RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 SLC38A11Q08AI6 406 aa14.35□□□□□ -0.11
SNX17-210ENST00000537606 SSX7Q7RTT5 188 aa14.35□□□□□ -0.11
SNX17-210ENST00000537606 DTD1Q8TEA8 209 aa14.35□□□□□ -0.11
SNX17-210ENST00000537606 ZNF251Q9BRH9 671 aa14.35□□□□□ -0.11
SNX17-210ENST00000537606 LAMP3Q9UQV4 416 aa14.35□□□□□ -0.11
SNX17-210ENST00000537606 CEBPZOSA8MTT3 80 aa14.34□□□□□ -0.11
SNX17-210ENST00000537606 HBG1P69891 147 aa14.34□□□□□ -0.11
SNX17-210ENST00000537606 HBG2P69892 147 aa14.34□□□□□ -0.11
SNX17-210ENST00000537606 FBXL19-AS1Q494R0 122 aa14.34□□□□□ -0.11
SNX17-210ENST00000537606 TMEM200BQ69YZ2 307 aa14.34□□□□□ -0.11
SNX17-210ENST00000537606 SP5Q6BEB4 398 aaPredicted RBP14.34□□□□□ -0.11
SNX17-210ENST00000537606 TMEM14EPQ6UXP3 125 aa14.34□□□□□ -0.11
SNX17-210ENST00000537606 UNQ6494/PRO21346Q6UXR6 183 aa14.34□□□□□ -0.11
SNX17-210ENST00000537606 ZNF439Q8NDP4 499 aa14.34□□□□□ -0.11
SNX17-210ENST00000537606 RXFP4Q8TDU9 374 aa14.34□□□□□ -0.11
SNX17-210ENST00000537606 CORO2AQ92828 525 aa14.34□□□□□ -0.11
SNX17-210ENST00000537606 CTSZQ9UBR2 303 aa14.34□□□□□ -0.11
SNX17-210ENST00000537606 PRELID3BQ9Y3B1 194 aa14.34□□□□□ -0.11
SNX17-210ENST00000537606 IGHV1-69-2A0A0G2JMI3 117 aa14.34□□□□□ -0.11
SNX17-210ENST00000537606 B9A039 149 aa14.34□□□□□ -0.11
SNX17-210ENST00000537606 FGF8P55075 233 aaPredicted RBP14.34□□□□□ -0.11
SNX17-210ENST00000537606 ELLP55199 621 aaPredicted RBP14.34□□□□□ -0.11
SNX17-210ENST00000537606 LRRC75BQ2VPJ9 315 aa14.34□□□□□ -0.11
SNX17-210ENST00000537606 LCN15Q6UWW0 184 aa14.34□□□□□ -0.11
SNX17-210ENST00000537606 MUC15Q8N387 334 aa14.34□□□□□ -0.11
SNX17-210ENST00000537606 RAB9BQ9NP90 201 aa14.34□□□□□ -0.11
SNX17-210ENST00000537606 RPUSD1Q9UJJ7 312 aaKnown RBP14.34□□□□□ -0.11
SNX17-210ENST00000537606 LINC00312Q9Y6C7 94 aa14.34□□□□□ -0.11
SNX17-210ENST00000537606 HIVEP3Q5T1R4 2406 aa14.34□□□□□ -0.11
SNX17-210ENST00000537606 C7orf77A4D0Y5 90 aa14.33□□□□□ -0.12
SNX17-210ENST00000537606 H7C2Y5 167 aa14.33□□□□□ -0.12
SNX17-210ENST00000537606 IFNA17P01571 189 aa14.33□□□□□ -0.12
SNX17-210ENST00000537606 ZNF726P1Q15940 193 aa14.33□□□□□ -0.12
SNX17-210ENST00000537606 ZNF383Q8NA42 475 aa14.33□□□□□ -0.12
SNX17-210ENST00000537606 DDB2Q92466 427 aa14.33□□□□□ -0.12
SNX17-210ENST00000537606 ISOC2Q96AB3 205 aa14.33□□□□□ -0.12
SNX17-210ENST00000537606 WDR61Q9GZS3 305 aaKnown RBP14.33□□□□□ -0.12
SNX17-210ENST00000537606 HRNRQ86YZ3 2850 aaPredicted RBP14.33□□□□□ -0.12
SNX17-210ENST00000537606 DVL1O14640 695 aa14.33□□□□□ -0.12
SNX17-210ENST00000537606 TLE4Q04727 773 aa14.33□□□□□ -0.12
SNX17-210ENST00000537606 KIAA1456Q9P272 454 aa14.33□□□□□ -0.12
SNX17-210ENST00000537606 PUS1Q9Y606 427 aaKnown RBP eCLIP14.33□□□□□ -0.12
SNX17-210ENST00000537606 NDUFB3O43676 98 aa14.32□□□□□ -0.12
SNX17-210ENST00000537606 EFNB3Q15768 340 aa14.32□□□□□ -0.12
SNX17-210ENST00000537606 TNFRSF13BO14836 293 aaPredicted RBP14.32□□□□□ -0.12
SNX17-210ENST00000537606 PPIHO43447 177 aaKnown RBP14.32□□□□□ -0.12
SNX17-210ENST00000537606 COL8A2P25067 703 aa14.32□□□□□ -0.12
SNX17-210ENST00000537606 ICAM4Q14773 271 aa14.32□□□□□ -0.12
SNX17-210ENST00000537606 SOHLH1Q5JUK2 328 aa14.32□□□□□ -0.12
SNX17-210ENST00000537606 OR4A16Q8NH70 328 aa14.32□□□□□ -0.12
SNX17-210ENST00000537606 LINC00574Q9H8X3 128 aa14.32□□□□□ -0.12
SNX17-210ENST00000537606 RALYQ9UKM9 306 aaKnown RBP14.32□□□□□ -0.12
SNX17-210ENST00000537606 PKD1L2Q7Z442 2459 aa14.31□□□□□ -0.12
SNX17-210ENST00000537606 A0A1B0GW64 132 aa14.31□□□□□ -0.12
SNX17-210ENST00000537606 COLCA2A8K830 154 aa14.31□□□□□ -0.12
SNX17-210ENST00000537606 ITGB1BP1O14713 200 aa14.31□□□□□ -0.12
SNX17-210ENST00000537606 CRYBA1P05813 215 aa14.31□□□□□ -0.12
SNX17-210ENST00000537606 LRRC10Q5BKY1 277 aa14.31□□□□□ -0.12
SNX17-210ENST00000537606 CLDND2Q8NHS1 167 aa14.31□□□□□ -0.12
SNX17-210ENST00000537606 TAF15Q92804 592 aaKnown RBP eCLIP14.31□□□□□ -0.12
SNX17-210ENST00000537606 ZNF714Q96N38 554 aa14.31□□□□□ -0.12
SNX17-210ENST00000537606 PRORYQ9H606 182 aa14.31□□□□□ -0.12
SNX17-210ENST00000537606 TMEM140Q9NV12 185 aa14.31□□□□□ -0.12
SNX17-210ENST00000537606 GNG13Q9P2W3 67 aa14.31□□□□□ -0.12
SNX17-210ENST00000537606 SCAF4O95104 1147 aaKnown RBP14.31□□□□□ -0.12
SNX17-210ENST00000537606 NQO2P16083 231 aa14.31□□□□□ -0.12
SNX17-210ENST00000537606 ERVK-16P61578 105 aa14.31□□□□□ -0.12
SNX17-210ENST00000537606 FAM122CQ6P4D5 195 aa14.31□□□□□ -0.12
SNX17-210ENST00000537606 SLC25A48Q6ZT89 311 aaKnown RBP14.31□□□□□ -0.12
SNX17-210ENST00000537606 GAL3ST2Q9H3Q3 398 aa14.31□□□□□ -0.12
SNX17-210ENST00000537606 SMCO4Q9NRQ5 59 aa14.31□□□□□ -0.12
SNX17-210ENST00000537606 MLXQ9UH92 298 aa14.31□□□□□ -0.12
SNX17-210ENST00000537606 PMS2P5A8MQ11 134 aa14.3□□□□□ -0.12
SNX17-210ENST00000537606 LY6HO94772 140 aa14.3□□□□□ -0.12
SNX17-210ENST00000537606 SRP19P09132 144 aaKnown RBP14.3□□□□□ -0.12
SNX17-210ENST00000537606 TET2Q6N021 2002 aaPredicted RBP14.3□□□□□ -0.12
SNX17-210ENST00000537606 ZFP82Q8N141 532 aa14.3□□□□□ -0.12
SNX17-210ENST00000537606 CYB561D1Q8N8Q1 229 aa14.3□□□□□ -0.12
SNX17-210ENST00000537606 RCC1LQ96I51 464 aaKnown RBP14.3□□□□□ -0.12
SNX17-210ENST00000537606 GAB2Q9UQC2 676 aa14.3□□□□□ -0.12
SNX17-210ENST00000537606 BTBD17A6NE02 478 aa14.3□□□□□ -0.12
SNX17-210ENST00000537606 HMGB3O15347 200 aaKnown RBP14.3□□□□□ -0.12
SNX17-210ENST00000537606 RBFOX2O43251 390 aaKnown RBP eCLIP14.3□□□□□ -0.127e-7■■■□□ 17
SNX17-210ENST00000537606 IGKV1D-33P01593 117 aa14.3□□□□□ -0.12
SNX17-210ENST00000537606 IGKV1-33P01594 117 aa14.3□□□□□ -0.12
SNX17-210ENST00000537606 ARG1P05089 322 aa14.3□□□□□ -0.12
SNX17-210ENST00000537606 ZNF672Q499Z4 452 aaPredicted RBP14.3□□□□□ -0.12
SNX17-210ENST00000537606 OR4S2Q8NH73 311 aa14.3□□□□□ -0.12
SNX17-210ENST00000537606 RHOVQ96L33 236 aa14.3□□□□□ -0.12
SNX17-210ENST00000537606 ZFP92A6NM28 416 aa14.29□□□□□ -0.12
SNX17-210ENST00000537606 IGKV1-16P04430 117 aa14.29□□□□□ -0.12
SNX17-210ENST00000537606 CT45A6P0DMU7 189 aa14.29□□□□□ -0.12
SNX17-210ENST00000537606 CT45A5P0DMU8 189 aa14.29□□□□□ -0.12
SNX17-210ENST00000537606 CT45A7P0DMV0 189 aa14.29□□□□□ -0.12
SNX17-210ENST00000537606 REG1BP48304 166 aa14.29□□□□□ -0.12
SNX17-210ENST00000537606 RAB2AP61019 212 aa14.29□□□□□ -0.12
SNX17-210ENST00000537606 RELBQ01201 579 aa14.29□□□□□ -0.12
SNX17-210ENST00000537606 MEF2CQ06413 473 aaPredicted RBP14.29□□□□□ -0.12
SNX17-210ENST00000537606 FAM216AQ8WUB2 273 aa14.29□□□□□ -0.12
SNX17-210ENST00000537606 A0A1W2PPE2 198 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms