RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 FAAP20Q6NZ36 180 aa5.41□□□□□ -1.54
SDCBP-208ENST00000520228 CD200R1LQ6Q8B3 271 aa5.41□□□□□ -1.54
SDCBP-208ENST00000520228 DHRS11Q6UWP2 260 aa5.41□□□□□ -1.54
SDCBP-208ENST00000520228 BAIAP2L2Q6UXY1 529 aa5.41□□□□□ -1.54
SDCBP-208ENST00000520228 C12orf54Q6X4T0 127 aa5.41□□□□□ -1.54
SDCBP-208ENST00000520228 COX8CQ7Z4L0 72 aa5.41□□□□□ -1.54
SDCBP-208ENST00000520228 LHFPL4Q7Z7J7 247 aa5.41□□□□□ -1.54
SDCBP-208ENST00000520228 OR6M1Q8NGM8 313 aa5.41□□□□□ -1.54
SDCBP-208ENST00000520228 RFESDQ8TAC1 157 aa5.41□□□□□ -1.54
SDCBP-208ENST00000520228 NDNFQ8TB73 568 aa5.41□□□□□ -1.54
SDCBP-208ENST00000520228 MALSU1Q96EH3 234 aa5.41□□□□□ -1.54
SDCBP-208ENST00000520228 NEDD4LQ96PU5 975 aa5.41□□□□□ -1.54
SDCBP-208ENST00000520228 C5orf66Q9H5L9 145 aa5.41□□□□□ -1.54
SDCBP-208ENST00000520228 CALYQ9NYX4 217 aa5.41□□□□□ -1.54
SDCBP-208ENST00000520228 ZNRD1Q9P1U0 126 aa5.41□□□□□ -1.54
SDCBP-208ENST00000520228 AK6Q9Y3D8 172 aaKnown RBP5.41□□□□□ -1.54
SDCBP-208ENST00000520228 TBL2Q9Y4P3 447 aaKnown RBP5.41□□□□□ -1.54
SDCBP-208ENST00000520228 V9GY05 133 aa5.41□□□□□ -1.54
SDCBP-208ENST00000520228 TENM1Q9UKZ4 2725 aa5.41□□□□□ -1.54
SDCBP-208ENST00000520228 A0A087WZ39 114 aa5.4□□□□□ -1.54
SDCBP-208ENST00000520228 TRAV1-2A0A0B4J238 106 aa5.4□□□□□ -1.54
SDCBP-208ENST00000520228 H3BUX3 64 aa5.4□□□□□ -1.54
SDCBP-208ENST00000520228 H7C423 109 aa5.4□□□□□ -1.54
SDCBP-208ENST00000520228 AIPO00170 330 aa5.4□□□□□ -1.54
SDCBP-208ENST00000520228 TOR1AO14656 332 aa5.4□□□□□ -1.54
SDCBP-208ENST00000520228 PDCD6O75340 191 aa5.4□□□□□ -1.54
SDCBP-208ENST00000520228 CA11O75493 328 aa5.4□□□□□ -1.54
SDCBP-208ENST00000520228 NFYBP25208 207 aa5.4□□□□□ -1.54
SDCBP-208ENST00000520228 PAX6P26367 422 aa5.4□□□□□ -1.54
SDCBP-208ENST00000520228 HTR1DP28221 377 aa5.4□□□□□ -1.54
SDCBP-208ENST00000520228 PRRX1P54821 245 aa5.4□□□□□ -1.54
SDCBP-208ENST00000520228 KRTAP10-6P60371 365 aaPredicted RBP5.4□□□□□ -1.54
SDCBP-208ENST00000520228 RPS27AP62979 156 aaKnown RBP5.4□□□□□ -1.54
SDCBP-208ENST00000520228 QRFPP83859 136 aa5.4□□□□□ -1.54
SDCBP-208ENST00000520228 NEDD8Q15843 81 aa5.4□□□□□ -1.54
SDCBP-208ENST00000520228 SSX2Q16385 188 aa5.4□□□□□ -1.54
SDCBP-208ENST00000520228 AANATQ16613 207 aa5.4□□□□□ -1.54
SDCBP-208ENST00000520228 LTC4SQ16873 150 aa5.4□□□□□ -1.54
SDCBP-208ENST00000520228 LRRC75BQ2VPJ9 315 aa5.4□□□□□ -1.54
SDCBP-208ENST00000520228 MINOS1Q5TGZ0 78 aa5.4□□□□□ -1.54
SDCBP-208ENST00000520228 C22orf42Q6IC83 251 aa5.4□□□□□ -1.54
SDCBP-208ENST00000520228 GDPGP1Q6ZNW5 385 aa5.4□□□□□ -1.54
SDCBP-208ENST00000520228 C3orf56Q8N813 242 aa5.4□□□□□ -1.54
SDCBP-208ENST00000520228 OR4D10Q8NGI6 311 aa5.4□□□□□ -1.54
SDCBP-208ENST00000520228 ZNF596Q8TC21 504 aa5.4□□□□□ -1.54
SDCBP-208ENST00000520228 TAF15Q92804 592 aaKnown RBP eCLIP5.4□□□□□ -1.54
SDCBP-208ENST00000520228 FAM3DQ96BQ1 224 aa5.4□□□□□ -1.54
SDCBP-208ENST00000520228 SSX3Q99909 188 aa5.4□□□□□ -1.54
SDCBP-208ENST00000520228 ATG101Q9BSB4 218 aa5.4□□□□□ -1.54
SDCBP-208ENST00000520228 TMEM59Q9BXS4 323 aa5.4□□□□□ -1.54
SDCBP-208ENST00000520228 LINC00574Q9H8X3 128 aa5.4□□□□□ -1.54
SDCBP-208ENST00000520228 IDI2-AS1Q9NZ38 188 aa5.4□□□□□ -1.54
SDCBP-208ENST00000520228 DPM3Q9P2X0 92 aa5.4□□□□□ -1.54
SDCBP-208ENST00000520228 VPREB3Q9UKI3 123 aa5.4□□□□□ -1.54
SDCBP-208ENST00000520228 TRAPPC2LQ9UL33 140 aa5.4□□□□□ -1.54
SDCBP-208ENST00000520228 SSR3Q9UNL2 185 aa5.4□□□□□ -1.54
SDCBP-208ENST00000520228 MINOS1-NBL1R4GNA1 71 aa5.4□□□□□ -1.54
SDCBP-208ENST00000520228 A0A087WXM4 84 aa5.39□□□□□ -1.55
SDCBP-208ENST00000520228 IFITM5A6NNB3 132 aa5.39□□□□□ -1.55
SDCBP-208ENST00000520228 VGLL3A8MV65 326 aa5.39□□□□□ -1.55
SDCBP-208ENST00000520228 TMEM14DPA8MWL7 114 aa5.39□□□□□ -1.55
SDCBP-208ENST00000520228 LEUTXA8MZ59 168 aa5.39□□□□□ -1.55
SDCBP-208ENST00000520228 ORC5O43913 435 aa5.39□□□□□ -1.55
SDCBP-208ENST00000520228 TNFAIP8O95379 198 aa5.39□□□□□ -1.55
SDCBP-208ENST00000520228 IGHV3-7P01780 117 aa5.39□□□□□ -1.55
SDCBP-208ENST00000520228 RAB3BP20337 219 aa5.39□□□□□ -1.55
SDCBP-208ENST00000520228 CD34P28906 385 aa5.39□□□□□ -1.55
SDCBP-208ENST00000520228 BLVRBP30043 206 aaPredicted RBP5.39□□□□□ -1.55
SDCBP-208ENST00000520228 FGF9P31371 208 aaPredicted RBP5.39□□□□□ -1.55
SDCBP-208ENST00000520228 SSTR5P35346 364 aa5.39□□□□□ -1.55
SDCBP-208ENST00000520228 CEACAM3P40198 252 aa5.39□□□□□ -1.55
SDCBP-208ENST00000520228 OR3A3P47888 321 aa5.39□□□□□ -1.55
SDCBP-208ENST00000520228 RAB13P51153 203 aa5.39□□□□□ -1.55
SDCBP-208ENST00000520228 RAG2P55895 527 aa5.39□□□□□ -1.55
SDCBP-208ENST00000520228 CLDN12P56749 244 aa5.39□□□□□ -1.55
SDCBP-208ENST00000520228 OR10A3P58181 314 aa5.39□□□□□ -1.55
SDCBP-208ENST00000520228 UNC119Q13432 240 aa5.39□□□□□ -1.55
SDCBP-208ENST00000520228 FAM189A2Q15884 450 aa5.39□□□□□ -1.55
SDCBP-208ENST00000520228 LY6EQ16553 131 aa5.39□□□□□ -1.55
SDCBP-208ENST00000520228 C2orf76Q3KRA6 126 aa5.39□□□□□ -1.55
SDCBP-208ENST00000520228 LDLRAD2Q5SZI1 272 aa5.39□□□□□ -1.55
SDCBP-208ENST00000520228 C6orf183Q5T699 404 aa5.39□□□□□ -1.55
SDCBP-208ENST00000520228 SYT6Q5T7P8 510 aaPredicted RBP5.39□□□□□ -1.55
SDCBP-208ENST00000520228 HES5Q5TA89 166 aa5.39□□□□□ -1.55
SDCBP-208ENST00000520228 C11orf88Q6PI97 169 aa5.39□□□□□ -1.55
SDCBP-208ENST00000520228 OR2W3Q7Z3T1 314 aa5.39□□□□□ -1.55
SDCBP-208ENST00000520228 CROCCP3Q8IVE0 287 aa5.39□□□□□ -1.55
SDCBP-208ENST00000520228 DYNAPQ8N1N2 210 aa5.39□□□□□ -1.55
SDCBP-208ENST00000520228 OR10A7Q8NGE5 316 aa5.39□□□□□ -1.55
SDCBP-208ENST00000520228 OR51D1Q8NGF3 324 aa5.39□□□□□ -1.55
SDCBP-208ENST00000520228 OR4P4Q8NGL7 312 aa5.39□□□□□ -1.55
SDCBP-208ENST00000520228 OR4F5Q8NH21 305 aa5.39□□□□□ -1.55
SDCBP-208ENST00000520228 OR4K15Q8NH41 348 aa5.39□□□□□ -1.55
SDCBP-208ENST00000520228 OR9G1Q8NH87 305 aa5.39□□□□□ -1.55
SDCBP-208ENST00000520228 ARL11Q969Q4 196 aa5.39□□□□□ -1.55
SDCBP-208ENST00000520228 CREB3L1Q96BA8 519 aa5.39□□□□□ -1.55
SDCBP-208ENST00000520228 FAAP24Q9BTP7 215 aa5.39□□□□□ -1.55
SDCBP-208ENST00000520228 TM2D1Q9BX74 207 aa5.39□□□□□ -1.55
SDCBP-208ENST00000520228 BEX1Q9HBH7 125 aa5.39□□□□□ -1.55
SDCBP-208ENST00000520228 ZNF286AQ9HBT8 521 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms