RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 UNC13CQ8NB66 2214 aa2.19□□□□□ -2.06
SMC4-224ENST00000494612 PDZD2O15018 2839 aa2.19□□□□□ -2.06
SMC4-224ENST00000494612 TLN1Q9Y490 2541 aaKnown RBP2.19□□□□□ -2.06
SMC4-224ENST00000494612 SPTBN1Q01082 2364 aaKnown RBP2.18□□□□□ -2.06
SMC4-224ENST00000494612 DYSFO75923 2080 aa2.18□□□□□ -2.06
SMC4-224ENST00000494612 PVALEFA0A1B0GWK0 134 aa2.18□□□□□ -2.06
SMC4-224ENST00000494612 C21orf140B9A014 251 aa2.18□□□□□ -2.06
SMC4-224ENST00000494612 GOLGA8KD6RF30 607 aa2.18□□□□□ -2.06
SMC4-224ENST00000494612 GOLGA8MH3BSY2 632 aa2.18□□□□□ -2.06
SMC4-224ENST00000494612 J3QLI3 93 aa2.18□□□□□ -2.06
SMC4-224ENST00000494612 IGHG2P01859 326 aa2.18□□□□□ -2.06
SMC4-224ENST00000494612 S100A6P06703 90 aa2.18□□□□□ -2.06
SMC4-224ENST00000494612 PAEPP09466 180 aa2.18□□□□□ -2.06
SMC4-224ENST00000494612 P0C880 135 aa2.18□□□□□ -2.06
SMC4-224ENST00000494612 M6PRP20645 277 aa2.18□□□□□ -2.06
SMC4-224ENST00000494612 PRPS1L1P21108 318 aa2.18□□□□□ -2.06
SMC4-224ENST00000494612 PSMB9P28065 219 aa2.18□□□□□ -2.06
SMC4-224ENST00000494612 CASP1P29466 404 aa2.18□□□□□ -2.06
SMC4-224ENST00000494612 ACTR1BP42025 376 aa2.18□□□□□ -2.06
SMC4-224ENST00000494612 EMP2P54851 167 aa2.18□□□□□ -2.06
SMC4-224ENST00000494612 GNA12Q03113 381 aa2.18□□□□□ -2.06
SMC4-224ENST00000494612 BIKQ13323 160 aa2.18□□□□□ -2.06
SMC4-224ENST00000494612 CEACAM16Q2WEN9 425 aa2.18□□□□□ -2.06
SMC4-224ENST00000494612 BRMS1LQ5PSV4 323 aa2.18□□□□□ -2.06
SMC4-224ENST00000494612 TIMM23BQ5SRD1 257 aa2.18□□□□□ -2.06
SMC4-224ENST00000494612 FAM104BQ5XKR9 115 aa2.18□□□□□ -2.06
SMC4-224ENST00000494612 ZNF660Q6AZW8 331 aaPredicted RBP2.18□□□□□ -2.06
SMC4-224ENST00000494612 NIPAL1Q6NVV3 410 aa2.18□□□□□ -2.06
SMC4-224ENST00000494612 DEFB106AQ8N104 65 aa2.18□□□□□ -2.06
SMC4-224ENST00000494612 FDCSPQ8NFU4 85 aa2.18□□□□□ -2.06
SMC4-224ENST00000494612 OR5H2Q8NGV7 314 aa2.18□□□□□ -2.06
SMC4-224ENST00000494612 FAM45AQ8TCE6 357 aa2.18□□□□□ -2.06
SMC4-224ENST00000494612 DDIT4LQ96D03 193 aa2.18□□□□□ -2.06
SMC4-224ENST00000494612 TVP23CQ96ET8 276 aa2.18□□□□□ -2.06
SMC4-224ENST00000494612 FMC1Q96HJ9 113 aa2.18□□□□□ -2.06
SMC4-224ENST00000494612 FAM210AQ96ND0 272 aa2.18□□□□□ -2.06
SMC4-224ENST00000494612 OR2V2Q96R30 315 aa2.18□□□□□ -2.06
SMC4-224ENST00000494612 THTPAQ9BU02 230 aa2.18□□□□□ -2.06
SMC4-224ENST00000494612 SLC19A3Q9BZV2 496 aa2.18□□□□□ -2.06
SMC4-224ENST00000494612 TRIM45Q9H8W5 580 aaPredicted RBP2.18□□□□□ -2.06
SMC4-224ENST00000494612 IMP3Q9NV31 184 aaKnown RBP2.18□□□□□ -2.06
SMC4-224ENST00000494612 ZNF230Q9UIE0 474 aaPredicted RBP2.18□□□□□ -2.06
SMC4-224ENST00000494612 SNX10Q9Y5X0 201 aa2.18□□□□□ -2.06
SMC4-224ENST00000494612 NF1P21359 2839 aa2.18□□□□□ -2.06
SMC4-224ENST00000494612 MED13LQ71F56 2210 aa2.18□□□□□ -2.06
SMC4-224ENST00000494612 APCP25054 2843 aa2.18□□□□□ -2.06
SMC4-224ENST00000494612 ITPR3Q14573 2671 aa2.17□□□□□ -2.06
SMC4-224ENST00000494612 CENPEQ02224 2701 aa2.17□□□□□ -2.06
SMC4-224ENST00000494612 FBN3Q75N90 2809 aa2.17□□□□□ -2.06
SMC4-224ENST00000494612 C9J4A7 227 aa2.17□□□□□ -2.06
SMC4-224ENST00000494612 C9JQL5 133 aa2.17□□□□□ -2.06
SMC4-224ENST00000494612 H3BP45 60 aa2.17□□□□□ -2.06
SMC4-224ENST00000494612 ISLRO14498 428 aa2.17□□□□□ -2.06
SMC4-224ENST00000494612 ATP8B1O43520 1251 aa2.17□□□□□ -2.06
SMC4-224ENST00000494612 COX7A2P2O60397 106 aa2.17□□□□□ -2.06
SMC4-224ENST00000494612 FSTL3O95633 263 aa2.17□□□□□ -2.06
SMC4-224ENST00000494612 ORM1P02763 201 aa2.17□□□□□ -2.06
SMC4-224ENST00000494612 TRGV3P03979 118 aa2.17□□□□□ -2.06
SMC4-224ENST00000494612 HRES1P13985 223 aa2.17□□□□□ -2.06
SMC4-224ENST00000494612 TSPOP30536 169 aa2.17□□□□□ -2.06
SMC4-224ENST00000494612 NUDT2P50583 147 aa2.17□□□□□ -2.06
SMC4-224ENST00000494612 BLVRAP53004 296 aa2.17□□□□□ -2.06
SMC4-224ENST00000494612 UBE2IP63279 158 aaKnown RBP2.17□□□□□ -2.06
SMC4-224ENST00000494612 HBG1P69891 147 aa2.17□□□□□ -2.06
SMC4-224ENST00000494612 HBG2P69892 147 aa2.17□□□□□ -2.06
SMC4-224ENST00000494612 PRDX1Q06830 199 aaKnown RBP2.17□□□□□ -2.06
SMC4-224ENST00000494612 SLC9A3R2Q15599 337 aa2.17□□□□□ -2.06
SMC4-224ENST00000494612 DNAL1Q4LDG9 190 aa2.17□□□□□ -2.06
SMC4-224ENST00000494612 PYDC2Q56P42 97 aa2.17□□□□□ -2.06
SMC4-224ENST00000494612 UBE2NLQ5JXB2 153 aa2.17□□□□□ -2.06
SMC4-224ENST00000494612 CDKL4Q5MAI5 379 aa2.17□□□□□ -2.06
SMC4-224ENST00000494612 FAM173BQ6P4H8 233 aa2.17□□□□□ -2.06
SMC4-224ENST00000494612 FAM183BPQ6ZVS7 135 aa2.17□□□□□ -2.06
SMC4-224ENST00000494612 OR8S1Q8NH09 359 aa2.17□□□□□ -2.06
SMC4-224ENST00000494612 SLC37A2Q8TED4 501 aa2.17□□□□□ -2.06
SMC4-224ENST00000494612 BIRC8Q96P09 236 aa2.17□□□□□ -2.06
SMC4-224ENST00000494612 PITX2Q99697 317 aa2.17□□□□□ -2.06
SMC4-224ENST00000494612 FAAP24Q9BTP7 215 aa2.17□□□□□ -2.06
SMC4-224ENST00000494612 ZNF426Q9BUY5 554 aa2.17□□□□□ -2.06
SMC4-224ENST00000494612 ZNF436Q9C0F3 470 aaPredicted RBP2.17□□□□□ -2.06
SMC4-224ENST00000494612 SLC25A31Q9H0C2 315 aa2.17□□□□□ -2.06
SMC4-224ENST00000494612 FBXL15Q9H469 300 aa2.17□□□□□ -2.06
SMC4-224ENST00000494612 METTL17Q9H7H0 456 aaPredicted RBP2.17□□□□□ -2.06
SMC4-224ENST00000494612 RBM12B-AS1Q9P1G2 102 aa2.17□□□□□ -2.06
SMC4-224ENST00000494612 F8P00451 2351 aa2.17□□□□□ -2.06
SMC4-224ENST00000494612 ZNF469Q96JG9 3925 aaPredicted RBP2.17□□□□□ -2.06
SMC4-224ENST00000494612 VPS13CQ709C8 3753 aa2.16□□□□□ -2.06
SMC4-224ENST00000494612 NBASA2RRP1 2371 aa2.16□□□□□ -2.06
SMC4-224ENST00000494612 SEC16AO15027 2179 aa2.16□□□□□ -2.06
SMC4-224ENST00000494612 CXorf51AA0A1B0GTR3 108 aa2.16□□□□□ -2.06
SMC4-224ENST00000494612 EFCAB9A8MZ26 197 aa2.16□□□□□ -2.06
SMC4-224ENST00000494612 UPK1AO00322 258 aa2.16□□□□□ -2.06
SMC4-224ENST00000494612 UPK2O00526 184 aa2.16□□□□□ -2.06
SMC4-224ENST00000494612 KLRC4O43908 158 aa2.16□□□□□ -2.06
SMC4-224ENST00000494612 PSMG1O95456 288 aa2.16□□□□□ -2.06
SMC4-224ENST00000494612 IGLV6-57P01721 117 aa2.16□□□□□ -2.06
SMC4-224ENST00000494612 ATF1P18846 271 aa2.16□□□□□ -2.06
SMC4-224ENST00000494612 COL8A2P25067 703 aa2.16□□□□□ -2.06
SMC4-224ENST00000494612 S100A2P29034 98 aa2.16□□□□□ -2.06
SMC4-224ENST00000494612 IMPA1P29218 277 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms