RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 OR2W1Q9Y3N9 320 aa11.74□□□□□ -0.53
TPM3-219ENST00000509409 SLC22A5O76082 557 aa11.73□□□□□ -0.53
TPM3-219ENST00000509409 CSN3P07498 182 aa11.73□□□□□ -0.53
TPM3-219ENST00000509409 SAA1P0DJI8 122 aaPredicted RBP11.73□□□□□ -0.53
TPM3-219ENST00000509409 CD36P16671 472 aa11.73□□□□□ -0.53
TPM3-219ENST00000509409 GNG2P59768 71 aa11.73□□□□□ -0.53
TPM3-219ENST00000509409 CDK10Q15131 360 aa11.73□□□□□ -0.53
TPM3-219ENST00000509409 LCN12Q6JVE5 192 aa11.73□□□□□ -0.53
TPM3-219ENST00000509409 GTSCR1Q86UQ5 136 aa11.73□□□□□ -0.53
TPM3-219ENST00000509409 NR2C2APQ86WQ0 139 aa11.73□□□□□ -0.53
TPM3-219ENST00000509409 MMD2Q8IY49 270 aa11.73□□□□□ -0.53
TPM3-219ENST00000509409 STAB2Q8WWQ8 2551 aa11.73□□□□□ -0.53
TPM3-219ENST00000509409 SPIN2AQ99865 258 aa11.73□□□□□ -0.53
TPM3-219ENST00000509409 SPIN2BQ9BPZ2 258 aa11.73□□□□□ -0.53
TPM3-219ENST00000509409 TM2D3Q9BRN9 247 aa11.73□□□□□ -0.53
TPM3-219ENST00000509409 DCSTAMPQ9H295 470 aa11.73□□□□□ -0.53
TPM3-219ENST00000509409 AKIP1Q9NQ31 210 aa11.73□□□□□ -0.53
TPM3-219ENST00000509409 C19orf73Q9NVV2 129 aa11.73□□□□□ -0.53
TPM3-219ENST00000509409 TXNL4BQ9NX01 149 aaKnown RBP11.73□□□□□ -0.53
TPM3-219ENST00000509409 PEMTQ9UBM1 199 aa11.73□□□□□ -0.53
TPM3-219ENST00000509409 DAPK2Q9UIK4 370 aa11.73□□□□□ -0.53
TPM3-219ENST00000509409 SSR3Q9UNL2 185 aa11.73□□□□□ -0.53
TPM3-219ENST00000509409 MRPS7Q9Y2R9 242 aaKnown RBP11.73□□□□□ -0.53
TPM3-219ENST00000509409 RBMX2Q9Y388 322 aaKnown RBP11.73□□□□□ -0.53
TPM3-219ENST00000509409 TMEM235A6NFC5 223 aa11.72□□□□□ -0.53
TPM3-219ENST00000509409 FAM223BA6NKX1 122 aa11.72□□□□□ -0.53
TPM3-219ENST00000509409 A8MZ25 164 aa11.72□□□□□ -0.53
TPM3-219ENST00000509409 MRPS14O60783 128 aaKnown RBP11.72□□□□□ -0.53
TPM3-219ENST00000509409 RBMXL2O75526 392 aaKnown RBP11.72□□□□□ -0.53
TPM3-219ENST00000509409 HLA-DQB1P01920 261 aa11.72□□□□□ -0.53
TPM3-219ENST00000509409 GABARAPL2P60520 117 aa11.72□□□□□ -0.53
TPM3-219ENST00000509409 EXOSC2Q13868 293 aaKnown RBP11.72□□□□□ -0.53
TPM3-219ENST00000509409 CNIH2Q6PI25 160 aa11.72□□□□□ -0.53
TPM3-219ENST00000509409 KCTD9Q7L273 389 aa11.72□□□□□ -0.53
TPM3-219ENST00000509409 SLC25A42Q86VD7 318 aa11.72□□□□□ -0.53
TPM3-219ENST00000509409 FAM223AQ8IWN6 122 aa11.72□□□□□ -0.53
TPM3-219ENST00000509409 Q8N402 240 aa11.72□□□□□ -0.53
TPM3-219ENST00000509409 NUDCD2Q8WVJ2 157 aa11.72□□□□□ -0.53
TPM3-219ENST00000509409 TCTEX1D2Q8WW35 142 aa11.72□□□□□ -0.53
TPM3-219ENST00000509409 CITED4Q96RK1 184 aa11.72□□□□□ -0.53
TPM3-219ENST00000509409 RRP15Q9Y3B9 282 aaKnown RBP11.72□□□□□ -0.53
TPM3-219ENST00000509409 DPPA5A6NC42 116 aa11.71□□□□□ -0.53
TPM3-219ENST00000509409 SCGNO76038 276 aa11.71□□□□□ -0.53
TPM3-219ENST00000509409 OR2A4O95047 310 aa11.71□□□□□ -0.53
TPM3-219ENST00000509409 RPL30P62888 115 aaKnown RBP11.71□□□□□ -0.53
TPM3-219ENST00000509409 UBE2UQ5VVX9 321 aa11.71□□□□□ -0.53
TPM3-219ENST00000509409 ZFAND6Q6FIF0 208 aa11.71□□□□□ -0.53
TPM3-219ENST00000509409 TPRA1Q86W33 373 aa11.71□□□□□ -0.53
TPM3-219ENST00000509409 VKORC1L1Q8N0U8 176 aa11.71□□□□□ -0.53
TPM3-219ENST00000509409 SPARTQ8N0X7 666 aa11.71□□□□□ -0.53
TPM3-219ENST00000509409 TTC9CQ8N5M4 171 aa11.71□□□□□ -0.53
TPM3-219ENST00000509409 OR51E2Q9H255 320 aa11.71□□□□□ -0.53
TPM3-219ENST00000509409 SIGLEC8Q9NYZ4 499 aa11.71□□□□□ -0.53
TPM3-219ENST00000509409 SPATA2Q9UM82 520 aa11.71□□□□□ -0.53
TPM3-219ENST00000509409 IZUMO1RA6ND01 250 aa11.7□□□□□ -0.54
TPM3-219ENST00000509409 HMX3A6NHT5 357 aa11.7□□□□□ -0.54
TPM3-219ENST00000509409 AIREO43918 545 aa11.7□□□□□ -0.54
TPM3-219ENST00000509409 OR2J3O76001 311 aa11.7□□□□□ -0.54
TPM3-219ENST00000509409 IFNA6P05013 189 aa11.7□□□□□ -0.54
TPM3-219ENST00000509409 FGF9P31371 208 aaPredicted RBP11.7□□□□□ -0.54
TPM3-219ENST00000509409 ZNF45Q02386 682 aa11.7□□□□□ -0.54
TPM3-219ENST00000509409 HAGHQ16775 308 aa11.7□□□□□ -0.54
TPM3-219ENST00000509409 C10orf55Q5SWW7 151 aa11.7□□□□□ -0.54
TPM3-219ENST00000509409 OR4S2Q8NH73 311 aa11.7□□□□□ -0.54
TPM3-219ENST00000509409 FYTTD1Q96QD9 318 aaKnown RBP11.7□□□□□ -0.54
TPM3-219ENST00000509409 OR2A7Q96R45 310 aa11.7□□□□□ -0.54
TPM3-219ENST00000509409 HSD17B10Q99714 261 aaKnown RBP11.7□□□□□ -0.54
TPM3-219ENST00000509409 SPATA25Q9BR10 227 aa11.7□□□□□ -0.54
TPM3-219ENST00000509409 ANXA10Q9UJ72 324 aa11.7□□□□□ -0.54
TPM3-219ENST00000509409 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.69□□□□□ -0.54
TPM3-219ENST00000509409 TRBV9A0A0B4J1U6 114 aa11.69□□□□□ -0.54
TPM3-219ENST00000509409 IGKV1D-13A0A0B4J2D9 117 aa11.69□□□□□ -0.54
TPM3-219ENST00000509409 BMPR1BO00238 502 aa11.69□□□□□ -0.54
TPM3-219ENST00000509409 IGKV1-13P0DP09 117 aa11.69□□□□□ -0.54
TPM3-219ENST00000509409 RPL27AP46776 148 aaKnown RBP11.69□□□□□ -0.54
TPM3-219ENST00000509409 ARPC4P59998 168 aa11.69□□□□□ -0.54
TPM3-219ENST00000509409 MFSD4AQ8N468 514 aa11.69□□□□□ -0.54
TPM3-219ENST00000509409 NECAP1Q8NC96 275 aa11.69□□□□□ -0.54
TPM3-219ENST00000509409 OR2K2Q8NGT1 345 aa11.69□□□□□ -0.54
TPM3-219ENST00000509409 VSTM2AQ8TAG5 236 aa11.69□□□□□ -0.54
TPM3-219ENST00000509409 DYNLRB2Q8TF09 96 aa11.69□□□□□ -0.54
TPM3-219ENST00000509409 FCGR1BQ92637 280 aa11.69□□□□□ -0.54
TPM3-219ENST00000509409 ISOC1Q96CN7 298 aa11.69□□□□□ -0.54
TPM3-219ENST00000509409 Q9H521 79 aa11.69□□□□□ -0.54
TPM3-219ENST00000509409 SDC2P34741 201 aa11.68□□□□□ -0.54
TPM3-219ENST00000509409 MXD1Q05195 221 aa11.68□□□□□ -0.54
TPM3-219ENST00000509409 C15orf32Q32M92 178 aa11.68□□□□□ -0.54
TPM3-219ENST00000509409 SFXN4Q6P4A7 337 aa11.68□□□□□ -0.54
TPM3-219ENST00000509409 SSX9Q7RTT3 188 aa11.68□□□□□ -0.54
TPM3-219ENST00000509409 LGALS14Q8TCE9 139 aa11.68□□□□□ -0.54
TPM3-219ENST00000509409 KCTD12Q96CX2 325 aaKnown RBP11.68□□□□□ -0.54
TPM3-219ENST00000509409 RHBDL2Q9NX52 303 aa11.68□□□□□ -0.54
TPM3-219ENST00000509409 TAS2R8Q9NYW2 309 aa11.68□□□□□ -0.54
TPM3-219ENST00000509409 FBXL7Q9UJT9 491 aa11.68□□□□□ -0.54
TPM3-219ENST00000509409 TRAV18A0A075B6X5 111 aa11.67□□□□□ -0.54
TPM3-219ENST00000509409 PPP5D1E7EU14 171 aa11.67□□□□□ -0.54
TPM3-219ENST00000509409 SSX5O60225 188 aa11.67□□□□□ -0.54
TPM3-219ENST00000509409 GGCTO75223 188 aaKnown RBP11.67□□□□□ -0.54
TPM3-219ENST00000509409 KBTBD11O94819 623 aa11.67□□□□□ -0.54
TPM3-219ENST00000509409 HRASP01112 189 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms