RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 SNAPC3Q92966 411 aa9.53□□□□□ -0.88
PDPN-208ENST00000509009 DCUN1D5Q9BTE7 237 aa9.53□□□□□ -0.88
PDPN-208ENST00000509009 YTHDF1Q9BYJ9 559 aaKnown RBP9.53□□□□□ -0.88
PDPN-208ENST00000509009 ZMAT4Q9H898 229 aa9.53□□□□□ -0.88
PDPN-208ENST00000509009 ZNF430Q9H8G1 570 aaPredicted RBP9.53□□□□□ -0.88
PDPN-208ENST00000509009 AKIP1Q9NQ31 210 aa9.53□□□□□ -0.88
PDPN-208ENST00000509009 DAPK2Q9UIK4 370 aa9.53□□□□□ -0.88
PDPN-208ENST00000509009 SSR3Q9UNL2 185 aa9.53□□□□□ -0.88
PDPN-208ENST00000509009 RBMX2Q9Y388 322 aaKnown RBP9.53□□□□□ -0.88
PDPN-208ENST00000509009 RRP15Q9Y3B9 282 aaKnown RBP9.53□□□□□ -0.88
PDPN-208ENST00000509009 TRBV9A0A0B4J1U6 114 aa9.52□□□□□ -0.89
PDPN-208ENST00000509009 H0Y980 276 aa9.52□□□□□ -0.89
PDPN-208ENST00000509009 TUSC2O75896 110 aa9.52□□□□□ -0.89
PDPN-208ENST00000509009 SLC22A5O76082 557 aa9.52□□□□□ -0.89
PDPN-208ENST00000509009 PRH1P02810 166 aa9.52□□□□□ -0.89
PDPN-208ENST00000509009 SAA1P0DJI8 122 aaPredicted RBP9.52□□□□□ -0.89
PDPN-208ENST00000509009 MECP2P51608 486 aaKnown RBP9.52□□□□□ -0.89
PDPN-208ENST00000509009 BRWD1-AS2P59051 145 aa9.52□□□□□ -0.89
PDPN-208ENST00000509009 RHOGP84095 191 aa9.52□□□□□ -0.89
PDPN-208ENST00000509009 ZNF45Q02386 682 aa9.52□□□□□ -0.89
PDPN-208ENST00000509009 ATP5G2Q06055 141 aa9.52□□□□□ -0.89
PDPN-208ENST00000509009 CDK10Q15131 360 aa9.52□□□□□ -0.89
PDPN-208ENST00000509009 MMD2Q8IY49 270 aa9.52□□□□□ -0.89
PDPN-208ENST00000509009 TTC9CQ8N5M4 171 aa9.52□□□□□ -0.89
PDPN-208ENST00000509009 ACOT12Q8WYK0 555 aa9.52□□□□□ -0.89
PDPN-208ENST00000509009 TM2D3Q9BRN9 247 aa9.52□□□□□ -0.89
PDPN-208ENST00000509009 OR51E2Q9H255 320 aa9.52□□□□□ -0.89
PDPN-208ENST00000509009 SIGLEC8Q9NYZ4 499 aa9.52□□□□□ -0.89
PDPN-208ENST00000509009 ANXA10Q9UJ72 324 aa9.52□□□□□ -0.89
PDPN-208ENST00000509009 PRELID3BQ9Y3B1 194 aa9.52□□□□□ -0.89
PDPN-208ENST00000509009 MPPED1O15442 326 aa9.51□□□□□ -0.89
PDPN-208ENST00000509009 SCGNO76038 276 aa9.51□□□□□ -0.89
PDPN-208ENST00000509009 ACTL6BO94805 426 aa9.51□□□□□ -0.89
PDPN-208ENST00000509009 ATP6V1G2O95670 118 aa9.51□□□□□ -0.89
PDPN-208ENST00000509009 CLEC2LP0C7M8 214 aa9.51□□□□□ -0.89
PDPN-208ENST00000509009 SDC2P34741 201 aa9.51□□□□□ -0.89
PDPN-208ENST00000509009 GNG2P59768 71 aa9.51□□□□□ -0.89
PDPN-208ENST00000509009 EIF4EBP1Q13541 118 aaPredicted RBP9.51□□□□□ -0.89
PDPN-208ENST00000509009 RPEL1Q2QD12 228 aa9.51□□□□□ -0.89
PDPN-208ENST00000509009 C10orf55Q5SWW7 151 aa9.51□□□□□ -0.89
PDPN-208ENST00000509009 CASC10Q5T4H9 136 aa9.51□□□□□ -0.89
PDPN-208ENST00000509009 SFXN4Q6P4A7 337 aa9.51□□□□□ -0.89
PDPN-208ENST00000509009 VKORC1L1Q8N0U8 176 aa9.51□□□□□ -0.89
PDPN-208ENST00000509009 MFSD4AQ8N468 514 aa9.51□□□□□ -0.89
PDPN-208ENST00000509009 FCGR1BQ92637 280 aa9.51□□□□□ -0.89
PDPN-208ENST00000509009 HSD17B10Q99714 261 aaKnown RBP9.51□□□□□ -0.89
PDPN-208ENST00000509009 SPIN2AQ99865 258 aa9.51□□□□□ -0.89
PDPN-208ENST00000509009 SPIN2BQ9BPZ2 258 aa9.51□□□□□ -0.89
PDPN-208ENST00000509009 THAP7Q9BT49 309 aaPredicted RBP9.51□□□□□ -0.89
PDPN-208ENST00000509009 IZUMO1RA6ND01 250 aa9.5□□□□□ -0.89
PDPN-208ENST00000509009 FAM223BA6NKX1 122 aa9.5□□□□□ -0.89
PDPN-208ENST00000509009 BMPR1BO00238 502 aa9.5□□□□□ -0.89
PDPN-208ENST00000509009 CREBL2O60519 120 aaPredicted RBP9.5□□□□□ -0.89
PDPN-208ENST00000509009 IL6RP08887 468 aaPredicted RBP9.5□□□□□ -0.89
PDPN-208ENST00000509009 CD36P16671 472 aa9.5□□□□□ -0.89
PDPN-208ENST00000509009 OR2B11Q5JQS5 317 aa9.5□□□□□ -0.89
PDPN-208ENST00000509009 KCTD9Q7L273 389 aa9.5□□□□□ -0.89
PDPN-208ENST00000509009 FAM223AQ8IWN6 122 aa9.5□□□□□ -0.89
PDPN-208ENST00000509009 SGPP2Q8IWX5 399 aa9.5□□□□□ -0.89
PDPN-208ENST00000509009 NECAP1Q8NC96 275 aa9.5□□□□□ -0.89
PDPN-208ENST00000509009 OR5H6Q8NGV6 325 aa9.5□□□□□ -0.89
PDPN-208ENST00000509009 LGALS14Q8TCE9 139 aa9.5□□□□□ -0.89
PDPN-208ENST00000509009 RNF167Q9H6Y7 350 aa9.5□□□□□ -0.89
PDPN-208ENST00000509009 RHBDL2Q9NX52 303 aa9.5□□□□□ -0.89
PDPN-208ENST00000509009 MRPS7Q9Y2R9 242 aaKnown RBP9.5□□□□□ -0.89
PDPN-208ENST00000509009 TRAV18A0A075B6X5 111 aa9.49□□□□□ -0.89
PDPN-208ENST00000509009 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.49□□□□□ -0.89
PDPN-208ENST00000509009 HMX3A6NHT5 357 aa9.49□□□□□ -0.89
PDPN-208ENST00000509009 TEX22C9J3V5 150 aa9.49□□□□□ -0.89
PDPN-208ENST00000509009 E7EUB6 86 aa9.49□□□□□ -0.89
PDPN-208ENST00000509009 OR2A4O95047 310 aa9.49□□□□□ -0.89
PDPN-208ENST00000509009 MXD1Q05195 221 aa9.49□□□□□ -0.89
PDPN-208ENST00000509009 EXOSC2Q13868 293 aaKnown RBP9.49□□□□□ -0.89
PDPN-208ENST00000509009 ZNF773Q6PK81 442 aa9.49□□□□□ -0.89
PDPN-208ENST00000509009 ADAMTSL5Q6ZMM2 481 aa9.49□□□□□ -0.89
PDPN-208ENST00000509009 SLC25A42Q86VD7 318 aa9.49□□□□□ -0.89
PDPN-208ENST00000509009 PUSL1Q8N0Z8 303 aaKnown RBP9.49□□□□□ -0.89
PDPN-208ENST00000509009 TMEM167AQ8TBQ9 72 aa9.49□□□□□ -0.89
PDPN-208ENST00000509009 OR2A7Q96R45 310 aa9.49□□□□□ -0.89
PDPN-208ENST00000509009 CITED4Q96RK1 184 aa9.49□□□□□ -0.89
PDPN-208ENST00000509009 GPHA2Q96T91 129 aa9.49□□□□□ -0.89
PDPN-208ENST00000509009 Q9H521 79 aa9.49□□□□□ -0.89
PDPN-208ENST00000509009 SPATA2Q9UM82 520 aa9.49□□□□□ -0.89
PDPN-208ENST00000509009 DMRT1Q9Y5R6 373 aa9.49□□□□□ -0.89
PDPN-208ENST00000509009 A0A1B0GW64 132 aa9.48□□□□□ -0.89
PDPN-208ENST00000509009 AIREO43918 545 aa9.48□□□□□ -0.89
PDPN-208ENST00000509009 OR2J3O76001 311 aa9.48□□□□□ -0.89
PDPN-208ENST00000509009 PTHLHP12272 177 aa9.48□□□□□ -0.89
PDPN-208ENST00000509009 LYL1P12980 280 aa9.48□□□□□ -0.89
PDPN-208ENST00000509009 SCAND1P57086 179 aa9.48□□□□□ -0.89
PDPN-208ENST00000509009 HAGHQ16775 308 aa9.48□□□□□ -0.89
PDPN-208ENST00000509009 IDNKQ5T6J7 187 aa9.48□□□□□ -0.89
PDPN-208ENST00000509009 LCN12Q6JVE5 192 aa9.48□□□□□ -0.89
PDPN-208ENST00000509009 ZNF66Q6ZN08 573 aa9.48□□□□□ -0.89
PDPN-208ENST00000509009 HOGA1Q86XE5 327 aa9.48□□□□□ -0.89
PDPN-208ENST00000509009 Q8N402 240 aa9.48□□□□□ -0.89
PDPN-208ENST00000509009 GVQW1Q8N7I0 195 aa9.48□□□□□ -0.89
PDPN-208ENST00000509009 BEST4Q8NFU0 473 aa9.48□□□□□ -0.89
PDPN-208ENST00000509009 OR4S2Q8NH73 311 aa9.48□□□□□ -0.89
PDPN-208ENST00000509009 TCTEX1D2Q8WW35 142 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms