RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 TEX45Q8NA69 505 aa9.42□□□□□ -0.9
SSBP3-214ENST00000533209 MRGPRFQ96AM1 343 aa9.42□□□□□ -0.9
SSBP3-214ENST00000533209 CITED2Q99967 270 aaPredicted RBP9.42□□□□□ -0.9
SSBP3-214ENST00000533209 SRRQ9GZT4 340 aa9.42□□□□□ -0.9
SSBP3-214ENST00000533209 PARP11Q9NR21 331 aa9.42□□□□□ -0.9
SSBP3-214ENST00000533209 PKD1L1Q8TDX9 2849 aa9.41□□□□□ -0.9
SSBP3-214ENST00000533209 ADARB2-AS1A8MUL3 147 aa9.41□□□□□ -0.9
SSBP3-214ENST00000533209 DISC1C4P0D8 188 aa9.41□□□□□ -0.9
SSBP3-214ENST00000533209 ARPC1BO15143 372 aaKnown RBP9.41□□□□□ -0.9
SSBP3-214ENST00000533209 PGAM2P15259 253 aa9.41□□□□□ -0.9
SSBP3-214ENST00000533209 PPP5CP53041 499 aa9.41□□□□□ -0.9
SSBP3-214ENST00000533209 SLC35B1P78383 322 aa9.41□□□□□ -0.9
SSBP3-214ENST00000533209 KLF9Q13886 244 aaPredicted RBP9.41□□□□□ -0.9
SSBP3-214ENST00000533209 SCGB2B2Q4G0G5 96 aa9.41□□□□□ -0.9
SSBP3-214ENST00000533209 C19orf54Q5BKX5 351 aa9.41□□□□□ -0.9
SSBP3-214ENST00000533209 IDO2Q6ZQW0 420 aa9.41□□□□□ -0.9
SSBP3-214ENST00000533209 VKORC1L1Q8N0U8 176 aa9.41□□□□□ -0.9
SSBP3-214ENST00000533209 PUSL1Q8N0Z8 303 aaKnown RBP9.41□□□□□ -0.9
SSBP3-214ENST00000533209 COMMD1Q8N668 190 aa9.41□□□□□ -0.9
SSBP3-214ENST00000533209 OR4X2Q8NGF9 303 aa9.41□□□□□ -0.9
SSBP3-214ENST00000533209 SGMS2Q8NHU3 365 aa9.41□□□□□ -0.9
SSBP3-214ENST00000533209 CD300LFQ8TDQ1 290 aa9.41□□□□□ -0.9
SSBP3-214ENST00000533209 BATF3Q9NR55 127 aa9.41□□□□□ -0.9
SSBP3-214ENST00000533209 WSB1Q9Y6I7 421 aa9.41□□□□□ -0.9
SSBP3-214ENST00000533209 G3V318 75 aa9.4□□□□□ -0.9
SSBP3-214ENST00000533209 S1PR2O95136 353 aa9.4□□□□□ -0.9
SSBP3-214ENST00000533209 HRASP01112 189 aa9.4□□□□□ -0.9
SSBP3-214ENST00000533209 PI3P19957 117 aa9.4□□□□□ -0.9
SSBP3-214ENST00000533209 VDAC1P21796 283 aa9.4□□□□□ -0.9
SSBP3-214ENST00000533209 F2RP25116 425 aa9.4□□□□□ -0.9
SSBP3-214ENST00000533209 PPIFP30405 207 aaKnown RBP9.4□□□□□ -0.9
SSBP3-214ENST00000533209 RND3P61587 244 aa9.4□□□□□ -0.9
SSBP3-214ENST00000533209 FXYD3Q14802 87 aa9.4□□□□□ -0.9
SSBP3-214ENST00000533209 PRSS8Q16651 343 aa9.4□□□□□ -0.9
SSBP3-214ENST00000533209 ZNF585BQ52M93 769 aa9.4□□□□□ -0.9
SSBP3-214ENST00000533209 TBC1D26Q86UD7 250 aa9.4□□□□□ -0.9
SSBP3-214ENST00000533209 NDUFA11Q86Y39 141 aa9.4□□□□□ -0.9
SSBP3-214ENST00000533209 POC5Q8NA72 575 aa9.4□□□□□ -0.9
SSBP3-214ENST00000533209 MINDY2Q8NBR6 621 aa9.4□□□□□ -0.9
SSBP3-214ENST00000533209 OR51S1Q8NGJ8 323 aa9.4□□□□□ -0.9
SSBP3-214ENST00000533209 OR13C8Q8NGS7 320 aa9.4□□□□□ -0.9
SSBP3-214ENST00000533209 MARCH1Q8TCQ1 289 aa9.4□□□□□ -0.9
SSBP3-214ENST00000533209 ARPC1AQ92747 370 aa9.4□□□□□ -0.9
SSBP3-214ENST00000533209 ZNF486Q96H40 463 aaPredicted RBP9.4□□□□□ -0.9
SSBP3-214ENST00000533209 RHOVQ96L33 236 aa9.4□□□□□ -0.9
SSBP3-214ENST00000533209 SDHCQ99643 169 aaPredicted RBP9.4□□□□□ -0.9
SSBP3-214ENST00000533209 FAM103A1Q9BTL3 118 aaKnown RBP9.4□□□□□ -0.9
SSBP3-214ENST00000533209 GON7Q9BXV9 100 aa9.4□□□□□ -0.9
SSBP3-214ENST00000533209 PLEKHA2Q9HB19 425 aa9.4□□□□□ -0.9
SSBP3-214ENST00000533209 SLC2A9Q9NRM0 540 aa9.4□□□□□ -0.9
SSBP3-214ENST00000533209 NUBP2Q9Y5Y2 271 aa9.4□□□□□ -0.9
SSBP3-214ENST00000533209 PLXNB1O43157 2135 aa9.4□□□□□ -0.91
SSBP3-214ENST00000533209 TRAV41A0A0B4J266 112 aa9.39□□□□□ -0.91
SSBP3-214ENST00000533209 TCRBV4S1A1TA0A5B7 111 aa9.39□□□□□ -0.91
SSBP3-214ENST00000533209 M0QZ24 198 aa9.39□□□□□ -0.91
SSBP3-214ENST00000533209 HPRT1P00492 218 aa9.39□□□□□ -0.91
SSBP3-214ENST00000533209 IGHG4P01861 327 aa9.39□□□□□ -0.91
SSBP3-214ENST00000533209 S100GP29377 79 aa9.39□□□□□ -0.91
SSBP3-214ENST00000533209 LPAR6P43657 344 aa9.39□□□□□ -0.91
SSBP3-214ENST00000533209 TAS2R31P59538 309 aa9.39□□□□□ -0.91
SSBP3-214ENST00000533209 AP3S2P59780 193 aa9.39□□□□□ -0.91
SSBP3-214ENST00000533209 GNB1P62873 340 aa9.39□□□□□ -0.91
SSBP3-214ENST00000533209 BAK1Q16611 211 aa9.39□□□□□ -0.91
SSBP3-214ENST00000533209 POU2AF1Q16633 256 aa9.39□□□□□ -0.91
SSBP3-214ENST00000533209 NSUN5P1Q3KNT7 163 aa9.39□□□□□ -0.91
SSBP3-214ENST00000533209 PRR31Q5SQ13 230 aa9.39□□□□□ -0.91
SSBP3-214ENST00000533209 TEX38Q6PEX7 206 aa9.39□□□□□ -0.91
SSBP3-214ENST00000533209 SSX9Q7RTT3 188 aa9.39□□□□□ -0.91
SSBP3-214ENST00000533209 TOMM5Q8N4H5 51 aa9.39□□□□□ -0.91
SSBP3-214ENST00000533209 TCTEX1D1Q8N7M0 179 aa9.39□□□□□ -0.91
SSBP3-214ENST00000533209 RNF152Q8N8N0 203 aa9.39□□□□□ -0.91
SSBP3-214ENST00000533209 GDPD1Q8N9F7 314 aa9.39□□□□□ -0.91
SSBP3-214ENST00000533209 ZFAND1Q8TCF1 268 aa9.39□□□□□ -0.91
SSBP3-214ENST00000533209 PRRT1Q99946 306 aa9.39□□□□□ -0.91
SSBP3-214ENST00000533209 ZNF430Q9H8G1 570 aaPredicted RBP9.39□□□□□ -0.91
SSBP3-214ENST00000533209 HRASLSQ9HDD0 168 aa9.39□□□□□ -0.91
SSBP3-214ENST00000533209 SLC2A8Q9NY64 477 aa9.39□□□□□ -0.91
SSBP3-214ENST00000533209 MGAM2Q2M2H8 2515 aa9.38□□□□□ -0.91
SSBP3-214ENST00000533209 TRRAPQ9Y4A5 3859 aa9.38□□□□□ -0.91
SSBP3-214ENST00000533209 A0A1W2PRX2 142 aa9.38□□□□□ -0.91
SSBP3-214ENST00000533209 MPPED1O15442 326 aa9.38□□□□□ -0.91
SSBP3-214ENST00000533209 SOX15O60248 233 aa9.38□□□□□ -0.91
SSBP3-214ENST00000533209 KBTBD11O94819 623 aa9.38□□□□□ -0.91
SSBP3-214ENST00000533209 OR2A4O95047 310 aa9.38□□□□□ -0.91
SSBP3-214ENST00000533209 CNIH1O95406 144 aa9.38□□□□□ -0.91
SSBP3-214ENST00000533209 TSPAN15O95858 294 aa9.38□□□□□ -0.91
SSBP3-214ENST00000533209 IGLV1-40P01703 118 aa9.38□□□□□ -0.91
SSBP3-214ENST00000533209 OPN1MWP04001 364 aa9.38□□□□□ -0.91
SSBP3-214ENST00000533209 CTSDP07339 412 aaPredicted RBP9.38□□□□□ -0.91
SSBP3-214ENST00000533209 ELANEP08246 267 aa9.38□□□□□ -0.91
SSBP3-214ENST00000533209 IL6RP08887 468 aaPredicted RBP9.38□□□□□ -0.91
SSBP3-214ENST00000533209 OPN1MW2P0DN77 364 aa9.38□□□□□ -0.91
SSBP3-214ENST00000533209 OPN1MW3P0DN78 364 aa9.38□□□□□ -0.91
SSBP3-214ENST00000533209 NQO2P16083 231 aa9.38□□□□□ -0.91
SSBP3-214ENST00000533209 PIGPP57054 158 aa9.38□□□□□ -0.91
SSBP3-214ENST00000533209 ZNF45Q02386 682 aa9.38□□□□□ -0.91
SSBP3-214ENST00000533209 FOXE3Q13461 319 aa9.38□□□□□ -0.91
SSBP3-214ENST00000533209 SURF2Q15527 256 aaPredicted RBP9.38□□□□□ -0.91
SSBP3-214ENST00000533209 TNXAQ16473 311 aa9.38□□□□□ -0.91
SSBP3-214ENST00000533209 ECSCRQ19T08 205 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms