RNA–Protein interactions for RNA: ENST00000519848.1

PABPC1-213, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 676 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-213ENST00000519848 PITPNAQ00169 270 aa6.54□□□□□ -1.36
PABPC1-213ENST00000519848 ZNF367Q7RTV3 350 aa6.54□□□□□ -1.36
PABPC1-213ENST00000519848 OR5H6Q8NGV6 325 aa6.54□□□□□ -1.36
PABPC1-213ENST00000519848 CACNG8Q8WXS5 425 aa6.54□□□□□ -1.36
PABPC1-213ENST00000519848 RAB3CQ96E17 227 aa6.54□□□□□ -1.36
PABPC1-213ENST00000519848 CCDC140Q96MF4 163 aa6.54□□□□□ -1.36
PABPC1-213ENST00000519848 FAM110AQ9BQ89 295 aa6.54□□□□□ -1.36
PABPC1-213ENST00000519848 URM1Q9BTM9 101 aaKnown RBP6.54□□□□□ -1.36
PABPC1-213ENST00000519848 TINAGL1Q9GZM7 467 aaPredicted RBP6.54□□□□□ -1.36
PABPC1-213ENST00000519848 ZNF430Q9H8G1 570 aaPredicted RBP6.54□□□□□ -1.36
PABPC1-213ENST00000519848 AKIP1Q9NQ31 210 aa6.54□□□□□ -1.36
PABPC1-213ENST00000519848 DNAH1Q9P2D7 4330 aa6.54□□□□□ -1.36
PABPC1-213ENST00000519848 TRBV9A0A0B4J1U6 114 aa6.53□□□□□ -1.36
PABPC1-213ENST00000519848 TRAV1-2A0A0B4J238 106 aa6.53□□□□□ -1.36
PABPC1-213ENST00000519848 TRDV1A0A1B0GX56 115 aa6.53□□□□□ -1.36
PABPC1-213ENST00000519848 TMEM235A6NFC5 223 aa6.53□□□□□ -1.36
PABPC1-213ENST00000519848 FCER2P06734 321 aa6.53□□□□□ -1.36
PABPC1-213ENST00000519848 AREGP15514 252 aa6.53□□□□□ -1.36
PABPC1-213ENST00000519848 PRSS8Q16651 343 aa6.53□□□□□ -1.36
PABPC1-213ENST00000519848 LINC00322Q6ZN03 302 aaPredicted RBP6.53□□□□□ -1.36
PABPC1-213ENST00000519848 TCTEX1D1Q8N7M0 179 aa6.53□□□□□ -1.36
PABPC1-213ENST00000519848 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.53□□□□□ -1.36
PABPC1-213ENST00000519848 OR56B1Q8NGI3 324 aa6.53□□□□□ -1.36
PABPC1-213ENST00000519848 LGALS14Q8TCE9 139 aa6.53□□□□□ -1.36
PABPC1-213ENST00000519848 SRSF12Q8WXF0 261 aaKnown RBP6.53□□□□□ -1.36
PABPC1-213ENST00000519848 FLYWCH2Q96CP2 140 aaKnown RBP6.53□□□□□ -1.36
PABPC1-213ENST00000519848 RSRP1Q9BUV0 290 aa6.53□□□□□ -1.36
PABPC1-213ENST00000519848 RIMS4Q9H426 269 aaPredicted RBP6.53□□□□□ -1.36
PABPC1-213ENST00000519848 SCN3BQ9NY72 215 aa6.53□□□□□ -1.36
PABPC1-213ENST00000519848 ZNF221Q9UK13 617 aa6.53□□□□□ -1.36
PABPC1-213ENST00000519848 TPRKBQ9Y3C4 175 aa6.53□□□□□ -1.36
PABPC1-213ENST00000519848 LRRC42Q9Y546 428 aa6.53□□□□□ -1.36
PABPC1-213ENST00000519848 PLECQ15149 4684 aaKnown RBP6.52□□□□□ -1.37
PABPC1-213ENST00000519848 TRAV3A0A0B4J244 114 aa6.52□□□□□ -1.37
PABPC1-213ENST00000519848 LCE6AA0A183 80 aa6.52□□□□□ -1.37
PABPC1-213ENST00000519848 MSGN1A6NI15 193 aa6.52□□□□□ -1.37
PABPC1-213ENST00000519848 PPP5D1E7EU14 171 aa6.52□□□□□ -1.37
PABPC1-213ENST00000519848 ARL6IP5O75915 188 aa6.52□□□□□ -1.37
PABPC1-213ENST00000519848 IGHV3-23P01764 117 aa6.52□□□□□ -1.37
PABPC1-213ENST00000519848 APOA2P02652 100 aa6.52□□□□□ -1.37
PABPC1-213ENST00000519848 IL6RP08887 468 aaPredicted RBP6.52□□□□□ -1.37
PABPC1-213ENST00000519848 CD7P09564 240 aa6.52□□□□□ -1.37
PABPC1-213ENST00000519848 EXOSC2Q13868 293 aaKnown RBP6.52□□□□□ -1.37
PABPC1-213ENST00000519848 TNXAQ16473 311 aa6.52□□□□□ -1.37
PABPC1-213ENST00000519848 HAGHQ16775 308 aa6.52□□□□□ -1.37
PABPC1-213ENST00000519848 UBE2UQ5VVX9 321 aa6.52□□□□□ -1.37
PABPC1-213ENST00000519848 Q6ZS49 121 aa6.52□□□□□ -1.37
PABPC1-213ENST00000519848 SPARTQ8N0X7 666 aa6.52□□□□□ -1.37
PABPC1-213ENST00000519848 GVQW1Q8N7I0 195 aa6.52□□□□□ -1.37
PABPC1-213ENST00000519848 OR9G4Q8NGQ1 327 aa6.52□□□□□ -1.37
PABPC1-213ENST00000519848 FANCD2OSQ96PS1 177 aa6.52□□□□□ -1.37
PABPC1-213ENST00000519848 CITED4Q96RK1 184 aa6.52□□□□□ -1.37
PABPC1-213ENST00000519848 TSNAXQ99598 290 aaKnown RBP6.52□□□□□ -1.37
PABPC1-213ENST00000519848 RNF5Q99942 180 aa6.52□□□□□ -1.37
PABPC1-213ENST00000519848 OR51E2Q9H255 320 aa6.52□□□□□ -1.37
PABPC1-213ENST00000519848 SLA2Q9H6Q3 261 aa6.52□□□□□ -1.37
PABPC1-213ENST00000519848 PLEKHA3Q9HB20 300 aa6.52□□□□□ -1.37
PABPC1-213ENST00000519848 TXNL4BQ9NX01 149 aaKnown RBP6.52□□□□□ -1.37
PABPC1-213ENST00000519848 RAB22AQ9UL26 194 aa6.52□□□□□ -1.37
PABPC1-213ENST00000519848 RBMY1BA6NDE4 496 aaKnown RBP6.51□□□□□ -1.37
PABPC1-213ENST00000519848 RBMY1EA6NEQ0 496 aaKnown RBP6.51□□□□□ -1.37
PABPC1-213ENST00000519848 ZNF785A8K8V0 405 aa6.51□□□□□ -1.37
PABPC1-213ENST00000519848 A8MZ25 164 aa6.51□□□□□ -1.37
PABPC1-213ENST00000519848 C3orf84H3BNL1 204 aa6.51□□□□□ -1.37
PABPC1-213ENST00000519848 H3BUA1 57 aa6.51□□□□□ -1.37
PABPC1-213ENST00000519848 SHOXO15266 292 aa6.51□□□□□ -1.37
PABPC1-213ENST00000519848 TUSC2O75896 110 aa6.51□□□□□ -1.37
PABPC1-213ENST00000519848 OR2J3O76001 311 aa6.51□□□□□ -1.37
PABPC1-213ENST00000519848 RBMY1DP0C7P1 496 aaKnown RBP6.51□□□□□ -1.37
PABPC1-213ENST00000519848 RAB3BP20337 219 aa6.51□□□□□ -1.37
PABPC1-213ENST00000519848 RAB6AP20340 208 aa6.51□□□□□ -1.37
PABPC1-213ENST00000519848 UBE2KP61086 200 aa6.51□□□□□ -1.37
PABPC1-213ENST00000519848 RHOGP84095 191 aa6.51□□□□□ -1.37
PABPC1-213ENST00000519848 EWSR1Q01844 656 aaKnown RBP eCLIP6.51□□□□□ -1.37
PABPC1-213ENST00000519848 PYHIN1Q6K0P9 492 aa6.51□□□□□ -1.37
PABPC1-213ENST00000519848 PUSL1Q8N0Z8 303 aaKnown RBP6.51□□□□□ -1.37
PABPC1-213ENST00000519848 OR6Q1Q8NGQ2 317 aa6.51□□□□□ -1.37
PABPC1-213ENST00000519848 OR10J5Q8NHC4 309 aa6.51□□□□□ -1.37
PABPC1-213ENST00000519848 SNAPC3Q92966 411 aa6.51□□□□□ -1.37
PABPC1-213ENST00000519848 ZNF355PQ9NSJ1 428 aa6.51□□□□□ -1.37
PABPC1-213ENST00000519848 COA4Q9NYJ1 87 aa6.51□□□□□ -1.37
PABPC1-213ENST00000519848 STUB1Q9UNE7 303 aa6.51□□□□□ -1.37
PABPC1-213ENST00000519848 MFSD2BA6NFX1 497 aa6.5□□□□□ -1.37
PABPC1-213ENST00000519848 ERICH4A6NGS2 130 aa6.5□□□□□ -1.37
PABPC1-213ENST00000519848 FCGR3BO75015 233 aa6.5□□□□□ -1.37
PABPC1-213ENST00000519848 NDUFB8O95169 186 aa6.5□□□□□ -1.37
PABPC1-213ENST00000519848 BRI3O95415 125 aa6.5□□□□□ -1.37
PABPC1-213ENST00000519848 HLA-DQB1P01920 261 aa6.5□□□□□ -1.37
PABPC1-213ENST00000519848 REG1AP05451 166 aa6.5□□□□□ -1.37
PABPC1-213ENST00000519848 OR9G9P0C7N8 305 aa6.5□□□□□ -1.37
PABPC1-213ENST00000519848 PSMA1P25786 263 aaKnown RBP6.5□□□□□ -1.37
PABPC1-213ENST00000519848 DCTN2Q13561 401 aaKnown RBP6.5□□□□□ -1.37
PABPC1-213ENST00000519848 CDK10Q15131 360 aa6.5□□□□□ -1.37
PABPC1-213ENST00000519848 TRAM1Q15629 374 aa6.5□□□□□ -1.37
PABPC1-213ENST00000519848 CD300EQ496F6 205 aaPredicted RBP6.5□□□□□ -1.37
PABPC1-213ENST00000519848 CDNFQ49AH0 187 aa6.5□□□□□ -1.37
PABPC1-213ENST00000519848 UNQ9165/PRO28630Q6UXU0 137 aa6.5□□□□□ -1.37
PABPC1-213ENST00000519848 KCTD9Q7L273 389 aa6.5□□□□□ -1.37
PABPC1-213ENST00000519848 ACOT12Q8WYK0 555 aa6.5□□□□□ -1.37
PABPC1-213ENST00000519848 WDR89Q96FK6 387 aaPredicted RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms