RNA–Protein interactions for RNA: ENST00000511732.1

COL1A1-213, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-213ENST00000511732 ELOVL1Q9BW60 279 aa11.69□□□□□ -0.54
COL1A1-213ENST00000511732 YTHDF1Q9BYJ9 559 aaKnown RBP11.69□□□□□ -0.54
COL1A1-213ENST00000511732 ZNF430Q9H8G1 570 aaPredicted RBP11.69□□□□□ -0.54
COL1A1-213ENST00000511732 PEF1Q9UBV8 284 aaKnown RBP11.69□□□□□ -0.54
COL1A1-213ENST00000511732 RBMX2Q9Y388 322 aaKnown RBP11.69□□□□□ -0.54
COL1A1-213ENST00000511732 TUSC2O75896 110 aa11.68□□□□□ -0.54
COL1A1-213ENST00000511732 OR9G9P0C7N8 305 aa11.68□□□□□ -0.54
COL1A1-213ENST00000511732 AADACP22760 399 aa11.68□□□□□ -0.54
COL1A1-213ENST00000511732 SYNJ2BPP57105 145 aa11.68□□□□□ -0.54
COL1A1-213ENST00000511732 BRWD1-AS2P59051 145 aa11.68□□□□□ -0.54
COL1A1-213ENST00000511732 GNG2P59768 71 aa11.68□□□□□ -0.54
COL1A1-213ENST00000511732 CDK10Q15131 360 aa11.68□□□□□ -0.54
COL1A1-213ENST00000511732 ZNF773Q6PK81 442 aa11.68□□□□□ -0.54
COL1A1-213ENST00000511732 KCTD9Q7L273 389 aa11.68□□□□□ -0.54
COL1A1-213ENST00000511732 VKORC1L1Q8N0U8 176 aa11.68□□□□□ -0.54
COL1A1-213ENST00000511732 OR9G4Q8NGQ1 327 aa11.68□□□□□ -0.54
COL1A1-213ENST00000511732 SLC25A38Q96DW6 304 aa11.68□□□□□ -0.54
COL1A1-213ENST00000511732 USMG5Q96IX5 58 aa11.68□□□□□ -0.54
COL1A1-213ENST00000511732 RCHY1Q96PM5 261 aa11.68□□□□□ -0.54
COL1A1-213ENST00000511732 GPHA2Q96T91 129 aa11.68□□□□□ -0.54
COL1A1-213ENST00000511732 DCUN1D5Q9BTE7 237 aa11.68□□□□□ -0.54
COL1A1-213ENST00000511732 RHBDL2Q9NX52 303 aa11.68□□□□□ -0.54
COL1A1-213ENST00000511732 ANXA10Q9UJ72 324 aa11.68□□□□□ -0.54
COL1A1-213ENST00000511732 PTHLHP12272 177 aa11.67□□□□□ -0.54
COL1A1-213ENST00000511732 ANKRD13BQ86YJ7 626 aa11.67□□□□□ -0.54
COL1A1-213ENST00000511732 Q9H521 79 aa11.67□□□□□ -0.54
COL1A1-213ENST00000511732 AKIP1Q9NQ31 210 aa11.67□□□□□ -0.54
COL1A1-213ENST00000511732 TRBV9A0A0B4J1U6 114 aa11.66□□□□□ -0.54
COL1A1-213ENST00000511732 E7EUB6 86 aa11.66□□□□□ -0.54
COL1A1-213ENST00000511732 MPPED1O15442 326 aa11.66□□□□□ -0.54
COL1A1-213ENST00000511732 SCGNO76038 276 aa11.66□□□□□ -0.54
COL1A1-213ENST00000511732 CSN3P07498 182 aa11.66□□□□□ -0.54
COL1A1-213ENST00000511732 IGHV4-30-4P0DP06 118 aa11.66□□□□□ -0.54
COL1A1-213ENST00000511732 RHOGP84095 191 aa11.66□□□□□ -0.54
COL1A1-213ENST00000511732 GVQW1Q8N7I0 195 aa11.66□□□□□ -0.54
COL1A1-213ENST00000511732 SPATA2Q9UM82 520 aa11.66□□□□□ -0.54
COL1A1-213ENST00000511732 TENM3Q9P273 2699 aa11.65□□□□□ -0.54
COL1A1-213ENST00000511732 NBEAL2Q6ZNJ1 2754 aa11.65□□□□□ -0.54
COL1A1-213ENST00000511732 TRAV18A0A075B6X5 111 aa11.65□□□□□ -0.54
COL1A1-213ENST00000511732 LOC100506127A0A0U1RQW1 187 aa11.65□□□□□ -0.54
COL1A1-213ENST00000511732 HMX3A6NHT5 357 aa11.65□□□□□ -0.54
COL1A1-213ENST00000511732 SLC22A5O76082 557 aa11.65□□□□□ -0.54
COL1A1-213ENST00000511732 CD36P16671 472 aa11.65□□□□□ -0.54
COL1A1-213ENST00000511732 IDNKQ5T6J7 187 aa11.65□□□□□ -0.54
COL1A1-213ENST00000511732 C19orf35Q6ZS72 473 aa11.65□□□□□ -0.54
COL1A1-213ENST00000511732 MMD2Q8IY49 270 aa11.65□□□□□ -0.54
COL1A1-213ENST00000511732 MFSD4AQ8N468 514 aa11.65□□□□□ -0.54
COL1A1-213ENST00000511732 TTC9CQ8N5M4 171 aa11.65□□□□□ -0.54
COL1A1-213ENST00000511732 C19orf73Q9NVV2 129 aa11.65□□□□□ -0.54
COL1A1-213ENST00000511732 TAS2R8Q9NYW2 309 aa11.65□□□□□ -0.54
COL1A1-213ENST00000511732 MRPS7Q9Y2R9 242 aaKnown RBP11.65□□□□□ -0.54
COL1A1-213ENST00000511732 PRELID3BQ9Y3B1 194 aa11.65□□□□□ -0.54
COL1A1-213ENST00000511732 A0A1B0GW64 132 aa11.64□□□□□ -0.55
COL1A1-213ENST00000511732 IZUMO1RA6ND01 250 aa11.64□□□□□ -0.55
COL1A1-213ENST00000511732 A8MZ25 164 aa11.64□□□□□ -0.55
COL1A1-213ENST00000511732 TEX22C9J3V5 150 aa11.64□□□□□ -0.55
COL1A1-213ENST00000511732 BMPR1BO00238 502 aa11.64□□□□□ -0.55
COL1A1-213ENST00000511732 ACTL6BO94805 426 aa11.64□□□□□ -0.55
COL1A1-213ENST00000511732 SCAND1P57086 179 aa11.64□□□□□ -0.55
COL1A1-213ENST00000511732 NEDD8Q15843 81 aa11.64□□□□□ -0.55
COL1A1-213ENST00000511732 RPEL1Q2QD12 228 aa11.64□□□□□ -0.55
COL1A1-213ENST00000511732 PUSL1Q8N0Z8 303 aaKnown RBP11.64□□□□□ -0.55
COL1A1-213ENST00000511732 BEST4Q8NFU0 473 aa11.64□□□□□ -0.55
COL1A1-213ENST00000511732 TCTEX1D2Q8WW35 142 aa11.64□□□□□ -0.55
COL1A1-213ENST00000511732 HSD17B10Q99714 261 aaKnown RBP11.64□□□□□ -0.55
COL1A1-213ENST00000511732 SPIN2AQ99865 258 aa11.64□□□□□ -0.55
COL1A1-213ENST00000511732 SPIN2BQ9BPZ2 258 aa11.64□□□□□ -0.55
COL1A1-213ENST00000511732 THAP7Q9BT49 309 aaPredicted RBP11.64□□□□□ -0.55
COL1A1-213ENST00000511732 CCL28Q9NRJ3 127 aa11.64□□□□□ -0.55
COL1A1-213ENST00000511732 DMRT1Q9Y5R6 373 aa11.64□□□□□ -0.55
COL1A1-213ENST00000511732 ETV7Q9Y603 341 aa11.64□□□□□ -0.55
COL1A1-213ENST00000511732 FAM223BA6NKX1 122 aa11.63□□□□□ -0.55
COL1A1-213ENST00000511732 C3orf84H3BNL1 204 aa11.63□□□□□ -0.55
COL1A1-213ENST00000511732 TNFSF12O43508 249 aa11.63□□□□□ -0.55
COL1A1-213ENST00000511732 CREBL2O60519 120 aaPredicted RBP11.63□□□□□ -0.55
COL1A1-213ENST00000511732 OR2J3O76001 311 aa11.63□□□□□ -0.55
COL1A1-213ENST00000511732 KBTBD11O94819 623 aa11.63□□□□□ -0.55
COL1A1-213ENST00000511732 OR2A4O95047 310 aa11.63□□□□□ -0.55
COL1A1-213ENST00000511732 FCER2P06734 321 aa11.63□□□□□ -0.55
COL1A1-213ENST00000511732 IL6RP08887 468 aaPredicted RBP11.63□□□□□ -0.55
COL1A1-213ENST00000511732 FCGR2CP31995 323 aa11.63□□□□□ -0.55
COL1A1-213ENST00000511732 TGFBR1P36897 503 aa11.63□□□□□ -0.55
COL1A1-213ENST00000511732 MECP2P51608 486 aaKnown RBP11.63□□□□□ -0.55
COL1A1-213ENST00000511732 ATP5G2Q06055 141 aa11.63□□□□□ -0.55
COL1A1-213ENST00000511732 EXOSC2Q13868 293 aaKnown RBP11.63□□□□□ -0.55
COL1A1-213ENST00000511732 ADAMTSL5Q6ZMM2 481 aa11.63□□□□□ -0.55
COL1A1-213ENST00000511732 HOGA1Q86XE5 327 aa11.63□□□□□ -0.55
COL1A1-213ENST00000511732 FAM223AQ8IWN6 122 aa11.63□□□□□ -0.55
COL1A1-213ENST00000511732 OR4S2Q8NH73 311 aa11.63□□□□□ -0.55
COL1A1-213ENST00000511732 TMEM167AQ8TBQ9 72 aa11.63□□□□□ -0.55
COL1A1-213ENST00000511732 SNAPC3Q92966 411 aa11.63□□□□□ -0.55
COL1A1-213ENST00000511732 OR2A7Q96R45 310 aa11.63□□□□□ -0.55
COL1A1-213ENST00000511732 TM2D3Q9BRN9 247 aa11.63□□□□□ -0.55
COL1A1-213ENST00000511732 SIGLEC8Q9NYZ4 499 aa11.63□□□□□ -0.55
COL1A1-213ENST00000511732 DNAH7Q8WXX0 4024 aa11.62□□□□□ -0.55
COL1A1-213ENST00000511732 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.62□□□□□ -0.55
COL1A1-213ENST00000511732 MYOD1P15172 320 aa11.62□□□□□ -0.55
COL1A1-213ENST00000511732 ARPC4P59998 168 aa11.62□□□□□ -0.55
COL1A1-213ENST00000511732 TATDN3Q17R31 274 aa11.62□□□□□ -0.55
COL1A1-213ENST00000511732 ZNF66Q6ZN08 573 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms