RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 PRH1P02810 166 aa9.46□□□□□ -0.9
CSMD1-205ENST00000519623 SAA1P0DJI8 122 aaPredicted RBP9.46□□□□□ -0.9
CSMD1-205ENST00000519623 IGKV1-13P0DP09 117 aa9.46□□□□□ -0.9
CSMD1-205ENST00000519623 NFYAP23511 347 aaPredicted RBP9.46□□□□□ -0.9
CSMD1-205ENST00000519623 BRWD1-AS2P59051 145 aa9.46□□□□□ -0.9
CSMD1-205ENST00000519623 GABARAPL2P60520 117 aa9.46□□□□□ -0.9
CSMD1-205ENST00000519623 RHOGP84095 191 aa9.46□□□□□ -0.9
CSMD1-205ENST00000519623 EIF4EBP1Q13541 118 aaPredicted RBP9.46□□□□□ -0.9
CSMD1-205ENST00000519623 TATDN3Q17R31 274 aa9.46□□□□□ -0.9
CSMD1-205ENST00000519623 TTC9CQ8N5M4 171 aa9.46□□□□□ -0.9
CSMD1-205ENST00000519623 ZNF645Q8N7E2 425 aa9.46□□□□□ -0.9
CSMD1-205ENST00000519623 SNAPC3Q92966 411 aa9.46□□□□□ -0.9
CSMD1-205ENST00000519623 AKIP1Q9NQ31 210 aa9.46□□□□□ -0.9
CSMD1-205ENST00000519623 RBMX2Q9Y388 322 aaKnown RBP9.46□□□□□ -0.9
CSMD1-205ENST00000519623 DYNC2H1Q8NCM8 4307 aaKnown RBP9.46□□□□□ -0.9
CSMD1-205ENST00000519623 IZUMO1RA6ND01 250 aa9.45□□□□□ -0.9
CSMD1-205ENST00000519623 TMEM235A6NFC5 223 aa9.45□□□□□ -0.9
CSMD1-205ENST00000519623 BMPR1BO00238 502 aa9.45□□□□□ -0.9
CSMD1-205ENST00000519623 SSX5O60225 188 aa9.45□□□□□ -0.9
CSMD1-205ENST00000519623 FCGR3BO75015 233 aa9.45□□□□□ -0.9
CSMD1-205ENST00000519623 CDK10Q15131 360 aa9.45□□□□□ -0.9
CSMD1-205ENST00000519623 RPEL1Q2QD12 228 aa9.45□□□□□ -0.9
CSMD1-205ENST00000519623 C10orf55Q5SWW7 151 aa9.45□□□□□ -0.9
CSMD1-205ENST00000519623 CNIH2Q6PI25 160 aa9.45□□□□□ -0.9
CSMD1-205ENST00000519623 ADAMTSL5Q6ZMM2 481 aa9.45□□□□□ -0.9
CSMD1-205ENST00000519623 TPRA1Q86W33 373 aa9.45□□□□□ -0.9
CSMD1-205ENST00000519623 SGPP2Q8IWX5 399 aa9.45□□□□□ -0.9
CSMD1-205ENST00000519623 NUDCD2Q8WVJ2 157 aa9.45□□□□□ -0.9
CSMD1-205ENST00000519623 ACOT12Q8WYK0 555 aa9.45□□□□□ -0.9
CSMD1-205ENST00000519623 DCUN1D5Q9BTE7 237 aa9.45□□□□□ -0.9
CSMD1-205ENST00000519623 DMRT1Q9Y5R6 373 aa9.45□□□□□ -0.9
CSMD1-205ENST00000519623 FAM223BA6NKX1 122 aa9.44□□□□□ -0.9
CSMD1-205ENST00000519623 MPPED1O15442 326 aa9.44□□□□□ -0.9
CSMD1-205ENST00000519623 TUSC2O75896 110 aa9.44□□□□□ -0.9
CSMD1-205ENST00000519623 SLC22A5O76082 557 aa9.44□□□□□ -0.9
CSMD1-205ENST00000519623 OR2A4O95047 310 aa9.44□□□□□ -0.9
CSMD1-205ENST00000519623 LYL1P12980 280 aa9.44□□□□□ -0.9
CSMD1-205ENST00000519623 ATP5G2Q06055 141 aa9.44□□□□□ -0.9
CSMD1-205ENST00000519623 KCTD9Q7L273 389 aa9.44□□□□□ -0.9
CSMD1-205ENST00000519623 FAM223AQ8IWN6 122 aa9.44□□□□□ -0.9
CSMD1-205ENST00000519623 MMD2Q8IY49 270 aa9.44□□□□□ -0.9
CSMD1-205ENST00000519623 VKORC1L1Q8N0U8 176 aa9.44□□□□□ -0.9
CSMD1-205ENST00000519623 SPIN2AQ99865 258 aa9.44□□□□□ -0.9
CSMD1-205ENST00000519623 SPIN2BQ9BPZ2 258 aa9.44□□□□□ -0.9
CSMD1-205ENST00000519623 OR51E2Q9H255 320 aa9.44□□□□□ -0.9
CSMD1-205ENST00000519623 EDA2RQ9HAV5 297 aa9.44□□□□□ -0.9
CSMD1-205ENST00000519623 DAPK2Q9UIK4 370 aa9.44□□□□□ -0.9
CSMD1-205ENST00000519623 ANXA10Q9UJ72 324 aa9.44□□□□□ -0.9
CSMD1-205ENST00000519623 PRELID3BQ9Y3B1 194 aa9.44□□□□□ -0.9
CSMD1-205ENST00000519623 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.43□□□□□ -0.9
CSMD1-205ENST00000519623 A0A1B0GW64 132 aa9.43□□□□□ -0.9
CSMD1-205ENST00000519623 HMX3A6NHT5 357 aa9.43□□□□□ -0.9
CSMD1-205ENST00000519623 TEX22C9J3V5 150 aa9.43□□□□□ -0.9
CSMD1-205ENST00000519623 E7EUB6 86 aa9.43□□□□□ -0.9
CSMD1-205ENST00000519623 ACTL6BO94805 426 aa9.43□□□□□ -0.9
CSMD1-205ENST00000519623 IL6RP08887 468 aaPredicted RBP9.43□□□□□ -0.9
CSMD1-205ENST00000519623 PSMB9P28065 219 aa9.43□□□□□ -0.9
CSMD1-205ENST00000519623 SDC2P34741 201 aa9.43□□□□□ -0.9
CSMD1-205ENST00000519623 HAGHQ16775 308 aa9.43□□□□□ -0.9
CSMD1-205ENST00000519623 OR2B11Q5JQS5 317 aa9.43□□□□□ -0.9
CSMD1-205ENST00000519623 SFXN4Q6P4A7 337 aa9.43□□□□□ -0.9
CSMD1-205ENST00000519623 PUSL1Q8N0Z8 303 aaKnown RBP9.43□□□□□ -0.9
CSMD1-205ENST00000519623 Q8N402 240 aa9.43□□□□□ -0.9
CSMD1-205ENST00000519623 MFSD4AQ8N468 514 aa9.43□□□□□ -0.9
CSMD1-205ENST00000519623 NECAP1Q8NC96 275 aa9.43□□□□□ -0.9
CSMD1-205ENST00000519623 LGALS14Q8TCE9 139 aa9.43□□□□□ -0.9
CSMD1-205ENST00000519623 HSD17B10Q99714 261 aaKnown RBP9.43□□□□□ -0.9
CSMD1-205ENST00000519623 YTHDF1Q9BYJ9 559 aaKnown RBP9.43□□□□□ -0.9
CSMD1-205ENST00000519623 SSR3Q9UNL2 185 aa9.43□□□□□ -0.9
CSMD1-205ENST00000519623 RRP15Q9Y3B9 282 aaKnown RBP9.43□□□□□ -0.9
CSMD1-205ENST00000519623 CSMD3Q7Z407 3707 aa9.43□□□□□ -0.9
CSMD1-205ENST00000519623 ZNF785A8K8V0 405 aa9.42□□□□□ -0.9
CSMD1-205ENST00000519623 AIREO43918 545 aa9.42□□□□□ -0.9
CSMD1-205ENST00000519623 CREBL2O60519 120 aaPredicted RBP9.42□□□□□ -0.9
CSMD1-205ENST00000519623 OR2J3O76001 311 aa9.42□□□□□ -0.9
CSMD1-205ENST00000519623 SCGNO76038 276 aa9.42□□□□□ -0.9
CSMD1-205ENST00000519623 CLEC2LP0C7M8 214 aa9.42□□□□□ -0.9
CSMD1-205ENST00000519623 CD36P16671 472 aa9.42□□□□□ -0.9
CSMD1-205ENST00000519623 GNG2P59768 71 aa9.42□□□□□ -0.9
CSMD1-205ENST00000519623 EXOSC2Q13868 293 aaKnown RBP9.42□□□□□ -0.9
CSMD1-205ENST00000519623 LCN12Q6JVE5 192 aa9.42□□□□□ -0.9
CSMD1-205ENST00000519623 OR5H6Q8NGV6 325 aa9.42□□□□□ -0.9
CSMD1-205ENST00000519623 TMEM167AQ8TBQ9 72 aa9.42□□□□□ -0.9
CSMD1-205ENST00000519623 FCGR1BQ92637 280 aa9.42□□□□□ -0.9
CSMD1-205ENST00000519623 OR2A7Q96R45 310 aa9.42□□□□□ -0.9
CSMD1-205ENST00000519623 GPHA2Q96T91 129 aa9.42□□□□□ -0.9
CSMD1-205ENST00000519623 RNF167Q9H6Y7 350 aa9.42□□□□□ -0.9
CSMD1-205ENST00000519623 RHBDL2Q9NX52 303 aa9.42□□□□□ -0.9
CSMD1-205ENST00000519623 PEMTQ9UBM1 199 aa9.42□□□□□ -0.9
CSMD1-205ENST00000519623 SPATA2Q9UM82 520 aa9.42□□□□□ -0.9
CSMD1-205ENST00000519623 MRPS7Q9Y2R9 242 aaKnown RBP9.42□□□□□ -0.9
CSMD1-205ENST00000519623 NPIPB5A8MRT5 1133 aa9.41□□□□□ -0.9
CSMD1-205ENST00000519623 KBTBD11O94819 623 aa9.41□□□□□ -0.9
CSMD1-205ENST00000519623 ATP6V1G2O95670 118 aa9.41□□□□□ -0.9
CSMD1-205ENST00000519623 ZNF735P0CB33 412 aa9.41□□□□□ -0.9
CSMD1-205ENST00000519623 PTHLHP12272 177 aa9.41□□□□□ -0.9
CSMD1-205ENST00000519623 KLK9Q2XQG4 91 aa9.41□□□□□ -0.9
CSMD1-205ENST00000519623 C15orf32Q32M92 178 aa9.41□□□□□ -0.9
CSMD1-205ENST00000519623 CD300EQ496F6 205 aaPredicted RBP9.41□□□□□ -0.9
CSMD1-205ENST00000519623 LINC00322Q6ZN03 302 aaPredicted RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms