664 365 aaKnown RBP13.56□□□□□ -0.24
VARS2-212ENST00000542001 RPEQ96AT9 228 aa13.56□□□□□ -0.24
VARS2-212ENST00000542001 GSN-AS1Q9NRJ2 163 aa13.56□□□□□ -0.24
VARS2-212ENST00000542001 OR51B2Q9Y5P1 312 aa13.56□□□□□ -0.24
VARS2-212ENST00000542001 TRBV6-7A0A0A0MS04 114 aa13.55□□□□□ -0.24
VARS2-212ENST00000542001 SERTM2A0A1B0GWG4 89 aa13.55□□□□□ -0.24
VARS2-212ENST00000542001 COX5BP10606 129 aa13.55□□□□□ -0.24
VARS2-212ENST00000542001 RAB7AP51149 207 aa13.55□□□□□ -0.24
VARS2-212ENST00000542001 HSBP1O75506 76 aa13.55□□□□□ -0.24
VARS2-212ENST00000542001 AMTP48728 403 aa13.55□□□□□ -0.24
VARS2-212ENST00000542001 LYZP61626 148 aa13.55□□□□□ -0.24
VARS2-212ENST00000542001 MST1LQ2TV78 715 aa13.55□□□□□ -0.24
VARS2-212ENST00000542001 ZNF600Q6ZNG1 722 aa13.55□□□□□ -0.24
VARS2-212ENST00000542001 SLC25A10Q9UBX3 287 aaPredicted RBP13.55□□□□□ -0.24
VARS2-212ENST00000542001 TCF19Q9Y242 345 aa13.55□□□□□ -0.24
VARS2-212ENST00000542001 A0A1B0GV90 55 aa13.55□□□□□ -0.24
VARS2-212ENST00000542001 C16orf97H3BN30 126 aa13.55□□□□□ -0.24
VARS2-212ENST00000542001 NDUFS6O75380 124 aaKnown RBP13.55□□□□□ -0.24
VARS2-212ENST00000542001 GABRA6Q16445 453 aa13.55□□□□□ -0.24
VARS2-212ENST00000542001 GFI1BQ5VTD9 330 aa13.55□□□□□ -0.24
VARS2-212ENST00000542001 LHFPL4Q7Z7J7 247 aa13.55□□□□□ -0.24
VARS2-212ENST00000542001 LINC00596Q86U02 117 aa13.55□□□□□ -0.24
VARS2-212ENST00000542001 SAXO1Q8IYX7 474 aa13.55□□□□□ -0.24
VARS2-212ENST00000542001 C1QTNF9BB2RNN3 333 aa13.54□□□□□ -0.24
VARS2-212ENST00000542001 MPZP25189 248 aa13.54□□□□□ -0.24
VARS2-212ENST00000542001 RPL30P62888 115 aaKnown RBP13.54□□□□□ -0.24
VARS2-212ENST00000542001 ID3Q02535 119 aa13.54□□□□□ -0.24
VARS2-212ENST00000542001 ACP7Q6ZNF0 438 aa13.54□□□□□ -0.24
VARS2-212ENST00000542001 HIF1ANQ9NWT6 349 aa13.54□□□□□ -0.24
VARS2-212ENST00000542001 IGKV1-6A0A0C4DH72 117 aa13.54□□□□□ -0.24
VARS2-212ENST00000542001 CXorf65A6NEN9 183 aa13.54□□□□□ -0.24
VARS2-212ENST00000542001 SNURFLB1AK76 121 aa13.54□□□□□ -0.24
VARS2-212ENST00000542001 CLN5O75503 358 aa13.54□□□□□ -0.24
VARS2-212ENST00000542001 TMEM50AO95807 157 aa13.54□□□□□ -0.24
VARS2-212ENST00000542001 HPRT1P00492 218 aa13.54□□□□□ -0.24
VARS2-212ENST00000542001 ATP5G3P48201 142 aa13.54□□□□□ -0.24
VARS2-212ENST00000542001 CNN1P51911 297 aaKnown RBP13.54□□□□□ -0.24
VARS2-212ENST00000542001 ERVFRD-1P60508 538 aa13.54□□□□□ -0.24
VARS2-212ENST00000542001 TGIF2LYQ8IUE0 185 aa13.54□□□□□ -0.24
VARS2-212ENST00000542001 OR4D5Q8NGN0 318 aa13.54□□□□□ -0.24
VARS2-212ENST00000542001 PAM16Q9Y3D7 125 aa13.54□□□□□ -0.24
VARS2-212ENST00000542001 IGHV3-35A0A0C4DH35 117 aa13.54□□□□□ -0.24
VARS2-212ENST00000542001 K7N7A8 449 aa13.54□□□□□ -0.24
VARS2-212ENST00000542001 CRISP2P16562 243 aa13.54□□□□□ -0.24
VARS2-212ENST00000542001 PEAR1Q5VY43 1037 aaPredicted RBP13.54□□□□□ -0.24
VARS2-212ENST00000542001 ZNF525Q8N782 197 aa13.54□□□□□ -0.24
VARS2-212ENST00000542001 OR4X1Q8NH49 305 aa13.54□□□□□ -0.24
VARS2-212ENST00000542001 TMEM56Q96MV1 263 aa13.54□□□□□ -0.24
VARS2-212ENST00000542001 TMEM56-RWDD3S4R434 201 aa13.54□□□□□ -0.24
VARS2-212ENST00000542001 VMA21Q3ZAQ7 101 aa13.54□□□□□ -0.24
VARS2-212ENST00000542001 OR1L4Q8NGR5 311 aa13.54□□□□□ -0.24
VARS2-212ENST00000542001 FLYWCH2Q96CP2 140 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms