RNA–Protein interactions for RNA: ENST00000492451.1

PTPN7-215, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 5

Gene PTPN7, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-215	ENST00000492451	SRRM4	A7MD48	611 aa	Known RBP	10.83	□□□□□ -0.68
PTPN7-215	ENST00000492451	RBFOX2	O43251	390 aa	Known RBP eCLIP	10.83	□□□□□ -0.68
PTPN7-215	ENST00000492451	CNIH1	O95406	144 aa		10.83	□□□□□ -0.68
PTPN7-215	ENST00000492451	HRAS	P01112	189 aa		10.83	□□□□□ -0.68
PTPN7-215	ENST00000492451	PF4V1	P10720	104 aa		10.83	□□□□□ -0.68
PTPN7-215	ENST00000492451	PPIF	P30405	207 aa	Known RBP	10.83	□□□□□ -0.68
PTPN7-215	ENST00000492451	TNFSF8	P32971	234 aa		10.83	□□□□□ -0.68
PTPN7-215	ENST00000492451	TAS2R19	P59542	299 aa		10.83	□□□□□ -0.68
PTPN7-215	ENST00000492451	RPL23A	P62750	156 aa	Known RBP	10.83	□□□□□ -0.68
PTPN7-215	ENST00000492451	DEFA6	Q01524	100 aa		10.83	□□□□□ -0.68
PTPN7-215	ENST00000492451	FXYD3	Q14802	87 aa		10.83	□□□□□ -0.68
PTPN7-215	ENST00000492451	AKIRIN2	Q53H80	203 aa		10.83	□□□□□ -0.68
PTPN7-215	ENST00000492451	FOXB2	Q5VYV0	432 aa		10.83	□□□□□ -0.68
PTPN7-215	ENST00000492451	TMEM65	Q6PI78	240 aa		10.83	□□□□□ -0.68
PTPN7-215	ENST00000492451	ARRDC1	Q8N5I2	433 aa		10.83	□□□□□ -0.68
PTPN7-215	ENST00000492451	POC5	Q8NA72	575 aa		10.83	□□□□□ -0.68
PTPN7-215	ENST00000492451	TMEM229B	Q8NBD8	167 aa		10.83	□□□□□ -0.68
PTPN7-215	ENST00000492451	MINDY2	Q8NBR6	621 aa		10.83	□□□□□ -0.68
PTPN7-215	ENST00000492451	VSTM2A	Q8TAG5	236 aa		10.83	□□□□□ -0.68
PTPN7-215	ENST00000492451	SMIM4	Q8WVI0	70 aa		10.83	□□□□□ -0.68
PTPN7-215	ENST00000492451	ARPC1A	Q92747	370 aa		10.83	□□□□□ -0.68
PTPN7-215	ENST00000492451	TPSG1	Q9NRR2	321 aa		10.83	□□□□□ -0.68
PTPN7-215	ENST00000492451	NUBP2	Q9Y5Y2	271 aa		10.83	□□□□□ -0.68
PTPN7-215	ENST00000492451		G3V318	75 aa		10.82	□□□□□ -0.68
PTPN7-215	ENST00000492451		M0QYG6	137 aa		10.82	□□□□□ -0.68
PTPN7-215	ENST00000492451	GPR31	O00270	319 aa		10.82	□□□□□ -0.68
PTPN7-215	ENST00000492451	IGLV1-40	P01703	118 aa		10.82	□□□□□ -0.68
PTPN7-215	ENST00000492451	CD3D	P04234	171 aa		10.82	□□□□□ -0.68
PTPN7-215	ENST00000492451	PSMB8	P28062	276 aa		10.82	□□□□□ -0.68
PTPN7-215	ENST00000492451	UCP3	P55916	312 aa		10.82	□□□□□ -0.68
PTPN7-215	ENST00000492451	GNB1	P62873	340 aa		10.82	□□□□□ -0.68
PTPN7-215	ENST00000492451	DGCR2	P98153	550 aa		10.82	□□□□□ -0.68
PTPN7-215	ENST00000492451	NDP	Q00604	133 aa		10.82	□□□□□ -0.68
PTPN7-215	ENST00000492451	ECSCR	Q19T08	205 aa		10.82	□□□□□ -0.68
PTPN7-215	ENST00000492451	AADACL3	Q5VUY0	350 aa		10.82	□□□□□ -0.68
PTPN7-215	ENST00000492451	SPAG16	Q8N0X2	631 aa		10.82	□□□□□ -0.68
PTPN7-215	ENST00000492451	GPHA2	Q96T91	129 aa		10.82	□□□□□ -0.68
PTPN7-215	ENST00000492451	FXYD6	Q9H0Q3	95 aa		10.82	□□□□□ -0.68
PTPN7-215	ENST00000492451	FOXA2	Q9Y261	457 aa	Predicted RBP	10.82	□□□□□ -0.68
PTPN7-215	ENST00000492451	FBXO7	Q9Y3I1	522 aa		10.82	□□□□□ -0.68
PTPN7-215	ENST00000492451	PLXNB1	O43157	2135 aa		10.82	□□□□□ -0.68
PTPN7-215	ENST00000492451	NUDT19	A8MXV4	375 aa		10.81	□□□□□ -0.68
PTPN7-215	ENST00000492451	GSTZ1	O43708	216 aa	Predicted RBP	10.81	□□□□□ -0.68
PTPN7-215	ENST00000492451	PGLYRP1	O75594	196 aa	Predicted RBP	10.81	□□□□□ -0.68
PTPN7-215	ENST00000492451	ACTL6B	O94805	426 aa		10.81	□□□□□ -0.68
PTPN7-215	ENST00000492451	RAB3D	O95716	219 aa		10.81	□□□□□ -0.68
PTPN7-215	ENST00000492451	CD74	P04233	296 aa		10.81	□□□□□ -0.68
PTPN7-215	ENST00000492451	RPLP1	P05386	114 aa	Known RBP	10.81	□□□□□ -0.68
PTPN7-215	ENST00000492451	SAA1	P0DJI8	122 aa	Predicted RBP	10.81	□□□□□ -0.68
PTPN7-215	ENST00000492451	EGR2	P11161	476 aa	Predicted RBP	10.81	□□□□□ -0.68
PTPN7-215	ENST00000492451	CD40LG	P29965	261 aa		10.81	□□□□□ -0.68
PTPN7-215	ENST00000492451	CDX1	P47902	265 aa	Predicted RBP	10.81	□□□□□ -0.68
PTPN7-215	ENST00000492451	BRWD1-AS2	P59051	145 aa		10.81	□□□□□ -0.68
PTPN7-215	ENST00000492451	PJVK	Q0ZLH3	352 aa		10.81	□□□□□ -0.68
PTPN7-215	ENST00000492451	MEF2D	Q14814	521 aa		10.81	□□□□□ -0.68
PTPN7-215	ENST00000492451	PRSS8	Q16651	343 aa		10.81	□□□□□ -0.68
PTPN7-215	ENST00000492451	C19orf54	Q5BKX5	351 aa		10.81	□□□□□ -0.68
PTPN7-215	ENST00000492451	STEAP1B	Q6NZ63	245 aa		10.81	□□□□□ -0.68
PTPN7-215	ENST00000492451	UNQ5815/PRO19632	Q6UWF5	114 aa		10.81	□□□□□ -0.68
PTPN7-215	ENST00000492451	ZNF695	Q8IW36	515 aa		10.81	□□□□□ -0.68
PTPN7-215	ENST00000492451	MMD2	Q8IY49	270 aa		10.81	□□□□□ -0.68
PTPN7-215	ENST00000492451	SLC38A6	Q8IZM9	456 aa		10.81	□□□□□ -0.68
PTPN7-215	ENST00000492451	KLHL30-AS1	Q8NEE0	82 aa		10.81	□□□□□ -0.68
PTPN7-215	ENST00000492451	OR5M8	Q8NGP6	311 aa		10.81	□□□□□ -0.68
PTPN7-215	ENST00000492451	OR51H1	Q8NH63	302 aa		10.81	□□□□□ -0.68
PTPN7-215	ENST00000492451	GRPEL2	Q8TAA5	225 aa		10.81	□□□□□ -0.68
PTPN7-215	ENST00000492451	TMEM68	Q96MH6	324 aa		10.81	□□□□□ -0.68
PTPN7-215	ENST00000492451	SOST	Q9BQB4	213 aa		10.81	□□□□□ -0.68
PTPN7-215	ENST00000492451	RSRP1	Q9BUV0	290 aa		10.81	□□□□□ -0.68
PTPN7-215	ENST00000492451	PTTG2	Q9NZH5	202 aa		10.81	□□□□□ -0.68
PTPN7-215	ENST00000492451		A0A1W2PN81	502 aa		10.8	□□□□□ -0.68
PTPN7-215	ENST00000492451	ARPC1B	O15143	372 aa	Known RBP	10.8	□□□□□ -0.68
PTPN7-215	ENST00000492451	OR2A4	O95047	310 aa		10.8	□□□□□ -0.68
PTPN7-215	ENST00000492451	HPRT1	P00492	218 aa		10.8	□□□□□ -0.68
PTPN7-215	ENST00000492451	PF4	P02776	101 aa		10.8	□□□□□ -0.68
PTPN7-215	ENST00000492451	RLN1	P04808	185 aa		10.8	□□□□□ -0.68
PTPN7-215	ENST00000492451	CHRNA7	P36544	502 aa		10.8	□□□□□ -0.68
PTPN7-215	ENST00000492451	ETV6	P41212	452 aa		10.8	□□□□□ -0.68
PTPN7-215	ENST00000492451	TAS2R31	P59538	309 aa		10.8	□□□□□ -0.68
PTPN7-215	ENST00000492451	ZNF45	Q02386	682 aa		10.8	□□□□□ -0.68
PTPN7-215	ENST00000492451	CNPY1	Q3B7I2	92 aa		10.8	□□□□□ -0.68
PTPN7-215	ENST00000492451	IDO2	Q6ZQW0	420 aa		10.8	□□□□□ -0.68
PTPN7-215	ENST00000492451	LFNG	Q8NES3	379 aa		10.8	□□□□□ -0.68
PTPN7-215	ENST00000492451	OR6Q1	Q8NGQ2	317 aa		10.8	□□□□□ -0.68
PTPN7-215	ENST00000492451	RHOV	Q96L33	236 aa		10.8	□□□□□ -0.68
PTPN7-215	ENST00000492451	OR2A7	Q96R45	310 aa		10.8	□□□□□ -0.68
PTPN7-215	ENST00000492451	FAM103A1	Q9BTL3	118 aa	Known RBP	10.8	□□□□□ -0.68
PTPN7-215	ENST00000492451	TINAGL1	Q9GZM7	467 aa	Predicted RBP	10.8	□□□□□ -0.68
PTPN7-215	ENST00000492451	PLEKHA2	Q9HB19	425 aa		10.8	□□□□□ -0.68
PTPN7-215	ENST00000492451	RAMP3	O60896	148 aa		10.79	□□□□□ -0.68
PTPN7-215	ENST00000492451	KBTBD11	O94819	623 aa		10.79	□□□□□ -0.68
PTPN7-215	ENST00000492451	NQO2	P16083	231 aa		10.79	□□□□□ -0.68
PTPN7-215	ENST00000492451	F2R	P25116	425 aa		10.79	□□□□□ -0.68
PTPN7-215	ENST00000492451	MAS1L	P35410	378 aa		10.79	□□□□□ -0.68
PTPN7-215	ENST00000492451	AP3S2	P59780	193 aa		10.79	□□□□□ -0.68
PTPN7-215	ENST00000492451	SSBP2	P81877	361 aa	Predicted RBP	10.79	□□□□□ -0.68
PTPN7-215	ENST00000492451	TNXA	Q16473	311 aa		10.79	□□□□□ -0.68
PTPN7-215	ENST00000492451	PYDC2	Q56P42	97 aa		10.79	□□□□□ -0.68
PTPN7-215	ENST00000492451	CCDC190	Q86UF4	302 aa		10.79	□□□□□ -0.68
PTPN7-215	ENST00000492451	LHFPL1	Q86WI0	220 aa		10.79	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms