RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 SAA1P0DJI8 122 aaPredicted RBP6.98□□□□□ -1.29
PDLIM5-209ENST00000506632 CD40LGP29965 261 aa6.98□□□□□ -1.29
PDLIM5-209ENST00000506632 ECI1P42126 302 aa6.98□□□□□ -1.29
PDLIM5-209ENST00000506632 BRWD1-AS2P59051 145 aa6.98□□□□□ -1.29
PDLIM5-209ENST00000506632 RPL30P62888 115 aaKnown RBP6.98□□□□□ -1.29
PDLIM5-209ENST00000506632 CD69Q07108 199 aa6.98□□□□□ -1.29
PDLIM5-209ENST00000506632 VMA21Q3ZAQ7 101 aa6.98□□□□□ -1.29
PDLIM5-209ENST00000506632 VAX1Q5SQQ9 334 aa6.98□□□□□ -1.29
PDLIM5-209ENST00000506632 ACSM6Q6P461 480 aa6.98□□□□□ -1.29
PDLIM5-209ENST00000506632 ZNF429Q86V71 674 aa6.98□□□□□ -1.29
PDLIM5-209ENST00000506632 BEST4Q8NFU0 473 aa6.98□□□□□ -1.29
PDLIM5-209ENST00000506632 YIPF6Q96EC8 236 aa6.98□□□□□ -1.29
PDLIM5-209ENST00000506632 TINAGL1Q9GZM7 467 aaPredicted RBP6.98□□□□□ -1.29
PDLIM5-209ENST00000506632 AUNIPQ9H7T9 357 aa6.98□□□□□ -1.29
PDLIM5-209ENST00000506632 ZNF256Q9Y2P7 627 aaPredicted RBP6.98□□□□□ -1.29
PDLIM5-209ENST00000506632 STAB2Q8WWQ8 2551 aa6.98□□□□□ -1.29
PDLIM5-209ENST00000506632 TENM3Q9P273 2699 aa6.97□□□□□ -1.29
PDLIM5-209ENST00000506632 TRAV18A0A075B6X5 111 aa6.97□□□□□ -1.29
PDLIM5-209ENST00000506632 TRIM64CA6NLI5 447 aa6.97□□□□□ -1.29
PDLIM5-209ENST00000506632 J3QRK9 145 aa6.97□□□□□ -1.29
PDLIM5-209ENST00000506632 AADACP22760 399 aa6.97□□□□□ -1.29
PDLIM5-209ENST00000506632 TGFBR1P36897 503 aa6.97□□□□□ -1.29
PDLIM5-209ENST00000506632 SUMO1P63165 101 aaKnown RBP6.97□□□□□ -1.29
PDLIM5-209ENST00000506632 CDK10Q15131 360 aa6.97□□□□□ -1.29
PDLIM5-209ENST00000506632 MSMO1Q15800 293 aa6.97□□□□□ -1.29
PDLIM5-209ENST00000506632 TIMM50Q3ZCQ8 353 aa6.97□□□□□ -1.29
PDLIM5-209ENST00000506632 IDO2Q6ZQW0 420 aa6.97□□□□□ -1.29
PDLIM5-209ENST00000506632 KCTD9Q7L273 389 aa6.97□□□□□ -1.29
PDLIM5-209ENST00000506632 HOGA1Q86XE5 327 aa6.97□□□□□ -1.29
PDLIM5-209ENST00000506632 GVQW1Q8N7I0 195 aa6.97□□□□□ -1.29
PDLIM5-209ENST00000506632 ADAD2Q8NCV1 583 aaKnown RBP6.97□□□□□ -1.29
PDLIM5-209ENST00000506632 OR5T1Q8NG75 326 aa6.97□□□□□ -1.29
PDLIM5-209ENST00000506632 SRSF12Q8WXF0 261 aaKnown RBP6.97□□□□□ -1.29
PDLIM5-209ENST00000506632 HSD17B10Q99714 261 aaKnown RBP6.97□□□□□ -1.29
PDLIM5-209ENST00000506632 ZNF430Q9H8G1 570 aaPredicted RBP6.97□□□□□ -1.29
PDLIM5-209ENST00000506632 PRELID3BQ9Y3B1 194 aa6.97□□□□□ -1.29
PDLIM5-209ENST00000506632 A0A087WXM4 84 aa6.96□□□□□ -1.3
PDLIM5-209ENST00000506632 A0A0G2JLM5 398 aa6.96□□□□□ -1.3
PDLIM5-209ENST00000506632 MSGN1A6NI15 193 aa6.96□□□□□ -1.3
PDLIM5-209ENST00000506632 FCGR3BO75015 233 aa6.96□□□□□ -1.3
PDLIM5-209ENST00000506632 SAP30O75446 220 aa6.96□□□□□ -1.3
PDLIM5-209ENST00000506632 RBMXL2O75526 392 aaKnown RBP6.96□□□□□ -1.3
PDLIM5-209ENST00000506632 TNFAIP8O95379 198 aa6.96□□□□□ -1.3
PDLIM5-209ENST00000506632 PTHLHP12272 177 aa6.96□□□□□ -1.3
PDLIM5-209ENST00000506632 RPS19P39019 145 aaKnown RBP6.96□□□□□ -1.3
PDLIM5-209ENST00000506632 DYRK1AQ13627 763 aa6.96□□□□□ -1.3
PDLIM5-209ENST00000506632 TNXAQ16473 311 aa6.96□□□□□ -1.3
PDLIM5-209ENST00000506632 ZNF343Q6P1L6 599 aa6.96□□□□□ -1.3
PDLIM5-209ENST00000506632 ZNF66Q6ZN08 573 aa6.96□□□□□ -1.3
PDLIM5-209ENST00000506632 CROCCP3Q8IVE0 287 aa6.96□□□□□ -1.3
PDLIM5-209ENST00000506632 PUSL1Q8N0Z8 303 aaKnown RBP6.96□□□□□ -1.3
PDLIM5-209ENST00000506632 MFSD4AQ8N468 514 aa6.96□□□□□ -1.3
PDLIM5-209ENST00000506632 TSPAN14Q8NG11 270 aa6.96□□□□□ -1.3
PDLIM5-209ENST00000506632 SNAPC3Q92966 411 aa6.96□□□□□ -1.3
PDLIM5-209ENST00000506632 RANGRFQ9HD47 186 aaPredicted RBP6.96□□□□□ -1.3
PDLIM5-209ENST00000506632 DIABLOQ9NR28 239 aa6.96□□□□□ -1.3
PDLIM5-209ENST00000506632 ZNF355PQ9NSJ1 428 aa6.96□□□□□ -1.3
PDLIM5-209ENST00000506632 ANAPC10Q9UM13 185 aa6.96□□□□□ -1.3
PDLIM5-209ENST00000506632 MRPS7Q9Y2R9 242 aaKnown RBP6.96□□□□□ -1.3
PDLIM5-209ENST00000506632 TRBV9A0A0B4J1U6 114 aa6.95□□□□□ -1.3
PDLIM5-209ENST00000506632 C13orf42A0A1B0GVH6 325 aa6.95□□□□□ -1.3
PDLIM5-209ENST00000506632 XRCC3O43542 346 aa6.95□□□□□ -1.3
PDLIM5-209ENST00000506632 AIREO43918 545 aa6.95□□□□□ -1.3
PDLIM5-209ENST00000506632 CREBL2O60519 120 aaPredicted RBP6.95□□□□□ -1.3
PDLIM5-209ENST00000506632 PPYP01298 95 aa6.95□□□□□ -1.3
PDLIM5-209ENST00000506632 OR9G9P0C7N8 305 aa6.95□□□□□ -1.3
PDLIM5-209ENST00000506632 NHLRC4P0CG21 123 aaPredicted RBP6.95□□□□□ -1.3
PDLIM5-209ENST00000506632 SPNP16150 400 aa6.95□□□□□ -1.3
PDLIM5-209ENST00000506632 ZP3P21754 424 aa6.95□□□□□ -1.3
PDLIM5-209ENST00000506632 FCGR2CP31995 323 aa6.95□□□□□ -1.3
PDLIM5-209ENST00000506632 CBX5P45973 191 aa6.95□□□□□ -1.3
PDLIM5-209ENST00000506632 ARPC4P59998 168 aa6.95□□□□□ -1.3
PDLIM5-209ENST00000506632 DEFA5Q01523 94 aa6.95□□□□□ -1.3
PDLIM5-209ENST00000506632 KLF5Q13887 457 aaPredicted RBP6.95□□□□□ -1.3
PDLIM5-209ENST00000506632 OR2B11Q5JQS5 317 aa6.95□□□□□ -1.3
PDLIM5-209ENST00000506632 C10orf55Q5SWW7 151 aa6.95□□□□□ -1.3
PDLIM5-209ENST00000506632 MMD2Q8IY49 270 aa6.95□□□□□ -1.3
PDLIM5-209ENST00000506632 OR4S2Q8NH73 311 aa6.95□□□□□ -1.3
PDLIM5-209ENST00000506632 TMEM167AQ8TBQ9 72 aa6.95□□□□□ -1.3
PDLIM5-209ENST00000506632 TCTEX1D2Q8WW35 142 aa6.95□□□□□ -1.3
PDLIM5-209ENST00000506632 GIMAP1Q8WWP7 306 aa6.95□□□□□ -1.3
PDLIM5-209ENST00000506632 USMG5Q96IX5 58 aa6.95□□□□□ -1.3
PDLIM5-209ENST00000506632 A0A1B0GW64 132 aa6.94□□□□□ -1.3
PDLIM5-209ENST00000506632 TEX22C9J3V5 150 aa6.94□□□□□ -1.3
PDLIM5-209ENST00000506632 RGS13O14921 159 aa6.94□□□□□ -1.3
PDLIM5-209ENST00000506632 RBFOX2O43251 390 aaKnown RBP eCLIP6.94□□□□□ -1.3
PDLIM5-209ENST00000506632 KBTBD11O94819 623 aa6.94□□□□□ -1.3
PDLIM5-209ENST00000506632 OR2A4O95047 310 aa6.94□□□□□ -1.3
PDLIM5-209ENST00000506632 IGLV1-51P01701 117 aa6.94□□□□□ -1.3
PDLIM5-209ENST00000506632 TRBV12-3P01733 135 aa6.94□□□□□ -1.3
PDLIM5-209ENST00000506632 APELAP0DMC3 54 aa6.94□□□□□ -1.3
PDLIM5-209ENST00000506632 SMCPP49901 116 aaPredicted RBP6.94□□□□□ -1.3
PDLIM5-209ENST00000506632 LSM3P62310 102 aaKnown RBP6.94□□□□□ -1.3
PDLIM5-209ENST00000506632 ZNF45Q02386 682 aa6.94□□□□□ -1.3
PDLIM5-209ENST00000506632 UBE2NLQ5JXB2 153 aa6.94□□□□□ -1.3
PDLIM5-209ENST00000506632 IL34Q6ZMJ4 242 aa6.94□□□□□ -1.3
PDLIM5-209ENST00000506632 VKORC1L1Q8N0U8 176 aa6.94□□□□□ -1.3
PDLIM5-209ENST00000506632 TTC9CQ8N5M4 171 aa6.94□□□□□ -1.3
PDLIM5-209ENST00000506632 ZBTB34Q8NCN2 500 aa6.94□□□□□ -1.3
PDLIM5-209ENST00000506632 OR5AP2Q8NGF4 316 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms