RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 HSD17B10Q99714 261 aaKnown RBP11.6□□□□□ -0.55
USB1-203ENST00000539737 DCUN1D5Q9BTE7 237 aa11.6□□□□□ -0.55
USB1-203ENST00000539737 GNB4Q9HAV0 340 aa11.6□□□□□ -0.55
USB1-203ENST00000539737 NDUFA13Q9P0J0 144 aa11.6□□□□□ -0.55
USB1-203ENST00000539737 PRELID3BQ9Y3B1 194 aa11.6□□□□□ -0.55
USB1-203ENST00000539737 A3GALT2U3KPV4 340 aa11.6□□□□□ -0.55
USB1-203ENST00000539737 RRHO14718 337 aa11.59□□□□□ -0.55
USB1-203ENST00000539737 TBPP20226 339 aa11.59□□□□□ -0.55
USB1-203ENST00000539737 CDX1P47902 265 aaPredicted RBP11.59□□□□□ -0.55
USB1-203ENST00000539737 FXYD4P59646 89 aa11.59□□□□□ -0.55
USB1-203ENST00000539737 RPS16P62249 146 aaKnown RBP11.59□□□□□ -0.55
USB1-203ENST00000539737 SSBP1Q04837 148 aaKnown RBP11.59□□□□□ -0.55
USB1-203ENST00000539737 IL18Q14116 193 aa11.59□□□□□ -0.55
USB1-203ENST00000539737 RNASE12Q5GAN4 147 aaKnown RBP11.59□□□□□ -0.55
USB1-203ENST00000539737 HAPLN4Q86UW8 402 aa11.59□□□□□ -0.55
USB1-203ENST00000539737 OR52I2Q8NH67 350 aa11.59□□□□□ -0.55
USB1-203ENST00000539737 FCAMRQ8WWV6 532 aa11.59□□□□□ -0.55
USB1-203ENST00000539737 DDB2Q92466 427 aa11.59□□□□□ -0.55
USB1-203ENST00000539737 RITA1Q96K30 269 aa11.59□□□□□ -0.55
USB1-203ENST00000539737 HARBI1Q96MB7 349 aa11.59□□□□□ -0.55
USB1-203ENST00000539737 ABHD1Q96SE0 405 aa11.59□□□□□ -0.55
USB1-203ENST00000539737 ZNF2Q9BSG1 426 aaPredicted RBP11.59□□□□□ -0.55
USB1-203ENST00000539737 KRTAP17-1Q9BYP8 105 aa11.59□□□□□ -0.55
USB1-203ENST00000539737 SLC5A7Q9GZV3 580 aa11.59□□□□□ -0.55
USB1-203ENST00000539737 KLK15Q9H2R5 256 aa11.59□□□□□ -0.55
USB1-203ENST00000539737 ZNF580Q9UK33 172 aa11.59□□□□□ -0.55
USB1-203ENST00000539737 LINC00473A8K010 186 aa11.58□□□□□ -0.56
USB1-203ENST00000539737 GABARAPH6UMI1 98 aa11.58□□□□□ -0.56
USB1-203ENST00000539737 CTDSPLO15194 276 aa11.58□□□□□ -0.56
USB1-203ENST00000539737 IGLV2-14P01704 120 aa11.58□□□□□ -0.56
USB1-203ENST00000539737 IGHG4P01861 327 aa11.58□□□□□ -0.56
USB1-203ENST00000539737 IGF1P05019 195 aa11.58□□□□□ -0.56
USB1-203ENST00000539737 LYL1P12980 280 aa11.58□□□□□ -0.56
USB1-203ENST00000539737 LGALS7P47929 136 aa11.58□□□□□ -0.56
USB1-203ENST00000539737 RFX2P48378 723 aa11.58□□□□□ -0.56
USB1-203ENST00000539737 LINC00205P59089 165 aa11.58□□□□□ -0.56
USB1-203ENST00000539737 GNB1P62873 340 aa11.58□□□□□ -0.56
USB1-203ENST00000539737 PSG5Q15238 335 aa11.58□□□□□ -0.56
USB1-203ENST00000539737 TMEM177Q53S58 311 aa11.58□□□□□ -0.56
USB1-203ENST00000539737 ZNF660Q6AZW8 331 aaPredicted RBP11.58□□□□□ -0.56
USB1-203ENST00000539737 LIN54Q6MZP7 749 aa11.58□□□□□ -0.56
USB1-203ENST00000539737 DHRS11Q6UWP2 260 aa11.58□□□□□ -0.56
USB1-203ENST00000539737 ZNF66Q6ZN08 573 aa11.58□□□□□ -0.56
USB1-203ENST00000539737 TMEM17Q86X19 198 aa11.58□□□□□ -0.56
USB1-203ENST00000539737 LYSMD2Q8IV50 215 aa11.58□□□□□ -0.56
USB1-203ENST00000539737 BVESQ8NE79 360 aa11.58□□□□□ -0.56
USB1-203ENST00000539737 OR11H1Q8NG94 326 aa11.58□□□□□ -0.56
USB1-203ENST00000539737 OR6F1Q8NGZ6 308 aa11.58□□□□□ -0.56
USB1-203ENST00000539737 MOB3AQ96BX8 217 aa11.58□□□□□ -0.56
USB1-203ENST00000539737 ALX4Q9H161 411 aaPredicted RBP11.58□□□□□ -0.56
USB1-203ENST00000539737 FBXL15Q9H469 300 aa11.58□□□□□ -0.56
USB1-203ENST00000539737 PARP11Q9NR21 331 aa11.58□□□□□ -0.56
USB1-203ENST00000539737 METTL1Q9UBP6 276 aaKnown RBP11.58□□□□□ -0.56
USB1-203ENST00000539737 MTFP1Q9UDX5 166 aa11.58□□□□□ -0.56
USB1-203ENST00000539737 SHOXO15266 292 aa11.57□□□□□ -0.56
USB1-203ENST00000539737 CRYZL1O95825 349 aa11.57□□□□□ -0.56
USB1-203ENST00000539737 FRMD6-AS1P0C7T7 363 aa11.57□□□□□ -0.56
USB1-203ENST00000539737 S100A5P33763 92 aa11.57□□□□□ -0.56
USB1-203ENST00000539737 KIR2DS2P43631 304 aa11.57□□□□□ -0.56
USB1-203ENST00000539737 TSPAN5P62079 268 aa11.57□□□□□ -0.56
USB1-203ENST00000539737 CFHR3Q02985 330 aa11.57□□□□□ -0.56
USB1-203ENST00000539737 CATR1Q13166 79 aa11.57□□□□□ -0.56
USB1-203ENST00000539737 EIF4EBP1Q13541 118 aaPredicted RBP11.57□□□□□ -0.56
USB1-203ENST00000539737 RNASE10Q5GAN6 216 aaKnown RBP11.57□□□□□ -0.56
USB1-203ENST00000539737 OR4S2Q8NH73 311 aa11.57□□□□□ -0.56
USB1-203ENST00000539737 OSR1Q8TAX0 266 aaPredicted RBP11.57□□□□□ -0.56
USB1-203ENST00000539737 ABHD5Q8WTS1 349 aa11.57□□□□□ -0.56
USB1-203ENST00000539737 CASTOR1Q8WTX7 329 aa11.57□□□□□ -0.56
USB1-203ENST00000539737 SMIM4Q8WVI0 70 aa11.57□□□□□ -0.56
USB1-203ENST00000539737 C4orf3Q8WVX3 66 aa11.57□□□□□ -0.56
USB1-203ENST00000539737 TCTEX1D2Q8WW35 142 aa11.57□□□□□ -0.56
USB1-203ENST00000539737 OR51J1Q9H342 316 aa11.57□□□□□ -0.56
USB1-203ENST00000539737 PALMDQ9NP74 551 aa11.57□□□□□ -0.56
USB1-203ENST00000539737 CCL28Q9NRJ3 127 aa11.57□□□□□ -0.56
USB1-203ENST00000539737 TAS2R8Q9NYW2 309 aa11.57□□□□□ -0.56
USB1-203ENST00000539737 KLK11Q9UBX7 282 aa11.57□□□□□ -0.56
USB1-203ENST00000539737 SMAD5-AS1Q9Y6J3 95 aa11.57□□□□□ -0.56
USB1-203ENST00000539737 IGHV7-81A0A0B4J1V7 117 aa11.56□□□□□ -0.56
USB1-203ENST00000539737 SLC25A17O43808 307 aa11.56□□□□□ -0.56
USB1-203ENST00000539737 FCGR3BO75015 233 aa11.56□□□□□ -0.56
USB1-203ENST00000539737 SPNP16150 400 aa11.56□□□□□ -0.56
USB1-203ENST00000539737 CD40LGP29965 261 aa11.56□□□□□ -0.56
USB1-203ENST00000539737 TAS2R19P59542 299 aa11.56□□□□□ -0.56
USB1-203ENST00000539737 TMEM267Q0VDI3 215 aaPredicted RBP11.56□□□□□ -0.56
USB1-203ENST00000539737 FHL3Q13643 280 aa11.56□□□□□ -0.56
USB1-203ENST00000539737 VMA21Q3ZAQ7 101 aa11.56□□□□□ -0.56
USB1-203ENST00000539737 RNF152Q8N8N0 203 aa11.56□□□□□ -0.56
USB1-203ENST00000539737 DGCR14Q96DF8 476 aaKnown RBP11.56□□□□□ -0.56
USB1-203ENST00000539737 FXYD6Q9H0Q3 95 aa11.56□□□□□ -0.56
USB1-203ENST00000539737 WSB1Q9Y6I7 421 aa11.56□□□□□ -0.56
USB1-203ENST00000539737 TRAV41A0A0B4J266 112 aa11.55□□□□□ -0.56
USB1-203ENST00000539737 FABP12A6NFH5 140 aa11.55□□□□□ -0.56
USB1-203ENST00000539737 G3V318 75 aa11.55□□□□□ -0.56
USB1-203ENST00000539737 IFNA6P05013 189 aa11.55□□□□□ -0.56
USB1-203ENST00000539737 TNFSF8P32971 234 aa11.55□□□□□ -0.56
USB1-203ENST00000539737 RPL30P62888 115 aaKnown RBP11.55□□□□□ -0.56
USB1-203ENST00000539737 LPCAT3Q6P1A2 487 aa11.55□□□□□ -0.56
USB1-203ENST00000539737 ZNF818PQ6ZRF7 136 aa11.55□□□□□ -0.56
USB1-203ENST00000539737 CMTM1Q8IZ96 169 aa11.55□□□□□ -0.56
USB1-203ENST00000539737 MFSD4AQ8N468 514 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms