RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 IGLV2-23P01705 113 aa11.57□□□□□ -0.56
BRCA1-223ENST00000494123 AMY1AP04745 511 aa11.57□□□□□ -0.56
BRCA1-223ENST00000494123 VSIG10L2P0DP72 767 aa11.57□□□□□ -0.56
BRCA1-223ENST00000494123 NQO2P16083 231 aa11.57□□□□□ -0.56
BRCA1-223ENST00000494123 ERVK-16P61578 105 aa11.57□□□□□ -0.56
BRCA1-223ENST00000494123 RELBQ01201 579 aa11.57□□□□□ -0.56
BRCA1-223ENST00000494123 TRIM16LQ309B1 348 aa11.57□□□□□ -0.56
BRCA1-223ENST00000494123 KRTAP24-1Q3LI83 254 aa11.57□□□□□ -0.56
BRCA1-223ENST00000494123 LIN54Q6MZP7 749 aa11.57□□□□□ -0.56
BRCA1-223ENST00000494123 Q6ZSV7 163 aa11.57□□□□□ -0.56
BRCA1-223ENST00000494123 SSX9Q7RTT3 188 aa11.57□□□□□ -0.56
BRCA1-223ENST00000494123 OR2T6Q8NHC8 308 aa11.57□□□□□ -0.56
BRCA1-223ENST00000494123 TMEM158Q8WZ71 300 aa11.57□□□□□ -0.56
BRCA1-223ENST00000494123 TMEM230Q96A57 120 aa11.57□□□□□ -0.56
BRCA1-223ENST00000494123 TP53RKQ96S44 253 aa11.57□□□□□ -0.56
BRCA1-223ENST00000494123 C20orf85Q9H1P6 137 aa11.57□□□□□ -0.56
BRCA1-223ENST00000494123 COMMD9Q9P000 198 aa11.57□□□□□ -0.56
BRCA1-223ENST00000494123 SRRM4A7MD48 611 aaKnown RBP11.57□□□□□ -0.56
BRCA1-223ENST00000494123 ARPC1BO15143 372 aaKnown RBP11.57□□□□□ -0.56
BRCA1-223ENST00000494123 TSPAN9O75954 239 aa11.57□□□□□ -0.56
BRCA1-223ENST00000494123 NDUFA7O95182 113 aa11.57□□□□□ -0.56
BRCA1-223ENST00000494123 TCRBP04435 133 aa11.57□□□□□ -0.56
BRCA1-223ENST00000494123 OR5AC1P0C628 307 aa11.57□□□□□ -0.56
BRCA1-223ENST00000494123 SAA1P0DJI8 122 aaPredicted RBP11.57□□□□□ -0.56
BRCA1-223ENST00000494123 HKR1P10072 659 aa11.57□□□□□ -0.56
BRCA1-223ENST00000494123 ANXA3P12429 323 aa11.57□□□□□ -0.56
BRCA1-223ENST00000494123 UBE2KP61086 200 aa11.57□□□□□ -0.56
BRCA1-223ENST00000494123 SP6Q3SY56 376 aa11.57□□□□□ -0.56
BRCA1-223ENST00000494123 ZNF585BQ52M93 769 aa11.57□□□□□ -0.56
BRCA1-223ENST00000494123 TMEM128Q5BJH2 165 aa11.57□□□□□ -0.56
BRCA1-223ENST00000494123 VKORC1L1Q8N0U8 176 aa11.57□□□□□ -0.56
BRCA1-223ENST00000494123 DMBX1Q8NFW5 382 aa11.57□□□□□ -0.56
BRCA1-223ENST00000494123 OR4F5Q8NH21 305 aa11.57□□□□□ -0.56
BRCA1-223ENST00000494123 VSTM2AQ8TAG5 236 aa11.57□□□□□ -0.56
BRCA1-223ENST00000494123 R3HDM4Q96D70 268 aa11.57□□□□□ -0.56
BRCA1-223ENST00000494123 RHOVQ96L33 236 aa11.57□□□□□ -0.56
BRCA1-223ENST00000494123 CLCC1Q96S66 551 aa11.57□□□□□ -0.56
BRCA1-223ENST00000494123 FLVCR2Q9UPI3 526 aa11.57□□□□□ -0.56
BRCA1-223ENST00000494123 ATRQ13535 2644 aa11.56□□□□□ -0.56
BRCA1-223ENST00000494123 RPA2P15927 270 aa11.56□□□□□ -0.56
BRCA1-223ENST00000494123 VAMP1P23763 118 aa11.56□□□□□ -0.56
BRCA1-223ENST00000494123 DHODHQ02127 395 aa11.56□□□□□ -0.56
BRCA1-223ENST00000494123 PPP1R27Q86WC6 154 aa11.56□□□□□ -0.56
BRCA1-223ENST00000494123 TEX45Q8NA69 505 aa11.56□□□□□ -0.56
BRCA1-223ENST00000494123 ZNF702PQ9H963 129 aa11.56□□□□□ -0.56
BRCA1-223ENST00000494123 PALMDQ9NP74 551 aa11.56□□□□□ -0.56
BRCA1-223ENST00000494123 NUDT15Q9NV35 164 aa11.56□□□□□ -0.56
BRCA1-223ENST00000494123 SIGLEC9Q9Y336 463 aa11.56□□□□□ -0.56
BRCA1-223ENST00000494123 TRAV6A0A075B6T7 132 aa11.55□□□□□ -0.56
BRCA1-223ENST00000494123 MARCH11A6NNE9 402 aa11.55□□□□□ -0.56
BRCA1-223ENST00000494123 CREBL2O60519 120 aaPredicted RBP11.55□□□□□ -0.56
BRCA1-223ENST00000494123 ATG12O94817 140 aa11.55□□□□□ -0.56
BRCA1-223ENST00000494123 OR2A4O95047 310 aa11.55□□□□□ -0.56
BRCA1-223ENST00000494123 KRASP01116 189 aa11.55□□□□□ -0.56
BRCA1-223ENST00000494123 HLA-DRB1P01911 266 aa11.55□□□□□ -0.56
BRCA1-223ENST00000494123 UCP1P25874 307 aa11.55□□□□□ -0.56
BRCA1-223ENST00000494123 UBE2MP61081 183 aaKnown RBP11.55□□□□□ -0.56
BRCA1-223ENST00000494123 Q6ZS46 218 aa11.55□□□□□ -0.56
BRCA1-223ENST00000494123 SLC25A42Q86VD7 318 aa11.55□□□□□ -0.56
BRCA1-223ENST00000494123 OR2A7Q96R45 310 aa11.55□□□□□ -0.56
BRCA1-223ENST00000494123 C19orf24Q9BVV8 132 aa11.55□□□□□ -0.56
BRCA1-223ENST00000494123 TMEM222Q9H0R3 208 aa11.55□□□□□ -0.56
BRCA1-223ENST00000494123 TPSG1Q9NRR2 321 aa11.55□□□□□ -0.56
BRCA1-223ENST00000494123 KCNAB3O43448 404 aa11.54□□□□□ -0.56
BRCA1-223ENST00000494123 G6PCP35575 357 aa11.54□□□□□ -0.56
BRCA1-223ENST00000494123 VDAC2P45880 294 aaPredicted RBP11.54□□□□□ -0.56
BRCA1-223ENST00000494123 GNB1P62873 340 aa11.54□□□□□ -0.56
BRCA1-223ENST00000494123 FOXL1Q12952 345 aa11.54□□□□□ -0.56
BRCA1-223ENST00000494123 DCTN2Q13561 401 aaKnown RBP11.54□□□□□ -0.56
BRCA1-223ENST00000494123 OR4A47Q6IF82 309 aa11.54□□□□□ -0.56
BRCA1-223ENST00000494123 NRARPQ7Z6K4 114 aa11.54□□□□□ -0.56
BRCA1-223ENST00000494123 SLC35E3Q7Z769 313 aa11.54□□□□□ -0.56
BRCA1-223ENST00000494123 ZNF695Q8IW36 515 aa11.54□□□□□ -0.56
BRCA1-223ENST00000494123 GALNT14Q96FL9 552 aa11.54□□□□□ -0.56
BRCA1-223ENST00000494123 C16orf95Q9H693 158 aa11.54□□□□□ -0.56
BRCA1-223ENST00000494123 BEX1Q9HBH7 125 aa11.54□□□□□ -0.56
BRCA1-223ENST00000494123 NUBP2Q9Y5Y2 271 aa11.54□□□□□ -0.56
BRCA1-223ENST00000494123 KBTBD11O94819 623 aa11.53□□□□□ -0.56
BRCA1-223ENST00000494123 CNIH1O95406 144 aa11.53□□□□□ -0.56
BRCA1-223ENST00000494123 CA2P00918 260 aa11.53□□□□□ -0.56
BRCA1-223ENST00000494123 IGHG2P01859 326 aa11.53□□□□□ -0.56
BRCA1-223ENST00000494123 CRYGBP07316 175 aa11.53□□□□□ -0.56
BRCA1-223ENST00000494123 H2AFB2P0C5Z0 115 aa11.53□□□□□ -0.56
BRCA1-223ENST00000494123 ANXA7P20073 488 aaKnown RBP11.53□□□□□ -0.56
BRCA1-223ENST00000494123 AKR1C2P52895 323 aa11.53□□□□□ -0.56
BRCA1-223ENST00000494123 SUPT4H1P63272 117 aaKnown RBP11.53□□□□□ -0.56
BRCA1-223ENST00000494123 PPP1R1AQ13522 171 aa11.53□□□□□ -0.56
BRCA1-223ENST00000494123 POU2AF1Q16633 256 aa11.53□□□□□ -0.56
BRCA1-223ENST00000494123 C4orf46Q504U0 113 aa11.53□□□□□ -0.56
BRCA1-223ENST00000494123 FOXRED2Q8IWF2 684 aa11.53□□□□□ -0.56
BRCA1-223ENST00000494123 PUSL1Q8N0Z8 303 aaKnown RBP11.53□□□□□ -0.56
BRCA1-223ENST00000494123 Q8N2B8 174 aa11.53□□□□□ -0.56
BRCA1-223ENST00000494123 RNASE11Q8TAA1 199 aaKnown RBP11.53□□□□□ -0.56
BRCA1-223ENST00000494123 ABHD5Q8WTS1 349 aa11.53□□□□□ -0.56
BRCA1-223ENST00000494123 GLYATL2Q8WU03 294 aa11.53□□□□□ -0.56
BRCA1-223ENST00000494123 HSPB9Q9BQS6 159 aa11.53□□□□□ -0.56
BRCA1-223ENST00000494123 TMEM140Q9NV12 185 aa11.53□□□□□ -0.56
BRCA1-223ENST00000494123 FCN1O00602 326 aa11.53□□□□□ -0.56
BRCA1-223ENST00000494123 ACTL6BO94805 426 aa11.53□□□□□ -0.56
BRCA1-223ENST00000494123 HLA-AP01891 365 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms