RNA–Protein interactions for RNA: ENST00000510187.5

SQSTM1-213, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-213ENST00000510187 LOXP28300 417 aaPredicted RBP13.3□□□□□ -0.28
SQSTM1-213ENST00000510187 ERVFRD-1P60508 538 aa13.3□□□□□ -0.28
SQSTM1-213ENST00000510187 ZNF674Q2M3X9 581 aa13.3□□□□□ -0.28
SQSTM1-213ENST00000510187 SSX7Q7RTT5 188 aa13.3□□□□□ -0.28
SQSTM1-213ENST00000510187 SLC16A13Q7RTY0 426 aa13.3□□□□□ -0.28
SQSTM1-213ENST00000510187 C1orf87Q8N0U7 546 aa13.3□□□□□ -0.28
SQSTM1-213ENST00000510187 OR52L2PQ8NGH6 319 aa13.3□□□□□ -0.28
SQSTM1-213ENST00000510187 HSD17B10Q99714 261 aaKnown RBP13.3□□□□□ -0.28
SQSTM1-213ENST00000510187 SDF2L1Q9HCN8 221 aa13.3□□□□□ -0.28
SQSTM1-213ENST00000510187 PLCE1Q9P212 2302 aa13.3□□□□□ -0.28
SQSTM1-213ENST00000510187 UBR5O95071 2799 aaPredicted RBP13.3□□□□□ -0.28
SQSTM1-213ENST00000510187 CLDN34H7C241 214 aa13.3□□□□□ -0.28
SQSTM1-213ENST00000510187 J3QKU1 62 aa13.3□□□□□ -0.28
SQSTM1-213ENST00000510187 WNT9BO14905 357 aa13.3□□□□□ -0.28
SQSTM1-213ENST00000510187 S1PR2O95136 353 aa13.3□□□□□ -0.28
SQSTM1-213ENST00000510187 CXCL1P09341 107 aa13.3□□□□□ -0.28
SQSTM1-213ENST00000510187 G6PCP35575 357 aa13.3□□□□□ -0.28
SQSTM1-213ENST00000510187 HTD2P86397 168 aa13.3□□□□□ -0.28
SQSTM1-213ENST00000510187 AESQ08117 197 aa13.3□□□□□ -0.28
SQSTM1-213ENST00000510187 VWC2Q2TAL6 325 aa13.3□□□□□ -0.28
SQSTM1-213ENST00000510187 Q6ZR03 302 aa13.3□□□□□ -0.28
SQSTM1-213ENST00000510187 TMEM204Q9BSN7 226 aa13.3□□□□□ -0.28
SQSTM1-213ENST00000510187 SLC39A9Q9NUM3 307 aa13.3□□□□□ -0.28
SQSTM1-213ENST00000510187 CTXND1A0A1B0GTU2 59 aa13.29□□□□□ -0.28
SQSTM1-213ENST00000510187 PMS2P5A8MQ11 134 aa13.29□□□□□ -0.28
SQSTM1-213ENST00000510187 KRASP01116 189 aa13.29□□□□□ -0.28
SQSTM1-213ENST00000510187 ADH4P08319 380 aa13.29□□□□□ -0.28
SQSTM1-213ENST00000510187 GABRA2P47869 451 aa13.29□□□□□ -0.28
SQSTM1-213ENST00000510187 CDX1P47902 265 aaPredicted RBP13.29□□□□□ -0.28
SQSTM1-213ENST00000510187 ELLP55199 621 aaPredicted RBP13.29□□□□□ -0.28
SQSTM1-213ENST00000510187 ZNF816Q0VGE8 651 aaPredicted RBP13.29□□□□□ -0.28
SQSTM1-213ENST00000510187 OR8G2PQ6IF36 304 aa13.29□□□□□ -0.28
SQSTM1-213ENST00000510187 ZNF343Q6P1L6 599 aa13.29□□□□□ -0.28
SQSTM1-213ENST00000510187 ZNF826PQ6ZT77 177 aa13.29□□□□□ -0.28
SQSTM1-213ENST00000510187 OR10P1Q8NGE3 313 aa13.29□□□□□ -0.28
SQSTM1-213ENST00000510187 MRGPRDQ8TDS7 321 aa13.29□□□□□ -0.28
SQSTM1-213ENST00000510187 DTD1Q8TEA8 209 aa13.29□□□□□ -0.28
SQSTM1-213ENST00000510187 LHX4Q969G2 390 aa13.29□□□□□ -0.28
SQSTM1-213ENST00000510187 FAM90A9PA6NNJ1 464 aa13.28□□□□□ -0.28
SQSTM1-213ENST00000510187 CEBPZOSA8MTT3 80 aa13.28□□□□□ -0.28
SQSTM1-213ENST00000510187 C17orf98A8MV24 154 aa13.28□□□□□ -0.28
SQSTM1-213ENST00000510187 TMEM250H0YL14 139 aa13.28□□□□□ -0.28
SQSTM1-213ENST00000510187 ZNF737O75373 536 aa13.28□□□□□ -0.28
SQSTM1-213ENST00000510187 OPN1MWP04001 364 aa13.28□□□□□ -0.28
SQSTM1-213ENST00000510187 OPN1MW2P0DN77 364 aa13.28□□□□□ -0.28
SQSTM1-213ENST00000510187 OPN1MW3P0DN78 364 aa13.28□□□□□ -0.28
SQSTM1-213ENST00000510187 APOBEC3AP31941 199 aaPredicted RBP13.28□□□□□ -0.28
SQSTM1-213ENST00000510187 FGF8P55075 233 aaPredicted RBP13.28□□□□□ -0.28
SQSTM1-213ENST00000510187 COL10A1Q03692 680 aa13.28□□□□□ -0.28
SQSTM1-213ENST00000510187 ZNF672Q499Z4 452 aaPredicted RBP13.28□□□□□ -0.28
SQSTM1-213ENST00000510187 H2BFWTQ7Z2G1 175 aa13.28□□□□□ -0.28
SQSTM1-213ENST00000510187 FAM90A1Q86YD7 464 aa13.28□□□□□ -0.28
SQSTM1-213ENST00000510187 RPP25LQ8N5L8 163 aaKnown RBP13.28□□□□□ -0.28
SQSTM1-213ENST00000510187 OR2Z1Q8NG97 314 aa13.28□□□□□ -0.28
SQSTM1-213ENST00000510187 OR51M1Q9H341 326 aa13.28□□□□□ -0.28
SQSTM1-213ENST00000510187 MANBALQ9NQG1 85 aa13.28□□□□□ -0.28
SQSTM1-213ENST00000510187 ROS1P08922 2347 aa13.28□□□□□ -0.28
SQSTM1-213ENST00000510187 TGIF2-C20orf24A0A0A6YYL0 155 aa13.27□□□□□ -0.28
SQSTM1-213ENST00000510187 IGHV3-64DA0A0J9YX35 117 aa13.27□□□□□ -0.28
SQSTM1-213ENST00000510187 SPINT2O43291 252 aa13.27□□□□□ -0.28
SQSTM1-213ENST00000510187 SOX15O60248 233 aa13.27□□□□□ -0.28
SQSTM1-213ENST00000510187 PTBP3O95758 552 aaKnown RBP13.27□□□□□ -0.28
SQSTM1-213ENST00000510187 FABP1P07148 127 aa13.27□□□□□ -0.28
SQSTM1-213ENST00000510187 BRWD1-AS2P59051 145 aa13.27□□□□□ -0.28
SQSTM1-213ENST00000510187 GNB2P62879 340 aa13.27□□□□□ -0.28
SQSTM1-213ENST00000510187 AARDQ4LEZ3 155 aa13.27□□□□□ -0.28
SQSTM1-213ENST00000510187 PRAMEF6Q5VXH4 476 aa13.27□□□□□ -0.28
SQSTM1-213ENST00000510187 WDR25Q64LD2 544 aaPredicted RBP13.27□□□□□ -0.28
SQSTM1-213ENST00000510187 CYP2G1PQ6ZSU1 146 aa13.27□□□□□ -0.28
SQSTM1-213ENST00000510187 EDARADDQ8WWZ3 215 aa13.27□□□□□ -0.28
SQSTM1-213ENST00000510187 NIT2Q9NQR4 276 aa13.27□□□□□ -0.28
SQSTM1-213ENST00000510187 NAT8Q9UHE5 227 aa13.27□□□□□ -0.28
SQSTM1-213ENST00000510187 TRBV24-1A0A075B6N3 115 aa13.27□□□□□ -0.29
SQSTM1-213ENST00000510187 FGF7P21781 194 aa13.27□□□□□ -0.29
SQSTM1-213ENST00000510187 S100PP25815 95 aa13.27□□□□□ -0.29
SQSTM1-213ENST00000510187 MEF2BQ02080 365 aaPredicted RBP13.27□□□□□ -0.29
SQSTM1-213ENST00000510187 ACSM6Q6P461 480 aa13.27□□□□□ -0.29
SQSTM1-213ENST00000510187 FAM210BQ96KR6 192 aa13.27□□□□□ -0.29
SQSTM1-213ENST00000510187 ACTR3CQ9C0K3 210 aaPredicted RBP13.27□□□□□ -0.29
SQSTM1-213ENST00000510187 CLN8Q9UBY8 286 aa13.27□□□□□ -0.29
SQSTM1-213ENST00000510187 URGCP-MRPS24S4R325 110 aa13.27□□□□□ -0.29
SQSTM1-213ENST00000510187 ELOA3CA0A087WX78 387 aaPredicted RBP13.26□□□□□ -0.29
SQSTM1-213ENST00000510187 C15orf65H3BRN8 121 aa13.26□□□□□ -0.29
SQSTM1-213ENST00000510187 CYB5BO43169 146 aa13.26□□□□□ -0.29
SQSTM1-213ENST00000510187 SPRY3O43610 288 aa13.26□□□□□ -0.29
SQSTM1-213ENST00000510187 KBTBD11O94819 623 aa13.26□□□□□ -0.29
SQSTM1-213ENST00000510187 IGKV1D-33P01593 117 aa13.26□□□□□ -0.29
SQSTM1-213ENST00000510187 IGKV1-33P01594 117 aa13.26□□□□□ -0.29
SQSTM1-213ENST00000510187 MDKP21741 143 aaPredicted RBP13.26□□□□□ -0.29
SQSTM1-213ENST00000510187 PSMB3P49720 205 aa13.26□□□□□ -0.29
SQSTM1-213ENST00000510187 OR2B11Q5JQS5 317 aa13.26□□□□□ -0.29
SQSTM1-213ENST00000510187 OR13A1Q8NGR1 328 aa13.26□□□□□ -0.29
SQSTM1-213ENST00000510187 GSN-AS1Q9NRJ2 163 aa13.26□□□□□ -0.29
SQSTM1-213ENST00000510187 DOK5Q9P104 306 aa13.26□□□□□ -0.29
SQSTM1-213ENST00000510187 ICE1Q9Y2F5 2266 aa13.26□□□□□ -0.29
SQSTM1-213ENST00000510187 COL12A1Q99715 3063 aa13.25□□□□□ -0.29
SQSTM1-213ENST00000510187 A6NNC1 897 aa13.25□□□□□ -0.29
SQSTM1-213ENST00000510187 SEC14L6B5MCN3 397 aa13.25□□□□□ -0.29
SQSTM1-213ENST00000510187 C17orf112F2Z3M2 114 aa13.25□□□□□ -0.29
SQSTM1-213ENST00000510187 SSTR5P35346 364 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms