RNA–Protein interactions for RNA: ENST00000491233.1

COL6A3-211, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 3

Gene COL6A3, Length 652 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-211ENST00000491233 ZNF45Q02386 682 aa10.39□□□□□ -0.75
COL6A3-211ENST00000491233 CDNFQ49AH0 187 aa10.39□□□□□ -0.75
COL6A3-211ENST00000491233 UBE2UQ5VVX9 321 aa10.39□□□□□ -0.75
COL6A3-211ENST00000491233 HACD4Q5VWC8 232 aa10.39□□□□□ -0.75
COL6A3-211ENST00000491233 MMD2Q8IY49 270 aa10.39□□□□□ -0.75
COL6A3-211ENST00000491233 LGALS14Q8TCE9 139 aa10.39□□□□□ -0.75
COL6A3-211ENST00000491233 DCUN1D5Q9BTE7 237 aa10.39□□□□□ -0.75
COL6A3-211ENST00000491233 ST6GALNAC5Q9BVH7 336 aa10.39□□□□□ -0.75
COL6A3-211ENST00000491233 AKIP1Q9NQ31 210 aa10.39□□□□□ -0.75
COL6A3-211ENST00000491233 TXNL4BQ9NX01 149 aaKnown RBP10.39□□□□□ -0.75
COL6A3-211ENST00000491233 MRPS7Q9Y2R9 242 aaKnown RBP10.39□□□□□ -0.75
COL6A3-211ENST00000491233 RBMX2Q9Y388 322 aaKnown RBP10.39□□□□□ -0.75
COL6A3-211ENST00000491233 OR2W1Q9Y3N9 320 aa10.39□□□□□ -0.75
COL6A3-211ENST00000491233 IGKV1D-13A0A0B4J2D9 117 aa10.38□□□□□ -0.75
COL6A3-211ENST00000491233 FAM223BA6NKX1 122 aa10.38□□□□□ -0.75
COL6A3-211ENST00000491233 MRPS14O60783 128 aaKnown RBP10.38□□□□□ -0.75
COL6A3-211ENST00000491233 TUSC2O75896 110 aa10.38□□□□□ -0.75
COL6A3-211ENST00000491233 ACTL6BO94805 426 aa10.38□□□□□ -0.75
COL6A3-211ENST00000491233 OR2A4O95047 310 aa10.38□□□□□ -0.75
COL6A3-211ENST00000491233 HLA-DQB1P01920 261 aa10.38□□□□□ -0.75
COL6A3-211ENST00000491233 CSN3P07498 182 aa10.38□□□□□ -0.75
COL6A3-211ENST00000491233 CTXN2P0C2S0 81 aa10.38□□□□□ -0.75
COL6A3-211ENST00000491233 IGKV1-13P0DP09 117 aa10.38□□□□□ -0.75
COL6A3-211ENST00000491233 FGF9P31371 208 aaPredicted RBP10.38□□□□□ -0.75
COL6A3-211ENST00000491233 GNG2P59768 71 aa10.38□□□□□ -0.75
COL6A3-211ENST00000491233 TATDN3Q17R31 274 aa10.38□□□□□ -0.75
COL6A3-211ENST00000491233 LCN12Q6JVE5 192 aa10.38□□□□□ -0.75
COL6A3-211ENST00000491233 FAM223AQ8IWN6 122 aa10.38□□□□□ -0.75
COL6A3-211ENST00000491233 SNAPC3Q92966 411 aa10.38□□□□□ -0.75
COL6A3-211ENST00000491233 CITED4Q96RK1 184 aa10.38□□□□□ -0.75
COL6A3-211ENST00000491233 SPIN2AQ99865 258 aa10.38□□□□□ -0.75
COL6A3-211ENST00000491233 SPIN2BQ9BPZ2 258 aa10.38□□□□□ -0.75
COL6A3-211ENST00000491233 PALMDQ9NP74 551 aa10.38□□□□□ -0.75
COL6A3-211ENST00000491233 DAPK2Q9UIK4 370 aa10.38□□□□□ -0.75
COL6A3-211ENST00000491233 PRELID3BQ9Y3B1 194 aa10.38□□□□□ -0.75
COL6A3-211ENST00000491233 BMPR1BO00238 502 aa10.37□□□□□ -0.75
COL6A3-211ENST00000491233 SSX5O60225 188 aa10.37□□□□□ -0.75
COL6A3-211ENST00000491233 SCGNO76038 276 aa10.37□□□□□ -0.75
COL6A3-211ENST00000491233 IGLV2-14P01704 120 aa10.37□□□□□ -0.75
COL6A3-211ENST00000491233 LYL1P12980 280 aa10.37□□□□□ -0.75
COL6A3-211ENST00000491233 CNIH2Q6PI25 160 aa10.37□□□□□ -0.75
COL6A3-211ENST00000491233 GTSCR1Q86UQ5 136 aa10.37□□□□□ -0.75
COL6A3-211ENST00000491233 VKORC1L1Q8N0U8 176 aa10.37□□□□□ -0.75
COL6A3-211ENST00000491233 SPARTQ8N0X7 666 aa10.37□□□□□ -0.75
COL6A3-211ENST00000491233 Q8N402 240 aa10.37□□□□□ -0.75
COL6A3-211ENST00000491233 FCGR1BQ92637 280 aa10.37□□□□□ -0.75
COL6A3-211ENST00000491233 THAP7Q9BT49 309 aaPredicted RBP10.37□□□□□ -0.75
COL6A3-211ENST00000491233 DCSTAMPQ9H295 470 aa10.37□□□□□ -0.75
COL6A3-211ENST00000491233 SIGLEC8Q9NYZ4 499 aa10.37□□□□□ -0.75
COL6A3-211ENST00000491233 PEMTQ9UBM1 199 aa10.37□□□□□ -0.75
COL6A3-211ENST00000491233 RRP15Q9Y3B9 282 aaKnown RBP10.37□□□□□ -0.75
COL6A3-211ENST00000491233 TRBV9A0A0B4J1U6 114 aa10.36□□□□□ -0.75
COL6A3-211ENST00000491233 IZUMO1RA6ND01 250 aa10.36□□□□□ -0.75
COL6A3-211ENST00000491233 HMX3A6NHT5 357 aa10.36□□□□□ -0.75
COL6A3-211ENST00000491233 OR2J3O76001 311 aa10.36□□□□□ -0.75
COL6A3-211ENST00000491233 SLC22A5O76082 557 aa10.36□□□□□ -0.75
COL6A3-211ENST00000491233 ATP5G2Q06055 141 aa10.36□□□□□ -0.75
COL6A3-211ENST00000491233 ZFAND6Q6FIF0 208 aa10.36□□□□□ -0.75
COL6A3-211ENST00000491233 SFXN4Q6P4A7 337 aa10.36□□□□□ -0.75
COL6A3-211ENST00000491233 TPRA1Q86W33 373 aa10.36□□□□□ -0.75
COL6A3-211ENST00000491233 OR4S2Q8NH73 311 aa10.36□□□□□ -0.75
COL6A3-211ENST00000491233 TCTEX1D2Q8WW35 142 aa10.36□□□□□ -0.75
COL6A3-211ENST00000491233 ISOC1Q96CN7 298 aa10.36□□□□□ -0.75
COL6A3-211ENST00000491233 SPATA25Q9BR10 227 aa10.36□□□□□ -0.75
COL6A3-211ENST00000491233 OR51E2Q9H255 320 aa10.36□□□□□ -0.75
COL6A3-211ENST00000491233 EDA2RQ9HAV5 297 aa10.36□□□□□ -0.75
COL6A3-211ENST00000491233 RHBDL2Q9NX52 303 aa10.36□□□□□ -0.75
COL6A3-211ENST00000491233 ANXA10Q9UJ72 324 aa10.36□□□□□ -0.75
COL6A3-211ENST00000491233 SSR3Q9UNL2 185 aa10.36□□□□□ -0.75
COL6A3-211ENST00000491233 RYR2Q92736 4967 aa10.35□□□□□ -0.75
COL6A3-211ENST00000491233 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.35□□□□□ -0.75
COL6A3-211ENST00000491233 KBTBD11O94819 623 aa10.35□□□□□ -0.75
COL6A3-211ENST00000491233 EIF4EBP1Q13541 118 aaPredicted RBP10.35□□□□□ -0.75
COL6A3-211ENST00000491233 HAGHQ16775 308 aa10.35□□□□□ -0.75
COL6A3-211ENST00000491233 C19orf35Q6ZS72 473 aa10.35□□□□□ -0.75
COL6A3-211ENST00000491233 TTC9CQ8N5M4 171 aa10.35□□□□□ -0.75
COL6A3-211ENST00000491233 NECAP1Q8NC96 275 aa10.35□□□□□ -0.75
COL6A3-211ENST00000491233 VSTM2AQ8TAG5 236 aa10.35□□□□□ -0.75
COL6A3-211ENST00000491233 HSD17B10Q99714 261 aaKnown RBP10.35□□□□□ -0.75
COL6A3-211ENST00000491233 TAS2R8Q9NYW2 309 aa10.35□□□□□ -0.75
COL6A3-211ENST00000491233 SPATA2Q9UM82 520 aa10.35□□□□□ -0.75
COL6A3-211ENST00000491233 ZNF257Q9Y2Q1 563 aa10.35□□□□□ -0.75
COL6A3-211ENST00000491233 TEX22C9J3V5 150 aa10.34□□□□□ -0.75
COL6A3-211ENST00000491233 PPP5D1E7EU14 171 aa10.34□□□□□ -0.75
COL6A3-211ENST00000491233 CLEC2LP0C7M8 214 aa10.34□□□□□ -0.75
COL6A3-211ENST00000491233 SDC2P34741 201 aa10.34□□□□□ -0.75
COL6A3-211ENST00000491233 RPL27AP46776 148 aaKnown RBP10.34□□□□□ -0.75
COL6A3-211ENST00000491233 MXD1Q05195 221 aa10.34□□□□□ -0.75
COL6A3-211ENST00000491233 C15orf32Q32M92 178 aa10.34□□□□□ -0.75
COL6A3-211ENST00000491233 ADAMTSL5Q6ZMM2 481 aa10.34□□□□□ -0.75
COL6A3-211ENST00000491233 SLC25A42Q86VD7 318 aa10.34□□□□□ -0.75
COL6A3-211ENST00000491233 PUSL1Q8N0Z8 303 aaKnown RBP10.34□□□□□ -0.75
COL6A3-211ENST00000491233 OR2K2Q8NGT1 345 aa10.34□□□□□ -0.75
COL6A3-211ENST00000491233 OR5H6Q8NGV6 325 aa10.34□□□□□ -0.75
COL6A3-211ENST00000491233 TMEM167AQ8TBQ9 72 aa10.34□□□□□ -0.75
COL6A3-211ENST00000491233 DYNLRB2Q8TF09 96 aa10.34□□□□□ -0.75
COL6A3-211ENST00000491233 SLC25A38Q96DW6 304 aa10.34□□□□□ -0.75
COL6A3-211ENST00000491233 FYTTD1Q96QD9 318 aaKnown RBP10.34□□□□□ -0.75
COL6A3-211ENST00000491233 OR2A7Q96R45 310 aa10.34□□□□□ -0.75
COL6A3-211ENST00000491233 GPHA2Q96T91 129 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms