RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 DYRK1AQ13627 763 aa13.79□□□□□ -0.2
HMGN1-219ENST00000491183 CDK10Q15131 360 aa13.79□□□□□ -0.2
HMGN1-219ENST00000491183 ZNF343Q6P1L6 599 aa13.79□□□□□ -0.2
HMGN1-219ENST00000491183 OVCH2Q7RTZ1 564 aa13.79□□□□□ -0.2
HMGN1-219ENST00000491183 OR6Q1Q8NGQ2 317 aa13.79□□□□□ -0.2
HMGN1-219ENST00000491183 ACOT12Q8WYK0 555 aa13.79□□□□□ -0.2
HMGN1-219ENST00000491183 PHB2Q99623 299 aa13.79□□□□□ -0.2
HMGN1-219ENST00000491183 COA4Q9NYJ1 87 aa13.79□□□□□ -0.2
HMGN1-219ENST00000491183 PRELID3BQ9Y3B1 194 aa13.79□□□□□ -0.2
HMGN1-219ENST00000491183 U3KQK5 164 aa13.79□□□□□ -0.2
HMGN1-219ENST00000491183 TRBV12-3P01733 135 aa13.78□□□□□ -0.2
HMGN1-219ENST00000491183 OR9G9P0C7N8 305 aa13.78□□□□□ -0.2
HMGN1-219ENST00000491183 ZP3P21754 424 aa13.78□□□□□ -0.2
HMGN1-219ENST00000491183 TGFBR1P36897 503 aa13.78□□□□□ -0.2
HMGN1-219ENST00000491183 KLF5Q13887 457 aaPredicted RBP13.78□□□□□ -0.2
HMGN1-219ENST00000491183 C10orf55Q5SWW7 151 aa13.78□□□□□ -0.2
HMGN1-219ENST00000491183 HAPLN4Q86UW8 402 aa13.78□□□□□ -0.2
HMGN1-219ENST00000491183 HOGA1Q86XE5 327 aa13.78□□□□□ -0.2
HMGN1-219ENST00000491183 VKORC1L1Q8N0U8 176 aa13.78□□□□□ -0.2
HMGN1-219ENST00000491183 MFSD4AQ8N468 514 aa13.78□□□□□ -0.2
HMGN1-219ENST00000491183 BEST4Q8NFU0 473 aa13.78□□□□□ -0.2
HMGN1-219ENST00000491183 GPHA2Q96T91 129 aa13.78□□□□□ -0.2
HMGN1-219ENST00000491183 AUNIPQ9H7T9 357 aa13.78□□□□□ -0.2
HMGN1-219ENST00000491183 SPATA2Q9UM82 520 aa13.78□□□□□ -0.2
HMGN1-219ENST00000491183 A0A0A6YYH2 397 aa13.77□□□□□ -0.21
HMGN1-219ENST00000491183 A6NJ64 397 aa13.77□□□□□ -0.21
HMGN1-219ENST00000491183 USMG5Q96IX5 58 aa13.77□□□□□ -0.21
HMGN1-219ENST00000491183 HSD17B10Q99714 261 aaKnown RBP13.77□□□□□ -0.21
HMGN1-219ENST00000491183 ELOVL1Q9BW60 279 aa13.77□□□□□ -0.21
HMGN1-219ENST00000491183 PEF1Q9UBV8 284 aaKnown RBP13.77□□□□□ -0.21
HMGN1-219ENST00000491183 ADAM30Q9UKF2 790 aa13.77□□□□□ -0.21
HMGN1-219ENST00000491183 TRIM64CA6NLI5 447 aa13.76□□□□□ -0.21
HMGN1-219ENST00000491183 IGLV1-51P01701 117 aa13.76□□□□□ -0.21
HMGN1-219ENST00000491183 PRH1P02810 166 aa13.76□□□□□ -0.21
HMGN1-219ENST00000491183 FCER2P06734 321 aa13.76□□□□□ -0.21
HMGN1-219ENST00000491183 FCGR2CP31995 323 aa13.76□□□□□ -0.21
HMGN1-219ENST00000491183 ZNF45Q02386 682 aa13.76□□□□□ -0.21
HMGN1-219ENST00000491183 IL34Q6ZMJ4 242 aa13.76□□□□□ -0.21
HMGN1-219ENST00000491183 MMD2Q8IY49 270 aa13.76□□□□□ -0.21
HMGN1-219ENST00000491183 TCTEX1D2Q8WW35 142 aa13.76□□□□□ -0.21
HMGN1-219ENST00000491183 DIABLOQ9NR28 239 aa13.76□□□□□ -0.21
HMGN1-219ENST00000491183 CCL28Q9NRJ3 127 aa13.76□□□□□ -0.21
HMGN1-219ENST00000491183 TAS2R8Q9NYW2 309 aa13.76□□□□□ -0.21
HMGN1-219ENST00000491183 MRPS7Q9Y2R9 242 aaKnown RBP13.76□□□□□ -0.21
HMGN1-219ENST00000491183 TRBV9A0A0B4J1U6 114 aa13.75□□□□□ -0.21
HMGN1-219ENST00000491183 MPPED1O15442 326 aa13.75□□□□□ -0.21
HMGN1-219ENST00000491183 ACTL6BO94805 426 aa13.75□□□□□ -0.21
HMGN1-219ENST00000491183 RPS19P39019 145 aaKnown RBP13.75□□□□□ -0.21
HMGN1-219ENST00000491183 ARPC4P59998 168 aa13.75□□□□□ -0.21
HMGN1-219ENST00000491183 ZNF66Q6ZN08 573 aa13.75□□□□□ -0.21
HMGN1-219ENST00000491183 SBSPONQ8IVN8 264 aa13.75□□□□□ -0.21
HMGN1-219ENST00000491183 PUSL1Q8N0Z8 303 aaKnown RBP13.75□□□□□ -0.21
HMGN1-219ENST00000491183 TTC9CQ8N5M4 171 aa13.75□□□□□ -0.21
HMGN1-219ENST00000491183 OR4S2Q8NH73 311 aa13.75□□□□□ -0.21
HMGN1-219ENST00000491183 SNAPC3Q92966 411 aa13.75□□□□□ -0.21
HMGN1-219ENST00000491183 YIPF6Q96EC8 236 aa13.75□□□□□ -0.21
HMGN1-219ENST00000491183 SPIN2AQ99865 258 aa13.75□□□□□ -0.21
HMGN1-219ENST00000491183 SPIN2BQ9BPZ2 258 aa13.75□□□□□ -0.21
HMGN1-219ENST00000491183 AKIP1Q9NQ31 210 aa13.75□□□□□ -0.21
HMGN1-219ENST00000491183 HMX3A6NHT5 357 aa13.74□□□□□ -0.21
HMGN1-219ENST00000491183 E7EUB6 86 aa13.74□□□□□ -0.21
HMGN1-219ENST00000491183 CREBL2O60519 120 aaPredicted RBP13.74□□□□□ -0.21
HMGN1-219ENST00000491183 TMEM127O75204 238 aa13.74□□□□□ -0.21
HMGN1-219ENST00000491183 OR2A4O95047 310 aa13.74□□□□□ -0.21
HMGN1-219ENST00000491183 SYNJ2BPP57105 145 aa13.74□□□□□ -0.21
HMGN1-219ENST00000491183 RHOGP84095 191 aa13.74□□□□□ -0.21
HMGN1-219ENST00000491183 ANKRD13BQ86YJ7 626 aa13.74□□□□□ -0.21
HMGN1-219ENST00000491183 Q8N1Y9 231 aa13.74□□□□□ -0.21
HMGN1-219ENST00000491183 OR9G4Q8NGQ1 327 aa13.74□□□□□ -0.21
HMGN1-219ENST00000491183 OR13F1Q8NGS4 319 aa13.74□□□□□ -0.21
HMGN1-219ENST00000491183 SECTM1Q8WVN6 248 aa13.74□□□□□ -0.21
HMGN1-219ENST00000491183 OR2A7Q96R45 310 aa13.74□□□□□ -0.21
HMGN1-219ENST00000491183 RSRP1Q9BUV0 290 aa13.74□□□□□ -0.21
HMGN1-219ENST00000491183 A0A1B0GW64 132 aa13.73□□□□□ -0.21
HMGN1-219ENST00000491183 TEX22C9J3V5 150 aa13.73□□□□□ -0.21
HMGN1-219ENST00000491183 TNFSF12O43508 249 aa13.73□□□□□ -0.21
HMGN1-219ENST00000491183 AIREO43918 545 aa13.73□□□□□ -0.21
HMGN1-219ENST00000491183 PPYP01298 95 aa13.73□□□□□ -0.21
HMGN1-219ENST00000491183 IL6RP08887 468 aaPredicted RBP13.73□□□□□ -0.21
HMGN1-219ENST00000491183 FRMD6-AS1P0C7T7 363 aa13.73□□□□□ -0.21
HMGN1-219ENST00000491183 MSMO1Q15800 293 aa13.73□□□□□ -0.21
HMGN1-219ENST00000491183 TMEM167AQ8TBQ9 72 aa13.73□□□□□ -0.21
HMGN1-219ENST00000491183 MEIS3P1A6NDR6 274 aa13.72□□□□□ -0.21
HMGN1-219ENST00000491183 FAM223BA6NKX1 122 aa13.72□□□□□ -0.21
HMGN1-219ENST00000491183 XRCC3O43542 346 aa13.72□□□□□ -0.21
HMGN1-219ENST00000491183 KBTBD11O94819 623 aa13.72□□□□□ -0.21
HMGN1-219ENST00000491183 CSN3P07498 182 aa13.72□□□□□ -0.21
HMGN1-219ENST00000491183 LSM3P62310 102 aaKnown RBP13.72□□□□□ -0.21
HMGN1-219ENST00000491183 ATP5G2Q06055 141 aa13.72□□□□□ -0.21
HMGN1-219ENST00000491183 TIMM50Q3ZCQ8 353 aa13.72□□□□□ -0.21
HMGN1-219ENST00000491183 CROCCP3Q8IVE0 287 aa13.72□□□□□ -0.21
HMGN1-219ENST00000491183 FAM223AQ8IWN6 122 aa13.72□□□□□ -0.21
HMGN1-219ENST00000491183 TSPAN14Q8NG11 270 aa13.72□□□□□ -0.21
HMGN1-219ENST00000491183 OR5AP2Q8NGF4 316 aa13.72□□□□□ -0.21
HMGN1-219ENST00000491183 KMT2CQ8NEZ4 4911 aaKnown RBP13.71□□□□□ -0.21
HMGN1-219ENST00000491183 A0A087WXM4 84 aa13.71□□□□□ -0.21
HMGN1-219ENST00000491183 BMPR1BO00238 502 aa13.71□□□□□ -0.21
HMGN1-219ENST00000491183 MYOD1P15172 320 aa13.71□□□□□ -0.21
HMGN1-219ENST00000491183 CBX5P45973 191 aa13.71□□□□□ -0.21
HMGN1-219ENST00000491183 RPL27AP46776 148 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms