RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 HS3ST2Q9Y278 367 aa3.97□□□□□ -1.77
PCF11-202ENST00000528336 SLC25A15Q9Y619 301 aa3.97□□□□□ -1.77
PCF11-202ENST00000528336 KIAA1549LQ6ZVL6 1849 aa3.96□□□□□ -1.78
PCF11-202ENST00000528336 hCG_1818297A0A087WSY0 165 aa3.96□□□□□ -1.78
PCF11-202ENST00000528336 UPK2O00526 184 aa3.96□□□□□ -1.78
PCF11-202ENST00000528336 IGHV3-48P01763 117 aa3.96□□□□□ -1.78
PCF11-202ENST00000528336 ATP5G1P05496 136 aa3.96□□□□□ -1.78
PCF11-202ENST00000528336 GPX2P18283 190 aa3.96□□□□□ -1.78
PCF11-202ENST00000528336 CXCL12P48061 93 aa3.96□□□□□ -1.78
PCF11-202ENST00000528336 RIPPLY3P57055 190 aa3.96□□□□□ -1.78
PCF11-202ENST00000528336 RAB2AP61019 212 aa3.96□□□□□ -1.78
PCF11-202ENST00000528336 EBPQ15125 230 aaKnown RBP3.96□□□□□ -1.78
PCF11-202ENST00000528336 TMEM128Q5BJH2 165 aa3.96□□□□□ -1.78
PCF11-202ENST00000528336 NCBP2-AS2Q69YL0 99 aa3.96□□□□□ -1.78
PCF11-202ENST00000528336 LCN12Q6JVE5 192 aa3.96□□□□□ -1.78
PCF11-202ENST00000528336 ZFP1Q6P2D0 407 aa3.96□□□□□ -1.78
PCF11-202ENST00000528336 TBPL2Q6SJ96 375 aa3.96□□□□□ -1.78
PCF11-202ENST00000528336 TMEM205Q6UW68 189 aa3.96□□□□□ -1.78
PCF11-202ENST00000528336 SLC16A13Q7RTY0 426 aa3.96□□□□□ -1.78
PCF11-202ENST00000528336 EIF4E3Q8N5X7 224 aaKnown RBP3.96□□□□□ -1.78
PCF11-202ENST00000528336 LINC00337Q8N6G1 96 aa3.96□□□□□ -1.78
PCF11-202ENST00000528336 OR8J3Q8NGG0 315 aa3.96□□□□□ -1.78
PCF11-202ENST00000528336 OR52L1Q8NGH7 329 aa3.96□□□□□ -1.78
PCF11-202ENST00000528336 OR2G3Q8NGZ4 309 aa3.96□□□□□ -1.78
PCF11-202ENST00000528336 GEMIN6Q8WXD5 167 aaKnown RBP3.96□□□□□ -1.78
PCF11-202ENST00000528336 ACY3Q96HD9 319 aa3.96□□□□□ -1.78
PCF11-202ENST00000528336 DIRAS2Q96HU8 199 aa3.96□□□□□ -1.78
PCF11-202ENST00000528336 LINC00477Q96M19 166 aa3.96□□□□□ -1.78
PCF11-202ENST00000528336 SPACA5Q96QH8 159 aa3.96□□□□□ -1.78
PCF11-202ENST00000528336 EBPLQ9BY08 206 aa3.96□□□□□ -1.78
PCF11-202ENST00000528336 PTGES2Q9H7Z7 377 aa3.96□□□□□ -1.78
PCF11-202ENST00000528336 RBFOX1Q9NWB1 397 aaKnown RBP3.96□□□□□ -1.78
PCF11-202ENST00000528336 TAS2R1Q9NYW7 299 aa3.96□□□□□ -1.78
PCF11-202ENST00000528336 BTRCQ9Y297 605 aa3.96□□□□□ -1.78
PCF11-202ENST00000528336 MUC6Q6W4X9 2439 aa3.96□□□□□ -1.78
PCF11-202ENST00000528336 MYOFQ9NZM1 2061 aa3.95□□□□□ -1.78
PCF11-202ENST00000528336 KMT2EQ8IZD2 1858 aa3.95□□□□□ -1.78
PCF11-202ENST00000528336 A0A0G2JN53 185 aa3.95□□□□□ -1.78
PCF11-202ENST00000528336 PGPA6NDG6 321 aa3.95□□□□□ -1.78
PCF11-202ENST00000528336 K7EP13 123 aa3.95□□□□□ -1.78
PCF11-202ENST00000528336 APOC4-APOC2K7ER74 178 aa3.95□□□□□ -1.78
PCF11-202ENST00000528336 FFAR1O14842 300 aa3.95□□□□□ -1.78
PCF11-202ENST00000528336 PDE6DO43924 150 aa3.95□□□□□ -1.78
PCF11-202ENST00000528336 MFSD11O43934 449 aa3.95□□□□□ -1.78
PCF11-202ENST00000528336 ARL6IP5O75915 188 aa3.95□□□□□ -1.78
PCF11-202ENST00000528336 OR2A4O95047 310 aa3.95□□□□□ -1.78
PCF11-202ENST00000528336 CRYZL1O95825 349 aa3.95□□□□□ -1.78
PCF11-202ENST00000528336 APOC2P02655 101 aa3.95□□□□□ -1.78
PCF11-202ENST00000528336 C1QBP02746 253 aa3.95□□□□□ -1.78
PCF11-202ENST00000528336 TDGF1P13385 188 aa3.95□□□□□ -1.78
PCF11-202ENST00000528336 RAB3AP20336 220 aa3.95□□□□□ -1.78
PCF11-202ENST00000528336 PSMB2P49721 201 aa3.95□□□□□ -1.78
PCF11-202ENST00000528336 P2RX1P51575 399 aa3.95□□□□□ -1.78
PCF11-202ENST00000528336 SLC18A1P54219 525 aa3.95□□□□□ -1.78
PCF11-202ENST00000528336 DYNLT1P63172 113 aa3.95□□□□□ -1.78
PCF11-202ENST00000528336 EGFEM1PQ0D2K5 195 aa3.95□□□□□ -1.78
PCF11-202ENST00000528336 C1DQ13901 141 aaKnown RBP3.95□□□□□ -1.78
PCF11-202ENST00000528336 HERPUD1Q15011 391 aa3.95□□□□□ -1.78
PCF11-202ENST00000528336 C9orf64Q5T6V5 341 aa3.95□□□□□ -1.78
PCF11-202ENST00000528336 N4BP2L1Q5TBK1 243 aaPredicted RBP3.95□□□□□ -1.78
PCF11-202ENST00000528336 RPL13AP3Q6NVV1 102 aa3.95□□□□□ -1.78
PCF11-202ENST00000528336 LPCAT3Q6P1A2 487 aa3.95□□□□□ -1.78
PCF11-202ENST00000528336 C22orf39Q6P5X5 142 aa3.95□□□□□ -1.78
PCF11-202ENST00000528336 RFLNAQ6ZTI6 216 aa3.95□□□□□ -1.78
PCF11-202ENST00000528336 TMEM179BQ7Z7N9 219 aa3.95□□□□□ -1.78
PCF11-202ENST00000528336 SLC35F6Q8N357 371 aa3.95□□□□□ -1.78
PCF11-202ENST00000528336 GPR26Q8NDV2 337 aa3.95□□□□□ -1.78
PCF11-202ENST00000528336 TSTD1Q8NFU3 115 aa3.95□□□□□ -1.78
PCF11-202ENST00000528336 OR51A2Q8NGJ7 313 aa3.95□□□□□ -1.78
PCF11-202ENST00000528336 OR4S2Q8NH73 311 aa3.95□□□□□ -1.78
PCF11-202ENST00000528336 LINC00167Q96N53 147 aa3.95□□□□□ -1.78
PCF11-202ENST00000528336 OLFM3Q96PB7 478 aa3.95□□□□□ -1.78
PCF11-202ENST00000528336 OR2A7Q96R45 310 aa3.95□□□□□ -1.78
PCF11-202ENST00000528336 TBX5Q99593 518 aa3.95□□□□□ -1.78
PCF11-202ENST00000528336 SFXN3Q9BWM7 321 aa3.95□□□□□ -1.78
PCF11-202ENST00000528336 TPT1P8Q9HAU6 139 aa3.95□□□□□ -1.78
PCF11-202ENST00000528336 RASL12Q9NYN1 266 aa3.95□□□□□ -1.78
PCF11-202ENST00000528336 PCYOX1Q9UHG3 505 aa3.95□□□□□ -1.78
PCF11-202ENST00000528336 JPT1Q9UK76 154 aa3.95□□□□□ -1.78
PCF11-202ENST00000528336 HEY1Q9Y5J3 304 aa3.95□□□□□ -1.78
PCF11-202ENST00000528336 WSB1Q9Y6I7 421 aa3.95□□□□□ -1.78
PCF11-202ENST00000528336 MUC22E2RYF6 1773 aaPredicted RBP3.94□□□□□ -1.78
PCF11-202ENST00000528336 IGHV1-69DA0A0B4J2H0 117 aa3.94□□□□□ -1.78
PCF11-202ENST00000528336 SERPINB7O75635 380 aa3.94□□□□□ -1.78
PCF11-202ENST00000528336 MMP23AO75900 390 aa3.94□□□□□ -1.78
PCF11-202ENST00000528336 IGLV3-19P01714 112 aa3.94□□□□□ -1.78
PCF11-202ENST00000528336 HLA-EP13747 358 aa3.94□□□□□ -1.78
PCF11-202ENST00000528336 NELFEP18615 380 aaKnown RBP3.94□□□□□ -1.78
PCF11-202ENST00000528336 HSPA9P38646 679 aaKnown RBP3.94□□□□□ -1.78
PCF11-202ENST00000528336 CCR6P51684 374 aa3.94□□□□□ -1.78
PCF11-202ENST00000528336 SYNJ2BPP57105 145 aa3.94□□□□□ -1.78
PCF11-202ENST00000528336 TAS2R19P59542 299 aa3.94□□□□□ -1.78
PCF11-202ENST00000528336 GNG11P61952 73 aa3.94□□□□□ -1.78
PCF11-202ENST00000528336 HPCAP84074 193 aa3.94□□□□□ -1.78
PCF11-202ENST00000528336 SURF2Q15527 256 aaPredicted RBP3.94□□□□□ -1.78
PCF11-202ENST00000528336 CST6Q15828 149 aa3.94□□□□□ -1.78
PCF11-202ENST00000528336 BATFQ16520 125 aa3.94□□□□□ -1.78
PCF11-202ENST00000528336 FBXL19-AS1Q494R0 122 aa3.94□□□□□ -1.78
PCF11-202ENST00000528336 FBXW9Q5XUX1 488 aa3.94□□□□□ -1.78
PCF11-202ENST00000528336 FBXW12Q6X9E4 464 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms