RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 PRELID3BQ9Y3B1 194 aa13.48□□□□□ -0.25
SHROOM1-205ENST00000488072 APELAP0DMC3 54 aa13.47□□□□□ -0.25
SHROOM1-205ENST00000488072 TBPP20226 339 aa13.47□□□□□ -0.25
SHROOM1-205ENST00000488072 LPAR6P43657 344 aa13.47□□□□□ -0.25
SHROOM1-205ENST00000488072 UCP3P55916 312 aa13.47□□□□□ -0.25
SHROOM1-205ENST00000488072 C10orf55Q5SWW7 151 aa13.47□□□□□ -0.25
SHROOM1-205ENST00000488072 SHISA2Q6UWI4 295 aa13.47□□□□□ -0.25
SHROOM1-205ENST00000488072 RNF5Q99942 180 aa13.47□□□□□ -0.25
SHROOM1-205ENST00000488072 A0A1W2PRX2 142 aa13.46□□□□□ -0.25
SHROOM1-205ENST00000488072 PSMB11A5LHX3 300 aa13.46□□□□□ -0.25
SHROOM1-205ENST00000488072 ADARB2-AS1A8MUL3 147 aa13.46□□□□□ -0.25
SHROOM1-205ENST00000488072 DISC1C4P0D8 188 aa13.46□□□□□ -0.25
SHROOM1-205ENST00000488072 RRASP10301 218 aa13.46□□□□□ -0.25
SHROOM1-205ENST00000488072 PTBP1P26599 531 aaKnown RBP eCLIP13.46□□□□□ -0.25
SHROOM1-205ENST00000488072 LGALS7P47929 136 aa13.46□□□□□ -0.25
SHROOM1-205ENST00000488072 MEF2DQ14814 521 aa13.46□□□□□ -0.25
SHROOM1-205ENST00000488072 ECSCRQ19T08 205 aa13.46□□□□□ -0.25
SHROOM1-205ENST00000488072 ZNF57Q68EA5 555 aaPredicted RBP13.46□□□□□ -0.25
SHROOM1-205ENST00000488072 SLC38A6Q8IZM9 456 aa13.46□□□□□ -0.25
SHROOM1-205ENST00000488072 OR4S2Q8NH73 311 aa13.46□□□□□ -0.25
SHROOM1-205ENST00000488072 ABHD5Q8WTS1 349 aa13.46□□□□□ -0.25
SHROOM1-205ENST00000488072 RTBDNQ9BSG5 229 aaPredicted RBP13.46□□□□□ -0.25
SHROOM1-205ENST00000488072 SLC2A9Q9NRM0 540 aa13.46□□□□□ -0.25
SHROOM1-205ENST00000488072 VSIG4Q9Y279 399 aa13.46□□□□□ -0.25
SHROOM1-205ENST00000488072 FBXO24O75426 580 aa13.45□□□□□ -0.26
SHROOM1-205ENST00000488072 IGKV1-39P01597 117 aa13.45□□□□□ -0.26
SHROOM1-205ENST00000488072 IGKV1D-39P04432 117 aa13.45□□□□□ -0.26
SHROOM1-205ENST00000488072 PIGPP57054 158 aa13.45□□□□□ -0.26
SHROOM1-205ENST00000488072 UBE2KP61086 200 aa13.45□□□□□ -0.26
SHROOM1-205ENST00000488072 CFHR3Q02985 330 aa13.45□□□□□ -0.26
SHROOM1-205ENST00000488072 NSUN5P1Q3KNT7 163 aa13.45□□□□□ -0.26
SHROOM1-205ENST00000488072 SP6Q3SY56 376 aa13.45□□□□□ -0.26
SHROOM1-205ENST00000488072 TOMM5Q8N4H5 51 aa13.45□□□□□ -0.26
SHROOM1-205ENST00000488072 ADAD2Q8NCV1 583 aaKnown RBP13.45□□□□□ -0.26
SHROOM1-205ENST00000488072 GRPEL2Q8TAA5 225 aa13.45□□□□□ -0.26
SHROOM1-205ENST00000488072 C5orf66Q9H5L9 145 aa13.45□□□□□ -0.26
SHROOM1-205ENST00000488072 ZNF430Q9H8G1 570 aaPredicted RBP13.45□□□□□ -0.26
SHROOM1-205ENST00000488072 BATF3Q9NR55 127 aa13.45□□□□□ -0.26
SHROOM1-205ENST00000488072 PRR13Q9NZ81 148 aa13.45□□□□□ -0.26
SHROOM1-205ENST00000488072 TRRAPQ9Y4A5 3859 aa13.44□□□□□ -0.26
SHROOM1-205ENST00000488072 E7EUB6 86 aa13.44□□□□□ -0.26
SHROOM1-205ENST00000488072 AP4M1O00189 453 aa13.44□□□□□ -0.26
SHROOM1-205ENST00000488072 SOX15O60248 233 aa13.44□□□□□ -0.26
SHROOM1-205ENST00000488072 SPDEFO95238 335 aa13.44□□□□□ -0.26
SHROOM1-205ENST00000488072 TSPAN15O95858 294 aa13.44□□□□□ -0.26
SHROOM1-205ENST00000488072 CATR1Q13166 79 aa13.44□□□□□ -0.26
SHROOM1-205ENST00000488072 CBX3Q13185 183 aa13.44□□□□□ -0.26
SHROOM1-205ENST00000488072 FXYD3Q14802 87 aa13.44□□□□□ -0.26
SHROOM1-205ENST00000488072 PRSS8Q16651 343 aa13.44□□□□□ -0.26
SHROOM1-205ENST00000488072 ASPHD1Q5U4P2 390 aa13.44□□□□□ -0.26
SHROOM1-205ENST00000488072 C19orf35Q6ZS72 473 aa13.44□□□□□ -0.26
SHROOM1-205ENST00000488072 PPP1R27Q86WC6 154 aa13.44□□□□□ -0.26
SHROOM1-205ENST00000488072 FOXRED2Q8IWF2 684 aa13.44□□□□□ -0.26
SHROOM1-205ENST00000488072 OSR1Q8TAX0 266 aaPredicted RBP13.44□□□□□ -0.26
SHROOM1-205ENST00000488072 TP53RKQ96S44 253 aa13.44□□□□□ -0.26
SHROOM1-205ENST00000488072 KLK15Q9H2R5 256 aa13.44□□□□□ -0.26
SHROOM1-205ENST00000488072 PTTG2Q9NZH5 202 aa13.44□□□□□ -0.26
SHROOM1-205ENST00000488072 CMYA5Q8N3K9 4069 aa13.44□□□□□ -0.26
SHROOM1-205ENST00000488072 A0A1B0GW64 132 aa13.43□□□□□ -0.26
SHROOM1-205ENST00000488072 MPPED1O15442 326 aa13.43□□□□□ -0.26
SHROOM1-205ENST00000488072 OPN1MWP04001 364 aa13.43□□□□□ -0.26
SHROOM1-205ENST00000488072 OPN1MW2P0DN77 364 aa13.43□□□□□ -0.26
SHROOM1-205ENST00000488072 OPN1MW3P0DN78 364 aa13.43□□□□□ -0.26
SHROOM1-205ENST00000488072 IL7P13232 177 aa13.43□□□□□ -0.26
SHROOM1-205ENST00000488072 F2RP25116 425 aa13.43□□□□□ -0.26
SHROOM1-205ENST00000488072 CCR6P51684 374 aa13.43□□□□□ -0.26
SHROOM1-205ENST00000488072 CD83Q01151 205 aa13.43□□□□□ -0.26
SHROOM1-205ENST00000488072 TNXAQ16473 311 aa13.43□□□□□ -0.26
SHROOM1-205ENST00000488072 IZUMO4Q1ZYL8 232 aa13.43□□□□□ -0.26
SHROOM1-205ENST00000488072 VMA21Q3ZAQ7 101 aa13.43□□□□□ -0.26
SHROOM1-205ENST00000488072 C19orf54Q5BKX5 351 aa13.43□□□□□ -0.26
SHROOM1-205ENST00000488072 OR4A47Q6IF82 309 aa13.43□□□□□ -0.26
SHROOM1-205ENST00000488072 CMTM1Q8IZ96 169 aa13.43□□□□□ -0.26
SHROOM1-205ENST00000488072 PUSL1Q8N0Z8 303 aaKnown RBP13.43□□□□□ -0.26
SHROOM1-205ENST00000488072 GDPD1Q8N9F7 314 aa13.43□□□□□ -0.26
SHROOM1-205ENST00000488072 TEX45Q8NA69 505 aa13.43□□□□□ -0.26
SHROOM1-205ENST00000488072 LFNGQ8NES3 379 aa13.43□□□□□ -0.26
SHROOM1-205ENST00000488072 TMEM230Q96A57 120 aa13.43□□□□□ -0.26
SHROOM1-205ENST00000488072 GPR132Q9UNW8 380 aa13.43□□□□□ -0.26
SHROOM1-205ENST00000488072 TRAV41A0A0B4J266 112 aa13.42□□□□□ -0.26
SHROOM1-205ENST00000488072 KCNAB3O43448 404 aa13.42□□□□□ -0.26
SHROOM1-205ENST00000488072 IGF1P05019 195 aa13.42□□□□□ -0.26
SHROOM1-205ENST00000488072 RPLP1P05386 114 aaKnown RBP13.42□□□□□ -0.26
SHROOM1-205ENST00000488072 CTSDP07339 412 aaPredicted RBP13.42□□□□□ -0.26
SHROOM1-205ENST00000488072 PPIFP30405 207 aaKnown RBP13.42□□□□□ -0.26
SHROOM1-205ENST00000488072 G6PCP35575 357 aa13.42□□□□□ -0.26
SHROOM1-205ENST00000488072 KIR2DS2P43631 304 aa13.42□□□□□ -0.26
SHROOM1-205ENST00000488072 DEFA5Q01523 94 aa13.42□□□□□ -0.26
SHROOM1-205ENST00000488072 TRIQKQ629K1 86 aa13.42□□□□□ -0.26
SHROOM1-205ENST00000488072 LPCAT3Q6P1A2 487 aa13.42□□□□□ -0.26
SHROOM1-205ENST00000488072 ZNF562Q6V9R5 426 aa13.42□□□□□ -0.26
SHROOM1-205ENST00000488072 CHPT1Q8WUD6 406 aa13.42□□□□□ -0.26
SHROOM1-205ENST00000488072 ARPC1AQ92747 370 aa13.42□□□□□ -0.26
SHROOM1-205ENST00000488072 R3HDM4Q96D70 268 aa13.42□□□□□ -0.26
SHROOM1-205ENST00000488072 RHOVQ96L33 236 aa13.42□□□□□ -0.26
SHROOM1-205ENST00000488072 NSG2Q9Y328 171 aa13.42□□□□□ -0.26
SHROOM1-205ENST00000488072 NUBP2Q9Y5Y2 271 aa13.42□□□□□ -0.26
SHROOM1-205ENST00000488072 TCRBV4S1A1TA0A5B7 111 aa13.41□□□□□ -0.26
SHROOM1-205ENST00000488072 PLA2G10O15496 165 aa13.41□□□□□ -0.26
SHROOM1-205ENST00000488072 RBFOX2O43251 390 aaKnown RBP eCLIP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms