RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 EGR2P11161 476 aaPredicted RBP8.04□□□□□ -1.12
CDCA3-208ENST00000540683 MXD1Q05195 221 aa8.04□□□□□ -1.12
CDCA3-208ENST00000540683 NEDD8Q15843 81 aa8.04□□□□□ -1.12
CDCA3-208ENST00000540683 TNXAQ16473 311 aa8.04□□□□□ -1.12
CDCA3-208ENST00000540683 PRSS8Q16651 343 aa8.04□□□□□ -1.12
CDCA3-208ENST00000540683 ACSM6Q6P461 480 aa8.04□□□□□ -1.12
CDCA3-208ENST00000540683 BEST4Q8NFU0 473 aa8.04□□□□□ -1.12
CDCA3-208ENST00000540683 OR4A5Q8NH83 315 aa8.04□□□□□ -1.12
CDCA3-208ENST00000540683 LGALS14Q8TCE9 139 aa8.04□□□□□ -1.12
CDCA3-208ENST00000540683 ACOT12Q8WYK0 555 aa8.04□□□□□ -1.12
CDCA3-208ENST00000540683 MAFIPQ8WZ33 124 aa8.04□□□□□ -1.12
CDCA3-208ENST00000540683 DDB2Q92466 427 aa8.04□□□□□ -1.12
CDCA3-208ENST00000540683 WWC2-AS2Q96NR7 200 aa8.04□□□□□ -1.12
CDCA3-208ENST00000540683 MS4A10Q96PG2 267 aa8.04□□□□□ -1.12
CDCA3-208ENST00000540683 FAM103A1Q9BTL3 118 aaKnown RBP8.04□□□□□ -1.12
CDCA3-208ENST00000540683 TINAGL1Q9GZM7 467 aaPredicted RBP8.04□□□□□ -1.12
CDCA3-208ENST00000540683 IFT46Q9NQC8 304 aa8.04□□□□□ -1.12
CDCA3-208ENST00000540683 COA4Q9NYJ1 87 aa8.04□□□□□ -1.12
CDCA3-208ENST00000540683 PEMTQ9UBM1 199 aa8.04□□□□□ -1.12
CDCA3-208ENST00000540683 SCOCQ9UIL1 159 aa8.04□□□□□ -1.12
CDCA3-208ENST00000540683 RBMX2Q9Y388 322 aaKnown RBP8.04□□□□□ -1.12
CDCA3-208ENST00000540683 TRAV18A0A075B6X5 111 aa8.03□□□□□ -1.12
CDCA3-208ENST00000540683 SMIM31A0A1B0GVY4 71 aa8.03□□□□□ -1.12
CDCA3-208ENST00000540683 SHISA3A0PJX4 238 aa8.03□□□□□ -1.12
CDCA3-208ENST00000540683 RBFOX2O43251 390 aaKnown RBP eCLIP8.03□□□□□ -1.12
CDCA3-208ENST00000540683 SOX15O60248 233 aa8.03□□□□□ -1.12
CDCA3-208ENST00000540683 OR2A4O95047 310 aa8.03□□□□□ -1.12
CDCA3-208ENST00000540683 IGLV2-23P01705 113 aa8.03□□□□□ -1.12
CDCA3-208ENST00000540683 CRYGBP07316 175 aa8.03□□□□□ -1.12
CDCA3-208ENST00000540683 SNRPBP14678 240 aaKnown RBP8.03□□□□□ -1.12
CDCA3-208ENST00000540683 HIST1H1BP16401 226 aaKnown RBP8.03□□□□□ -1.12
CDCA3-208ENST00000540683 TAS2R46P59540 309 aa8.03□□□□□ -1.12
CDCA3-208ENST00000540683 OR5T1Q8NG75 326 aa8.03□□□□□ -1.12
CDCA3-208ENST00000540683 TCTEX1D2Q8WW35 142 aa8.03□□□□□ -1.12
CDCA3-208ENST00000540683 SRSF12Q8WXF0 261 aaKnown RBP8.03□□□□□ -1.12
CDCA3-208ENST00000540683 DLX4Q92988 240 aaPredicted RBP8.03□□□□□ -1.12
CDCA3-208ENST00000540683 OR2A7Q96R45 310 aa8.03□□□□□ -1.12
CDCA3-208ENST00000540683 OR51E2Q9H255 320 aa8.03□□□□□ -1.12
CDCA3-208ENST00000540683 PEF1Q9UBV8 284 aaKnown RBP8.03□□□□□ -1.12
CDCA3-208ENST00000540683 ZNF257Q9Y2Q1 563 aa8.03□□□□□ -1.12
CDCA3-208ENST00000540683 FBXO7Q9Y3I1 522 aa8.03□□□□□ -1.12
CDCA3-208ENST00000540683 LSM4Q9Y4Z0 139 aaKnown RBP8.03□□□□□ -1.12
CDCA3-208ENST00000540683 SORL1Q92673 2214 aa8.03□□□□□ -1.12
CDCA3-208ENST00000540683 IGHV4OR15-8A0A075B7B6 117 aa8.02□□□□□ -1.13
CDCA3-208ENST00000540683 A0A087WW49 117 aa8.02□□□□□ -1.13
CDCA3-208ENST00000540683 MSGN1A6NI15 193 aa8.02□□□□□ -1.13
CDCA3-208ENST00000540683 IGHV3-11P01762 117 aa8.02□□□□□ -1.13
CDCA3-208ENST00000540683 NFYAP23511 347 aaPredicted RBP8.02□□□□□ -1.13
CDCA3-208ENST00000540683 HERV-K104P61576 105 aa8.02□□□□□ -1.13
CDCA3-208ENST00000540683 ATP5G2Q06055 141 aa8.02□□□□□ -1.13
CDCA3-208ENST00000540683 PLA2G7Q13093 441 aa8.02□□□□□ -1.13
CDCA3-208ENST00000540683 RPEL1Q2QD12 228 aa8.02□□□□□ -1.13
CDCA3-208ENST00000540683 UBE2NLQ5JXB2 153 aa8.02□□□□□ -1.13
CDCA3-208ENST00000540683 THOC7Q6I9Y2 204 aaKnown RBP8.02□□□□□ -1.13
CDCA3-208ENST00000540683 LCN12Q6JVE5 192 aa8.02□□□□□ -1.13
CDCA3-208ENST00000540683 HSD17B13Q7Z5P4 300 aaPredicted RBP8.02□□□□□ -1.13
CDCA3-208ENST00000540683 NR2C2APQ86WQ0 139 aa8.02□□□□□ -1.13
CDCA3-208ENST00000540683 HOGA1Q86XE5 327 aa8.02□□□□□ -1.13
CDCA3-208ENST00000540683 CMTM1Q8IZ96 169 aa8.02□□□□□ -1.13
CDCA3-208ENST00000540683 NECAP1Q8NC96 275 aa8.02□□□□□ -1.13
CDCA3-208ENST00000540683 TSPAN14Q8NG11 270 aa8.02□□□□□ -1.13
CDCA3-208ENST00000540683 OR2K2Q8NGT1 345 aa8.02□□□□□ -1.13
CDCA3-208ENST00000540683 NUDCD2Q8WVJ2 157 aa8.02□□□□□ -1.13
CDCA3-208ENST00000540683 CMTM3Q96MX0 182 aa8.02□□□□□ -1.13
CDCA3-208ENST00000540683 ZMAT4Q9H898 229 aa8.02□□□□□ -1.13
CDCA3-208ENST00000540683 SIGLEC8Q9NYZ4 499 aa8.02□□□□□ -1.13
CDCA3-208ENST00000540683 THYN1Q9P016 225 aa8.02□□□□□ -1.13
CDCA3-208ENST00000540683 U3KQK5 164 aa8.02□□□□□ -1.13
CDCA3-208ENST00000540683 SMIM30A4D0T7 59 aa8.01□□□□□ -1.13
CDCA3-208ENST00000540683 XRCC3O43542 346 aa8.01□□□□□ -1.13
CDCA3-208ENST00000540683 KBTBD11O94819 623 aa8.01□□□□□ -1.13
CDCA3-208ENST00000540683 GP9P14770 177 aa8.01□□□□□ -1.13
CDCA3-208ENST00000540683 FCGR2CP31995 323 aa8.01□□□□□ -1.13
CDCA3-208ENST00000540683 SLURP1P55000 103 aa8.01□□□□□ -1.13
CDCA3-208ENST00000540683 TMEM69Q5SWH9 247 aa8.01□□□□□ -1.13
CDCA3-208ENST00000540683 LPCAT3Q6P1A2 487 aa8.01□□□□□ -1.13
CDCA3-208ENST00000540683 ZNF343Q6P1L6 599 aa8.01□□□□□ -1.13
CDCA3-208ENST00000540683 GTSCR1Q86UQ5 136 aa8.01□□□□□ -1.13
CDCA3-208ENST00000540683 SGPP2Q8IWX5 399 aa8.01□□□□□ -1.13
CDCA3-208ENST00000540683 MFSD4AQ8N468 514 aa8.01□□□□□ -1.13
CDCA3-208ENST00000540683 TTC9CQ8N5M4 171 aa8.01□□□□□ -1.13
CDCA3-208ENST00000540683 OR5AP2Q8NGF4 316 aa8.01□□□□□ -1.13
CDCA3-208ENST00000540683 OR13F1Q8NGS4 319 aa8.01□□□□□ -1.13
CDCA3-208ENST00000540683 GIMAP1Q8WWP7 306 aa8.01□□□□□ -1.13
CDCA3-208ENST00000540683 PRR25Q96S07 402 aa8.01□□□□□ -1.13
CDCA3-208ENST00000540683 SRSF8Q9BRL6 282 aaKnown RBP8.01□□□□□ -1.13
CDCA3-208ENST00000540683 AUNIPQ9H7T9 357 aa8.01□□□□□ -1.13
CDCA3-208ENST00000540683 ZNF430Q9H8G1 570 aaPredicted RBP8.01□□□□□ -1.13
CDCA3-208ENST00000540683 TPSG1Q9NRR2 321 aa8.01□□□□□ -1.13
CDCA3-208ENST00000540683 DNAH3Q8TD57 4116 aa8□□□□□ -1.13
CDCA3-208ENST00000540683 LINC00473A8K010 186 aa8□□□□□ -1.13
CDCA3-208ENST00000540683 NPIPB5A8MRT5 1133 aa8□□□□□ -1.13
CDCA3-208ENST00000540683 HPRT1P00492 218 aa8□□□□□ -1.13
CDCA3-208ENST00000540683 SAA1P0DJI8 122 aaPredicted RBP8□□□□□ -1.13
CDCA3-208ENST00000540683 TAS2R31P59538 309 aa8□□□□□ -1.13
CDCA3-208ENST00000540683 ERVK-16P61578 105 aa8□□□□□ -1.13
CDCA3-208ENST00000540683 KLF5Q13887 457 aaPredicted RBP8□□□□□ -1.13
CDCA3-208ENST00000540683 ASPHD1Q5U4P2 390 aa8□□□□□ -1.13
CDCA3-208ENST00000540683 Q8N402 240 aa8□□□□□ -1.13
CDCA3-208ENST00000540683 ADAD2Q8NCV1 583 aaKnown RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms