RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 C9orf106Q8NAJ2 232 aa7.9□□□□□ -1.15
CNOT4-212ENST00000541284 RFESDQ8TAC1 157 aa7.9□□□□□ -1.15
CNOT4-212ENST00000541284 MSL2Q9HCI7 577 aa7.9□□□□□ -1.15
CNOT4-212ENST00000541284 OBP2BQ9NPH6 170 aa7.9□□□□□ -1.15
CNOT4-212ENST00000541284 FZR1Q9UM11 496 aa7.9□□□□□ -1.15
CNOT4-212ENST00000541284 PSG11Q9UQ72 335 aa7.9□□□□□ -1.15
CNOT4-212ENST00000541284 TRAV3A0A0B4J244 114 aa7.89□□□□□ -1.15
CNOT4-212ENST00000541284 H7BYZ3 331 aa7.89□□□□□ -1.15
CNOT4-212ENST00000541284 TMPRSS3P57727 454 aa7.89□□□□□ -1.15
CNOT4-212ENST00000541284 UBE2NP61088 152 aaKnown RBP7.89□□□□□ -1.15
CNOT4-212ENST00000541284 PKIAP61925 76 aa7.89□□□□□ -1.15
CNOT4-212ENST00000541284 SRSF6Q13247 344 aaKnown RBP7.89□□□□□ -1.15
CNOT4-212ENST00000541284 CLEC12BQ2HXU8 276 aa7.89□□□□□ -1.15
CNOT4-212ENST00000541284 DHRS13Q6UX07 377 aa7.89□□□□□ -1.15
CNOT4-212ENST00000541284 DDB2Q92466 427 aa7.89□□□□□ -1.15
CNOT4-212ENST00000541284 FER1L6-AS2Q96M78 137 aa7.89□□□□□ -1.15
CNOT4-212ENST00000541284 HSD17B10Q99714 261 aaKnown RBP7.89□□□□□ -1.15
CNOT4-212ENST00000541284 MGST2Q99735 147 aa7.89□□□□□ -1.15
CNOT4-212ENST00000541284 RBFOX2O43251 390 aaKnown RBP eCLIP7.89□□□□□ -1.15
CNOT4-212ENST00000541284 MRPL49Q13405 166 aaKnown RBP7.89□□□□□ -1.15
CNOT4-212ENST00000541284 TREML4Q6UXN2 200 aa7.89□□□□□ -1.15
CNOT4-212ENST00000541284 H2BFWTQ7Z2G1 175 aa7.89□□□□□ -1.15
CNOT4-212ENST00000541284 REC114Q7Z4M0 266 aa7.89□□□□□ -1.15
CNOT4-212ENST00000541284 R3HDM4Q96D70 268 aa7.89□□□□□ -1.15
CNOT4-212ENST00000541284 ANAPC16Q96DE5 110 aa7.89□□□□□ -1.15
CNOT4-212ENST00000541284 CIB3Q96Q77 187 aaPredicted RBP7.89□□□□□ -1.15
CNOT4-212ENST00000541284 PRO1933Q9H354 126 aa7.89□□□□□ -1.15
CNOT4-212ENST00000541284 C11orf94C9JXX5 98 aa7.89□□□□□ -1.15
CNOT4-212ENST00000541284 CRYAAP02489 173 aa7.89□□□□□ -1.15
CNOT4-212ENST00000541284 CGB3P0DN86 165 aa7.89□□□□□ -1.15
CNOT4-212ENST00000541284 CGB7P0DN87 165 aa7.89□□□□□ -1.15
CNOT4-212ENST00000541284 IL3RAP26951 378 aa7.89□□□□□ -1.15
CNOT4-212ENST00000541284 DDTP30046 118 aa7.89□□□□□ -1.15
CNOT4-212ENST00000541284 SRP14P37108 136 aaKnown RBP7.89□□□□□ -1.15
CNOT4-212ENST00000541284 CDC34P49427 236 aaPredicted RBP7.89□□□□□ -1.15
CNOT4-212ENST00000541284 FAM3BP58499 235 aaPredicted RBP7.89□□□□□ -1.15
CNOT4-212ENST00000541284 RELBQ01201 579 aa7.89□□□□□ -1.15
CNOT4-212ENST00000541284 MBNL2Q5VZF2 373 aaKnown RBP7.89□□□□□ -1.15
CNOT4-212ENST00000541284 IFI27L2Q9H2X8 130 aa7.89□□□□□ -1.15
CNOT4-212ENST00000541284 LSM4Q9Y4Z0 139 aaKnown RBP7.89□□□□□ -1.15
CNOT4-212ENST00000541284 IGHV1-18A0A0C4DH31 117 aa7.88□□□□□ -1.15
CNOT4-212ENST00000541284 SMCO3A2RU48 225 aa7.88□□□□□ -1.15
CNOT4-212ENST00000541284 PGPEP1LA6NFU8 196 aa7.88□□□□□ -1.15
CNOT4-212ENST00000541284 FAM90A9PA6NNJ1 464 aa7.88□□□□□ -1.15
CNOT4-212ENST00000541284 GFRA3O60609 400 aa7.88□□□□□ -1.15
CNOT4-212ENST00000541284 C1QTNF9P0C862 333 aa7.88□□□□□ -1.15
CNOT4-212ENST00000541284 BMP5P22003 454 aa7.88□□□□□ -1.15
CNOT4-212ENST00000541284 SSX2Q16385 188 aa7.88□□□□□ -1.15
CNOT4-212ENST00000541284 MORN2Q502X0 79 aa7.88□□□□□ -1.15
CNOT4-212ENST00000541284 HES3Q5TGS1 186 aa7.88□□□□□ -1.15
CNOT4-212ENST00000541284 ZNF664Q8N3J9 261 aa7.88□□□□□ -1.15
CNOT4-212ENST00000541284 XKRY2A2RUG3 117 aa7.88□□□□□ -1.15
CNOT4-212ENST00000541284 CGAP01215 116 aa7.88□□□□□ -1.15
CNOT4-212ENST00000541284 CD1BP29016 333 aa7.88□□□□□ -1.15
CNOT4-212ENST00000541284 TMEM164Q5U3C3 297 aa7.88□□□□□ -1.15
CNOT4-212ENST00000541284 ACY3Q96HD9 319 aa7.88□□□□□ -1.15
CNOT4-212ENST00000541284 GGTLC1Q9BX51 225 aa7.88□□□□□ -1.15
CNOT4-212ENST00000541284 IGHV2OR16-5A0A0B4J2B6 119 aa7.87□□□□□ -1.15
CNOT4-212ENST00000541284 SLC31A2O15432 143 aa7.87□□□□□ -1.15
CNOT4-212ENST00000541284 WT1P19544 449 aaPredicted RBP7.87□□□□□ -1.15
CNOT4-212ENST00000541284 ARG2P78540 354 aa7.87□□□□□ -1.15
CNOT4-212ENST00000541284 TGFBR3Q03167 851 aa7.87□□□□□ -1.15
CNOT4-212ENST00000541284 ZNF718Q3SXZ3 478 aa7.87□□□□□ -1.15
CNOT4-212ENST00000541284 VKORC1L1Q8N0U8 176 aa7.87□□□□□ -1.15
CNOT4-212ENST00000541284 C1orf162Q8NEQ5 155 aaPredicted RBP7.87□□□□□ -1.15
CNOT4-212ENST00000541284 OR2T10Q8NGZ9 312 aa7.87□□□□□ -1.15
CNOT4-212ENST00000541284 TRIB1Q96RU8 372 aa7.87□□□□□ -1.15
CNOT4-212ENST00000541284 FUT9Q9Y231 359 aa7.87□□□□□ -1.15
CNOT4-212ENST00000541284 CACNA1DQ01668 2161 aa7.87□□□□□ -1.15
CNOT4-212ENST00000541284 RAI1Q7Z5J4 1906 aaPredicted RBP7.87□□□□□ -1.15
CNOT4-212ENST00000541284 A0A1W2PPQ1 181 aa7.87□□□□□ -1.15
CNOT4-212ENST00000541284 A8MWP6 167 aa7.87□□□□□ -1.15
CNOT4-212ENST00000541284 NUPR1O60356 82 aa7.87□□□□□ -1.15
CNOT4-212ENST00000541284 CD99P14209 185 aa7.87□□□□□ -1.15
CNOT4-212ENST00000541284 DEFA6Q01524 100 aa7.87□□□□□ -1.15
CNOT4-212ENST00000541284 RPL39P5Q59GN2 51 aa7.87□□□□□ -1.15
CNOT4-212ENST00000541284 FIP1L1Q6UN15 594 aaKnown RBP7.87□□□□□ -1.15
CNOT4-212ENST00000541284 OR52E5Q8NH55 327 aa7.87□□□□□ -1.15
CNOT4-212ENST00000541284 MS4A5Q9H3V2 200 aa7.87□□□□□ -1.15
CNOT4-212ENST00000541284 AURKAIP1Q9NWT8 199 aaPredicted RBP7.87□□□□□ -1.15
CNOT4-212ENST00000541284 DKK4Q9UBT3 224 aa7.87□□□□□ -1.15
CNOT4-212ENST00000541284 WASF3Q9UPY6 502 aa7.87□□□□□ -1.15
CNOT4-212ENST00000541284 DSCAMO60469 2012 aa7.87□□□□□ -1.15
CNOT4-212ENST00000541284 A0A1B0GUS0 222 aa7.87□□□□□ -1.15
CNOT4-212ENST00000541284 SRRM5B3KS81 715 aa7.87□□□□□ -1.15
CNOT4-212ENST00000541284 F2RL2O00254 374 aa7.87□□□□□ -1.15
CNOT4-212ENST00000541284 TNFSF13O75888 250 aa7.87□□□□□ -1.15
CNOT4-212ENST00000541284 STAG3L2P0CL84 134 aa7.87□□□□□ -1.15
CNOT4-212ENST00000541284 STAG3L3P0CL85 134 aa7.87□□□□□ -1.15
CNOT4-212ENST00000541284 PRDX2P32119 198 aa7.87□□□□□ -1.15
CNOT4-212ENST00000541284 OPRK1P41145 380 aa7.87□□□□□ -1.15
CNOT4-212ENST00000541284 LINC00310P59036 64 aa7.87□□□□□ -1.15
CNOT4-212ENST00000541284 ACOT6Q3I5F7 207 aaPredicted RBP7.87□□□□□ -1.15
CNOT4-212ENST00000541284 LRP11Q86VZ4 500 aa7.87□□□□□ -1.15
CNOT4-212ENST00000541284 DMRTC2Q8IXT2 367 aaPredicted RBP7.87□□□□□ -1.15
CNOT4-212ENST00000541284 CISD2Q8N5K1 135 aaKnown RBP7.87□□□□□ -1.15
CNOT4-212ENST00000541284 PRSS33Q8NF86 280 aa7.87□□□□□ -1.15
CNOT4-212ENST00000541284 KCNIP2Q9NS61 270 aa7.87□□□□□ -1.15
CNOT4-212ENST00000541284 TP53TG3Q9ULZ0 132 aa7.87□□□□□ -1.15
CNOT4-212ENST00000541284 NCOR1O75376 2440 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms