RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 PSMB9P28065 219 aa6.28□□□□□ -1.4
RIF1-211ENST00000494333 CX3CL1P78423 397 aa6.28□□□□□ -1.4
RIF1-211ENST00000494333 EGFEM1PQ0D2K5 195 aa6.28□□□□□ -1.4
RIF1-211ENST00000494333 IGSF11Q5DX21 431 aa6.28□□□□□ -1.4
RIF1-211ENST00000494333 UBE2UQ5VVX9 321 aa6.28□□□□□ -1.4
RIF1-211ENST00000494333 NR2C2APQ86WQ0 139 aa6.28□□□□□ -1.4
RIF1-211ENST00000494333 OR11H1Q8NG94 326 aa6.28□□□□□ -1.4
RIF1-211ENST00000494333 OR4A4PQ8NGN8 299 aa6.28□□□□□ -1.4
RIF1-211ENST00000494333 C4orf3Q8WVX3 66 aa6.28□□□□□ -1.4
RIF1-211ENST00000494333 UBE2E2Q96LR5 201 aa6.28□□□□□ -1.4
RIF1-211ENST00000494333 CLCC1Q96S66 551 aa6.28□□□□□ -1.4
RIF1-211ENST00000494333 RNF5Q99942 180 aa6.28□□□□□ -1.4
RIF1-211ENST00000494333 GPR61Q9BZJ8 451 aa6.28□□□□□ -1.4
RIF1-211ENST00000494333 Q9H521 79 aa6.28□□□□□ -1.4
RIF1-211ENST00000494333 RDH8Q9NYR8 311 aa6.28□□□□□ -1.4
RIF1-211ENST00000494333 ZNF230Q9UIE0 474 aaPredicted RBP6.28□□□□□ -1.4
RIF1-211ENST00000494333 ZNF580Q9UK33 172 aa6.28□□□□□ -1.4
RIF1-211ENST00000494333 WASHC3Q9Y3C0 194 aa6.28□□□□□ -1.4
RIF1-211ENST00000494333 RBBP9O75884 186 aa6.27□□□□□ -1.41
RIF1-211ENST00000494333 TFAP2AP05549 437 aa6.27□□□□□ -1.41
RIF1-211ENST00000494333 FCGR3AP08637 254 aa6.27□□□□□ -1.41
RIF1-211ENST00000494333 TALDO1P37837 337 aa6.27□□□□□ -1.41
RIF1-211ENST00000494333 SERPINB10P48595 397 aa6.27□□□□□ -1.41
RIF1-211ENST00000494333 RAB9AP51151 201 aa6.27□□□□□ -1.41
RIF1-211ENST00000494333 TMEM267Q0VDI3 215 aaPredicted RBP6.27□□□□□ -1.41
RIF1-211ENST00000494333 ARFRP1Q13795 201 aa6.27□□□□□ -1.41
RIF1-211ENST00000494333 KIAA0141Q14154 515 aaPredicted RBP6.27□□□□□ -1.41
RIF1-211ENST00000494333 SRSF7Q16629 238 aaKnown RBP eCLIP6.27□□□□□ -1.41
RIF1-211ENST00000494333 ECSCRQ19T08 205 aa6.27□□□□□ -1.41
RIF1-211ENST00000494333 ZNF660Q6AZW8 331 aaPredicted RBP6.27□□□□□ -1.41
RIF1-211ENST00000494333 ZNF491Q8N8L2 437 aa6.27□□□□□ -1.41
RIF1-211ENST00000494333 ZNF383Q8NA42 475 aa6.27□□□□□ -1.41
RIF1-211ENST00000494333 MINDY2Q8NBR6 621 aa6.27□□□□□ -1.41
RIF1-211ENST00000494333 OR5M8Q8NGP6 311 aa6.27□□□□□ -1.41
RIF1-211ENST00000494333 OR10J5Q8NHC4 309 aa6.27□□□□□ -1.41
RIF1-211ENST00000494333 MAFIPQ8WZ33 124 aa6.27□□□□□ -1.41
RIF1-211ENST00000494333 OR5B12Q96R08 314 aa6.27□□□□□ -1.41
RIF1-211ENST00000494333 YTHDF1Q9BYJ9 559 aaKnown RBP6.27□□□□□ -1.41
RIF1-211ENST00000494333 ATG5Q9H1Y0 275 aa6.27□□□□□ -1.41
RIF1-211ENST00000494333 TXNL4BQ9NX01 149 aaKnown RBP6.27□□□□□ -1.41
RIF1-211ENST00000494333 METTL1Q9UBP6 276 aaKnown RBP6.27□□□□□ -1.41
RIF1-211ENST00000494333 FBXO7Q9Y3I1 522 aa6.27□□□□□ -1.41
RIF1-211ENST00000494333 A3GALT2U3KPV4 340 aa6.27□□□□□ -1.41
RIF1-211ENST00000494333 TRBV6-7A0A0A0MS04 114 aa6.26□□□□□ -1.41
RIF1-211ENST00000494333 A0A1W2PN81 502 aa6.26□□□□□ -1.41
RIF1-211ENST00000494333 M0R1X1 148 aa6.26□□□□□ -1.41
RIF1-211ENST00000494333 MFNGO00587 321 aa6.26□□□□□ -1.41
RIF1-211ENST00000494333 SOX15O60248 233 aa6.26□□□□□ -1.41
RIF1-211ENST00000494333 ACTL6BO94805 426 aa6.26□□□□□ -1.41
RIF1-211ENST00000494333 IGKV1-16P04430 117 aa6.26□□□□□ -1.41
RIF1-211ENST00000494333 HIST1H1DP16402 221 aaKnown RBP6.26□□□□□ -1.41
RIF1-211ENST00000494333 FGF9P31371 208 aaPredicted RBP6.26□□□□□ -1.41
RIF1-211ENST00000494333 CHRNA7P36544 502 aa6.26□□□□□ -1.41
RIF1-211ENST00000494333 NDPQ00604 133 aa6.26□□□□□ -1.41
RIF1-211ENST00000494333 PSG5Q15238 335 aa6.26□□□□□ -1.41
RIF1-211ENST00000494333 CDNFQ49AH0 187 aa6.26□□□□□ -1.41
RIF1-211ENST00000494333 ZNF562Q6V9R5 426 aa6.26□□□□□ -1.41
RIF1-211ENST00000494333 OR1N2Q8NGR9 330 aa6.26□□□□□ -1.41
RIF1-211ENST00000494333 MYOZ3Q8TDC0 251 aa6.26□□□□□ -1.41
RIF1-211ENST00000494333 CASTOR1Q8WTX7 329 aa6.26□□□□□ -1.41
RIF1-211ENST00000494333 FCGR1BQ92637 280 aa6.26□□□□□ -1.41
RIF1-211ENST00000494333 FLYWCH2Q96CP2 140 aaKnown RBP6.26□□□□□ -1.41
RIF1-211ENST00000494333 GINS4Q9BRT9 223 aa6.26□□□□□ -1.41
RIF1-211ENST00000494333 FAM103A1Q9BTL3 118 aaKnown RBP6.26□□□□□ -1.41
RIF1-211ENST00000494333 TM2D2Q9BX73 214 aa6.26□□□□□ -1.41
RIF1-211ENST00000494333 TOLLIPQ9H0E2 274 aa6.26□□□□□ -1.41
RIF1-211ENST00000494333 OR2D2Q9H210 308 aa6.26□□□□□ -1.41
RIF1-211ENST00000494333 OR51E2Q9H255 320 aa6.26□□□□□ -1.41
RIF1-211ENST00000494333 GNB4Q9HAV0 340 aa6.26□□□□□ -1.41
RIF1-211ENST00000494333 ZMAT5Q9UDW3 170 aaKnown RBP6.26□□□□□ -1.41
RIF1-211ENST00000494333 DAPK2Q9UIK4 370 aa6.26□□□□□ -1.41
RIF1-211ENST00000494333 ELF5Q9UKW6 265 aaPredicted RBP6.26□□□□□ -1.41
RIF1-211ENST00000494333 STUB1Q9UNE7 303 aa6.26□□□□□ -1.41
RIF1-211ENST00000494333 SSR3Q9UNL2 185 aa6.26□□□□□ -1.41
RIF1-211ENST00000494333 GAB2Q9UQC2 676 aa6.26□□□□□ -1.41
RIF1-211ENST00000494333 VSIG4Q9Y279 399 aa6.26□□□□□ -1.41
RIF1-211ENST00000494333 RBM7Q9Y580 266 aaKnown RBP6.26□□□□□ -1.41
RIF1-211ENST00000494333 NUBP2Q9Y5Y2 271 aa6.26□□□□□ -1.41
RIF1-211ENST00000494333 IGKV1D-8A0A087WSZ0 117 aa6.25□□□□□ -1.41
RIF1-211ENST00000494333 SEC14L6B5MCN3 397 aa6.25□□□□□ -1.41
RIF1-211ENST00000494333 I3L521 148 aa6.25□□□□□ -1.41
RIF1-211ENST00000494333 SLC25A17O43808 307 aa6.25□□□□□ -1.41
RIF1-211ENST00000494333 RAMP3O60896 148 aa6.25□□□□□ -1.41
RIF1-211ENST00000494333 CA2P00918 260 aa6.25□□□□□ -1.41
RIF1-211ENST00000494333 APOA2P02652 100 aa6.25□□□□□ -1.41
RIF1-211ENST00000494333 LUMP51884 338 aaPredicted RBP6.25□□□□□ -1.41
RIF1-211ENST00000494333 FAM3BP58499 235 aaPredicted RBP6.25□□□□□ -1.41
RIF1-211ENST00000494333 ZNF616Q08AN1 781 aa6.25□□□□□ -1.41
RIF1-211ENST00000494333 ARL6IP1Q15041 203 aa6.25□□□□□ -1.41
RIF1-211ENST00000494333 ZNF260Q3ZCT1 412 aa6.25□□□□□ -1.41
RIF1-211ENST00000494333 AKIRIN2Q53H80 203 aa6.25□□□□□ -1.41
RIF1-211ENST00000494333 ACTBL2Q562R1 376 aa6.25□□□□□ -1.41
RIF1-211ENST00000494333 C9orf66Q5T8R8 295 aa6.25□□□□□ -1.41
RIF1-211ENST00000494333 UNQ5815/PRO19632Q6UWF5 114 aa6.25□□□□□ -1.41
RIF1-211ENST00000494333 TPRA1Q86W33 373 aa6.25□□□□□ -1.41
RIF1-211ENST00000494333 PPP1R27Q86WC6 154 aa6.25□□□□□ -1.41
RIF1-211ENST00000494333 PDPNQ86YL7 162 aa6.25□□□□□ -1.41
RIF1-211ENST00000494333 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.25□□□□□ -1.41
RIF1-211ENST00000494333 LFNGQ8NES3 379 aa6.25□□□□□ -1.41
RIF1-211ENST00000494333 MS4A10Q96PG2 267 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms