RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 SCAND1P57086 179 aa7.99□□□□□ -1.13
PRPF40B-204ENST00000527253 ZNF45Q02386 682 aa7.99□□□□□ -1.13
PRPF40B-204ENST00000527253 CBX3Q13185 183 aa7.99□□□□□ -1.13
PRPF40B-204ENST00000527253 DCTN2Q13561 401 aaKnown RBP7.99□□□□□ -1.13
PRPF40B-204ENST00000527253 KLF5Q13887 457 aaPredicted RBP7.99□□□□□ -1.13
PRPF40B-204ENST00000527253 TNXAQ16473 311 aa7.99□□□□□ -1.13
PRPF40B-204ENST00000527253 OVCH2Q7RTZ1 564 aa7.99□□□□□ -1.13
PRPF40B-204ENST00000527253 VKORC1L1Q8N0U8 176 aa7.99□□□□□ -1.13
PRPF40B-204ENST00000527253 MFSD4AQ8N468 514 aa7.99□□□□□ -1.13
PRPF40B-204ENST00000527253 BEST4Q8NFU0 473 aa7.99□□□□□ -1.13
PRPF40B-204ENST00000527253 SRSF12Q8WXF0 261 aaKnown RBP7.99□□□□□ -1.13
PRPF40B-204ENST00000527253 TMEM68Q96MH6 324 aa7.99□□□□□ -1.13
PRPF40B-204ENST00000527253 RANGRFQ9HD47 186 aaPredicted RBP7.99□□□□□ -1.13
PRPF40B-204ENST00000527253 CCL28Q9NRJ3 127 aa7.99□□□□□ -1.13
PRPF40B-204ENST00000527253 COA4Q9NYJ1 87 aa7.99□□□□□ -1.13
PRPF40B-204ENST00000527253 ETV7Q9Y603 341 aa7.99□□□□□ -1.13
PRPF40B-204ENST00000527253 KMT2CQ8NEZ4 4911 aaKnown RBP7.99□□□□□ -1.13
PRPF40B-204ENST00000527253 TRIM64CA6NLI5 447 aa7.98□□□□□ -1.13
PRPF40B-204ENST00000527253 E7EUB6 86 aa7.98□□□□□ -1.13
PRPF40B-204ENST00000527253 OR9G9P0C7N8 305 aa7.98□□□□□ -1.13
PRPF40B-204ENST00000527253 NHLRC4P0CG21 123 aaPredicted RBP7.98□□□□□ -1.13
PRPF40B-204ENST00000527253 GP9P14770 177 aa7.98□□□□□ -1.13
PRPF40B-204ENST00000527253 AADACP22760 399 aa7.98□□□□□ -1.13
PRPF40B-204ENST00000527253 FCGR2CP31995 323 aa7.98□□□□□ -1.13
PRPF40B-204ENST00000527253 CDK10Q15131 360 aa7.98□□□□□ -1.13
PRPF40B-204ENST00000527253 ZNF343Q6P1L6 599 aa7.98□□□□□ -1.13
PRPF40B-204ENST00000527253 C19orf35Q6ZS72 473 aa7.98□□□□□ -1.13
PRPF40B-204ENST00000527253 KCTD9Q7L273 389 aa7.98□□□□□ -1.13
PRPF40B-204ENST00000527253 PUSL1Q8N0Z8 303 aaKnown RBP7.98□□□□□ -1.13
PRPF40B-204ENST00000527253 SNAPC3Q92966 411 aa7.98□□□□□ -1.13
PRPF40B-204ENST00000527253 PHB2Q99623 299 aa7.98□□□□□ -1.13
PRPF40B-204ENST00000527253 DCUN1D5Q9BTE7 237 aa7.98□□□□□ -1.13
PRPF40B-204ENST00000527253 TAS2R8Q9NYW2 309 aa7.98□□□□□ -1.13
PRPF40B-204ENST00000527253 SPATA2Q9UM82 520 aa7.98□□□□□ -1.13
PRPF40B-204ENST00000527253 TRBV9A0A0B4J1U6 114 aa7.97□□□□□ -1.13
PRPF40B-204ENST00000527253 A0A0G2JLM5 398 aa7.97□□□□□ -1.13
PRPF40B-204ENST00000527253 MEIS3P1A6NDR6 274 aa7.97□□□□□ -1.13
PRPF40B-204ENST00000527253 HMX3A6NHT5 357 aa7.97□□□□□ -1.13
PRPF40B-204ENST00000527253 TEX22C9J3V5 150 aa7.97□□□□□ -1.13
PRPF40B-204ENST00000527253 TNFSF12O43508 249 aa7.97□□□□□ -1.13
PRPF40B-204ENST00000527253 SLC22A5O76082 557 aa7.97□□□□□ -1.13
PRPF40B-204ENST00000527253 IGLV1-51P01701 117 aa7.97□□□□□ -1.13
PRPF40B-204ENST00000527253 IL6RP08887 468 aaPredicted RBP7.97□□□□□ -1.13
PRPF40B-204ENST00000527253 MYOD1P15172 320 aa7.97□□□□□ -1.13
PRPF40B-204ENST00000527253 LSM3P62310 102 aaKnown RBP7.97□□□□□ -1.13
PRPF40B-204ENST00000527253 SBSPONQ8IVN8 264 aa7.97□□□□□ -1.13
PRPF40B-204ENST00000527253 Q8N1Y9 231 aa7.97□□□□□ -1.13
PRPF40B-204ENST00000527253 TTC9CQ8N5M4 171 aa7.97□□□□□ -1.13
PRPF40B-204ENST00000527253 TCTEX1D2Q8WW35 142 aa7.97□□□□□ -1.13
PRPF40B-204ENST00000527253 ACOT12Q8WYK0 555 aa7.97□□□□□ -1.13
PRPF40B-204ENST00000527253 WWC2-AS2Q96NR7 200 aa7.97□□□□□ -1.13
PRPF40B-204ENST00000527253 OR4C12Q96R67 309 aa7.97□□□□□ -1.13
PRPF40B-204ENST00000527253 HSD17B10Q99714 261 aaKnown RBP7.97□□□□□ -1.13
PRPF40B-204ENST00000527253 AKIP1Q9NQ31 210 aa7.97□□□□□ -1.13
PRPF40B-204ENST00000527253 PEF1Q9UBV8 284 aaKnown RBP7.97□□□□□ -1.13
PRPF40B-204ENST00000527253 PRELID3BQ9Y3B1 194 aa7.97□□□□□ -1.13
PRPF40B-204ENST00000527253 SMAD5-AS1Q9Y6J3 95 aa7.97□□□□□ -1.13
PRPF40B-204ENST00000527253 U3KQK5 164 aa7.97□□□□□ -1.13
PRPF40B-204ENST00000527253 A0A0A6YYH2 397 aa7.96□□□□□ -1.14
PRPF40B-204ENST00000527253 A6NJ64 397 aa7.96□□□□□ -1.14
PRPF40B-204ENST00000527253 CGB1A6NKQ9 187 aa7.96□□□□□ -1.14
PRPF40B-204ENST00000527253 AIREO43918 545 aa7.96□□□□□ -1.14
PRPF40B-204ENST00000527253 PPYP01298 95 aa7.96□□□□□ -1.14
PRPF40B-204ENST00000527253 ZP3P21754 424 aa7.96□□□□□ -1.14
PRPF40B-204ENST00000527253 SYNJ2BPP57105 145 aa7.96□□□□□ -1.14
PRPF40B-204ENST00000527253 ARPC4P59998 168 aa7.96□□□□□ -1.14
PRPF40B-204ENST00000527253 RHOGP84095 191 aa7.96□□□□□ -1.14
PRPF40B-204ENST00000527253 ZNF66Q6ZN08 573 aa7.96□□□□□ -1.14
PRPF40B-204ENST00000527253 MMD2Q8IY49 270 aa7.96□□□□□ -1.14
PRPF40B-204ENST00000527253 TSPAN14Q8NG11 270 aa7.96□□□□□ -1.14
PRPF40B-204ENST00000527253 OR6Q1Q8NGQ2 317 aa7.96□□□□□ -1.14
PRPF40B-204ENST00000527253 OR13F1Q8NGS4 319 aa7.96□□□□□ -1.14
PRPF40B-204ENST00000527253 TMEM167AQ8TBQ9 72 aa7.96□□□□□ -1.14
PRPF40B-204ENST00000527253 SECTM1Q8WVN6 248 aa7.96□□□□□ -1.14
PRPF40B-204ENST00000527253 USMG5Q96IX5 58 aa7.96□□□□□ -1.14
PRPF40B-204ENST00000527253 DIABLOQ9NR28 239 aa7.96□□□□□ -1.14
PRPF40B-204ENST00000527253 DMRT1Q9Y5R6 373 aa7.96□□□□□ -1.14
PRPF40B-204ENST00000527253 HUWE1Q7Z6Z7 4374 aaKnown RBP7.95□□□□□ -1.14
PRPF40B-204ENST00000527253 A0A087WXM4 84 aa7.95□□□□□ -1.14
PRPF40B-204ENST00000527253 BMPR1BO00238 502 aa7.95□□□□□ -1.14
PRPF40B-204ENST00000527253 MPPED1O15442 326 aa7.95□□□□□ -1.14
PRPF40B-204ENST00000527253 XRCC3O43542 346 aa7.95□□□□□ -1.14
PRPF40B-204ENST00000527253 TMEM127O75204 238 aa7.95□□□□□ -1.14
PRPF40B-204ENST00000527253 KBTBD11O94819 623 aa7.95□□□□□ -1.14
PRPF40B-204ENST00000527253 OR2A4O95047 310 aa7.95□□□□□ -1.14
PRPF40B-204ENST00000527253 CSN3P07498 182 aa7.95□□□□□ -1.14
PRPF40B-204ENST00000527253 FRMD6-AS1P0C7T7 363 aa7.95□□□□□ -1.14
PRPF40B-204ENST00000527253 MSMO1Q15800 293 aa7.95□□□□□ -1.14
PRPF40B-204ENST00000527253 ADAMTSL5Q6ZMM2 481 aa7.95□□□□□ -1.14
PRPF40B-204ENST00000527253 ZNF818PQ6ZRF7 136 aa7.95□□□□□ -1.14
PRPF40B-204ENST00000527253 SSX9Q7RTT3 188 aa7.95□□□□□ -1.14
PRPF40B-204ENST00000527253 OR5AP2Q8NGF4 316 aa7.95□□□□□ -1.14
PRPF40B-204ENST00000527253 OR9G4Q8NGQ1 327 aa7.95□□□□□ -1.14
PRPF40B-204ENST00000527253 OR4S2Q8NH73 311 aa7.95□□□□□ -1.14
PRPF40B-204ENST00000527253 GIMAP1Q8WWP7 306 aa7.95□□□□□ -1.14
PRPF40B-204ENST00000527253 OR2A7Q96R45 310 aa7.95□□□□□ -1.14
PRPF40B-204ENST00000527253 SPIN2AQ99865 258 aa7.95□□□□□ -1.14
PRPF40B-204ENST00000527253 SPIN2BQ9BPZ2 258 aa7.95□□□□□ -1.14
PRPF40B-204ENST00000527253 RSRP1Q9BUV0 290 aa7.95□□□□□ -1.14
PRPF40B-204ENST00000527253 ELOVL1Q9BW60 279 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms