RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, human

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-231	ENST00000492170	KLF5	Q13887	457 aa	Predicted RBP	11.73	□□□□□ -0.53
MRPL55-231	ENST00000492170	TMEM177	Q53S58	311 aa		11.73	□□□□□ -0.53
MRPL55-231	ENST00000492170	IGSF11	Q5DX21	431 aa		11.73	□□□□□ -0.53
MRPL55-231	ENST00000492170	UBE2NL	Q5JXB2	153 aa		11.73	□□□□□ -0.53
MRPL55-231	ENST00000492170		Q8N1Y9	231 aa		11.73	□□□□□ -0.53
MRPL55-231	ENST00000492170	OR9G4	Q8NGQ1	327 aa		11.73	□□□□□ -0.53
MRPL55-231	ENST00000492170	NUDCD2	Q8WVJ2	157 aa		11.73	□□□□□ -0.53
MRPL55-231	ENST00000492170	USMG5	Q96IX5	58 aa		11.73	□□□□□ -0.53
MRPL55-231	ENST00000492170	CMTM3	Q96MX0	182 aa		11.73	□□□□□ -0.53
MRPL55-231	ENST00000492170	PHB2	Q99623	299 aa		11.73	□□□□□ -0.53
MRPL55-231	ENST00000492170	BCL7B	Q9BQE9	202 aa		11.73	□□□□□ -0.53
MRPL55-231	ENST00000492170	GINS4	Q9BRT9	223 aa		11.73	□□□□□ -0.53
MRPL55-231	ENST00000492170	TINAGL1	Q9GZM7	467 aa	Predicted RBP	11.73	□□□□□ -0.53
MRPL55-231	ENST00000492170	DCSTAMP	Q9H295	470 aa		11.73	□□□□□ -0.53
MRPL55-231	ENST00000492170	COA4	Q9NYJ1	87 aa		11.73	□□□□□ -0.53
MRPL55-231	ENST00000492170	ZNF230	Q9UIE0	474 aa	Predicted RBP	11.73	□□□□□ -0.53
MRPL55-231	ENST00000492170	SSX5	O60225	188 aa		11.72	□□□□□ -0.53
MRPL55-231	ENST00000492170	GSTT2	P0CG29	244 aa		11.72	□□□□□ -0.53
MRPL55-231	ENST00000492170	GSTT2B	P0CG30	244 aa		11.72	□□□□□ -0.53
MRPL55-231	ENST00000492170	TALDO1	P37837	337 aa		11.72	□□□□□ -0.53
MRPL55-231	ENST00000492170	SYNJ2BP	P57105	145 aa		11.72	□□□□□ -0.53
MRPL55-231	ENST00000492170	TATDN3	Q17R31	274 aa		11.72	□□□□□ -0.53
MRPL55-231	ENST00000492170	VMA21	Q3ZAQ7	101 aa		11.72	□□□□□ -0.53
MRPL55-231	ENST00000492170	SAMD12	Q8N8I0	201 aa		11.72	□□□□□ -0.53
MRPL55-231	ENST00000492170	BVES	Q8NE79	360 aa		11.72	□□□□□ -0.53
MRPL55-231	ENST00000492170	RAB2B	Q8WUD1	216 aa		11.72	□□□□□ -0.53
MRPL55-231	ENST00000492170	ACOT12	Q8WYK0	555 aa		11.72	□□□□□ -0.53
MRPL55-231	ENST00000492170	MAFIP	Q8WZ33	124 aa		11.72	□□□□□ -0.53
MRPL55-231	ENST00000492170	ISOC1	Q96CN7	298 aa		11.72	□□□□□ -0.53
MRPL55-231	ENST00000492170	C5orf30	Q96GV9	206 aa		11.72	□□□□□ -0.53
MRPL55-231	ENST00000492170	ADTRP	Q96IZ2	230 aa		11.72	□□□□□ -0.53
MRPL55-231	ENST00000492170	DIABLO	Q9NR28	239 aa		11.72	□□□□□ -0.53
MRPL55-231	ENST00000492170	C19orf73	Q9NVV2	129 aa		11.72	□□□□□ -0.53
MRPL55-231	ENST00000492170	PEF1	Q9UBV8	284 aa	Known RBP	11.72	□□□□□ -0.53
MRPL55-231	ENST00000492170	TRAV18	A0A075B6X5	111 aa		11.71	□□□□□ -0.53
MRPL55-231	ENST00000492170	IGKV1D-8	A0A087WSZ0	117 aa		11.71	□□□□□ -0.53
MRPL55-231	ENST00000492170	XRCC3	O43542	346 aa		11.71	□□□□□ -0.53
MRPL55-231	ENST00000492170	RORC	P51449	518 aa		11.71	□□□□□ -0.53
MRPL55-231	ENST00000492170	TMBIM6	P55061	237 aa		11.71	□□□□□ -0.53
MRPL55-231	ENST00000492170	GNG2	P59768	71 aa		11.71	□□□□□ -0.53
MRPL55-231	ENST00000492170	DEFA5	Q01523	94 aa		11.71	□□□□□ -0.53
MRPL55-231	ENST00000492170	ZNF343	Q6P1L6	599 aa		11.71	□□□□□ -0.53
MRPL55-231	ENST00000492170	GTSCR1	Q86UQ5	136 aa		11.71	□□□□□ -0.53
MRPL55-231	ENST00000492170	CLVS1	Q8IUQ0	354 aa	Predicted RBP	11.71	□□□□□ -0.53
MRPL55-231	ENST00000492170	S100A16	Q96FQ6	103 aa	Known RBP	11.71	□□□□□ -0.53
MRPL55-231	ENST00000492170	AUNIP	Q9H7T9	357 aa		11.71	□□□□□ -0.53
MRPL55-231	ENST00000492170	STARD9	Q9P2P6	4700 aa		11.71	□□□□□ -0.54
MRPL55-231	ENST00000492170	SRRM4	A7MD48	611 aa	Known RBP	11.7	□□□□□ -0.54
MRPL55-231	ENST00000492170	CRYZL1	O95825	349 aa		11.7	□□□□□ -0.54
MRPL55-231	ENST00000492170	APELA	P0DMC3	54 aa		11.7	□□□□□ -0.54
MRPL55-231	ENST00000492170	UBE2K	P61086	200 aa		11.7	□□□□□ -0.54
MRPL55-231	ENST00000492170	DYRK1A	Q13627	763 aa		11.7	□□□□□ -0.54
MRPL55-231	ENST00000492170	SPCS2	Q15005	226 aa		11.7	□□□□□ -0.54
MRPL55-231	ENST00000492170	TNXA	Q16473	311 aa		11.7	□□□□□ -0.54
MRPL55-231	ENST00000492170	RPEL1	Q2QD12	228 aa		11.7	□□□□□ -0.54
MRPL55-231	ENST00000492170	LCN12	Q6JVE5	192 aa		11.7	□□□□□ -0.54
MRPL55-231	ENST00000492170	IL34	Q6ZMJ4	242 aa		11.7	□□□□□ -0.54
MRPL55-231	ENST00000492170	TEX45	Q8NA69	505 aa		11.7	□□□□□ -0.54
MRPL55-231	ENST00000492170	SPATA25	Q9BR10	227 aa		11.7	□□□□□ -0.54
MRPL55-231	ENST00000492170	TENM2	Q9NT68	2774 aa		11.7	□□□□□ -0.54
MRPL55-231	ENST00000492170	LYST	Q99698	3801 aa		11.69	□□□□□ -0.54
MRPL55-231	ENST00000492170	MSGN1	A6NI15	193 aa		11.69	□□□□□ -0.54
MRPL55-231	ENST00000492170	MPPED1	O15442	326 aa		11.69	□□□□□ -0.54
MRPL55-231	ENST00000492170	CREBL2	O60519	120 aa	Predicted RBP	11.69	□□□□□ -0.54
MRPL55-231	ENST00000492170	TRBV12-3	P01733	135 aa		11.69	□□□□□ -0.54
MRPL55-231	ENST00000492170	APOA1	P02647	267 aa		11.69	□□□□□ -0.54
MRPL55-231	ENST00000492170	EIF4E	P06730	217 aa	Known RBP	11.69	□□□□□ -0.54
MRPL55-231	ENST00000492170	OR9G9	P0C7N8	305 aa		11.69	□□□□□ -0.54
MRPL55-231	ENST00000492170	ZNF182	P17025	639 aa	Predicted RBP	11.69	□□□□□ -0.54
MRPL55-231	ENST00000492170	DUT	P33316	252 aa	Known RBP	11.69	□□□□□ -0.54
MRPL55-231	ENST00000492170	PRSS8	Q16651	343 aa		11.69	□□□□□ -0.54
MRPL55-231	ENST00000492170	ZFAND6	Q6FIF0	208 aa		11.69	□□□□□ -0.54
MRPL55-231	ENST00000492170		Q8N402	240 aa		11.69	□□□□□ -0.54
MRPL55-231	ENST00000492170	ADAD2	Q8NCV1	583 aa	Known RBP	11.69	□□□□□ -0.54
MRPL55-231	ENST00000492170	OSR1	Q8TAX0	266 aa	Predicted RBP	11.69	□□□□□ -0.54
MRPL55-231	ENST00000492170	SRSF12	Q8WXF0	261 aa	Known RBP	11.69	□□□□□ -0.54
MRPL55-231	ENST00000492170	DDB2	Q92466	427 aa		11.69	□□□□□ -0.54
MRPL55-231	ENST00000492170	AP3S1	Q92572	193 aa		11.69	□□□□□ -0.54
MRPL55-231	ENST00000492170	SNAPC3	Q92966	411 aa		11.69	□□□□□ -0.54
MRPL55-231	ENST00000492170	TUBA4B	Q9H853	241 aa		11.69	□□□□□ -0.54
MRPL55-231	ENST00000492170	SIGLEC8	Q9NYZ4	499 aa		11.69	□□□□□ -0.54
MRPL55-231	ENST00000492170	COMMD3	Q9UBI1	195 aa		11.69	□□□□□ -0.54
MRPL55-231	ENST00000492170	ACTL6B	O94805	426 aa		11.68	□□□□□ -0.54
MRPL55-231	ENST00000492170	OR2A4	O95047	310 aa		11.68	□□□□□ -0.54
MRPL55-231	ENST00000492170	CSN3	P07498	182 aa		11.68	□□□□□ -0.54
MRPL55-231	ENST00000492170	TAS2R20	P59543	309 aa		11.68	□□□□□ -0.54
MRPL55-231	ENST00000492170	MRGPRG-AS1	Q2M3A8	158 aa		11.68	□□□□□ -0.54
MRPL55-231	ENST00000492170	TMEM69	Q5SWH9	247 aa		11.68	□□□□□ -0.54
MRPL55-231	ENST00000492170	IDO2	Q6ZQW0	420 aa		11.68	□□□□□ -0.54
MRPL55-231	ENST00000492170	H1FOO	Q8IZA3	346 aa	Predicted RBP	11.68	□□□□□ -0.54
MRPL55-231	ENST00000492170	ST6GALNAC5	Q9BVH7	336 aa		11.68	□□□□□ -0.54
MRPL55-231	ENST00000492170	EDA2R	Q9HAV5	297 aa		11.68	□□□□□ -0.54
MRPL55-231	ENST00000492170	PEMT	Q9UBM1	199 aa		11.68	□□□□□ -0.54
MRPL55-231	ENST00000492170	ANXA10	Q9UJ72	324 aa		11.68	□□□□□ -0.54
MRPL55-231	ENST00000492170	ADAM30	Q9UKF2	790 aa		11.68	□□□□□ -0.54
MRPL55-231	ENST00000492170	LCE6A	A0A183	80 aa		11.67	□□□□□ -0.54
MRPL55-231	ENST00000492170	FAM223B	A6NKX1	122 aa		11.67	□□□□□ -0.54
MRPL55-231	ENST00000492170	LINC00473	A8K010	186 aa		11.67	□□□□□ -0.54
MRPL55-231	ENST00000492170	PTHLH	P12272	177 aa		11.67	□□□□□ -0.54
MRPL55-231	ENST00000492170	RHOG	P84095	191 aa		11.67	□□□□□ -0.54

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