RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 TPRP12270 2363 aaKnown RBP2.88□□□□□ -1.95
PTCD3-216ENST00000487043 USP24Q9UPU5 2620 aa2.88□□□□□ -1.95
PTCD3-216ENST00000487043 POLEQ07864 2286 aa2.88□□□□□ -1.95
PTCD3-216ENST00000487043 RP1L1Q8IWN7 2480 aaPredicted RBP2.87□□□□□ -1.95
PTCD3-216ENST00000487043 RTTNQ86VV8 2226 aa2.87□□□□□ -1.95
PTCD3-216ENST00000487043 IGSF10Q6WRI0 2623 aa2.87□□□□□ -1.95
PTCD3-216ENST00000487043 IGKV3D-20A0A0C4DH25 116 aa2.87□□□□□ -1.95
PTCD3-216ENST00000487043 A0A1B0GUH1 482 aa2.87□□□□□ -1.95
PTCD3-216ENST00000487043 LOC107986453A0A1B0GWG9 222 aa2.87□□□□□ -1.95
PTCD3-216ENST00000487043 C5orf63A6NC05 138 aa2.87□□□□□ -1.95
PTCD3-216ENST00000487043 F6UB75 175 aa2.87□□□□□ -1.95
PTCD3-216ENST00000487043 H3BSH0 61 aa2.87□□□□□ -1.95
PTCD3-216ENST00000487043 BOLA2-SMG1P6H3BVE0 249 aa2.87□□□□□ -1.95
PTCD3-216ENST00000487043 CHST1O43916 411 aa2.87□□□□□ -1.95
PTCD3-216ENST00000487043 DHRS3O75911 302 aa2.87□□□□□ -1.95
PTCD3-216ENST00000487043 CLPXO76031 633 aa2.87□□□□□ -1.95
PTCD3-216ENST00000487043 MAS1P04201 325 aa2.87□□□□□ -1.95
PTCD3-216ENST00000487043 CCL2P13500 99 aa2.87□□□□□ -1.95
PTCD3-216ENST00000487043 ZNF35P13682 527 aa2.87□□□□□ -1.95
PTCD3-216ENST00000487043 CCNOP22674 350 aa2.87□□□□□ -1.95
PTCD3-216ENST00000487043 TUBG1P23258 451 aa2.87□□□□□ -1.95
PTCD3-216ENST00000487043 IL32P24001 234 aa2.87□□□□□ -1.95
PTCD3-216ENST00000487043 CD1BP29016 333 aa2.87□□□□□ -1.95
PTCD3-216ENST00000487043 APLNRP35414 380 aa2.87□□□□□ -1.95
PTCD3-216ENST00000487043 FAM3AP98173 230 aa2.87□□□□□ -1.95
PTCD3-216ENST00000487043 HERPUD1Q15011 391 aa2.87□□□□□ -1.95
PTCD3-216ENST00000487043 SLC25A35Q3KQZ1 300 aa2.87□□□□□ -1.95
PTCD3-216ENST00000487043 FBXL19-AS1Q494R0 122 aa2.87□□□□□ -1.95
PTCD3-216ENST00000487043 GLYATL3Q5SZD4 288 aa2.87□□□□□ -1.95
PTCD3-216ENST00000487043 LCE1FQ5T754 118 aa2.87□□□□□ -1.95
PTCD3-216ENST00000487043 GLT8D1Q68CQ7 371 aa2.87□□□□□ -1.95
PTCD3-216ENST00000487043 LYPD6Q86Y78 171 aa2.87□□□□□ -1.95
PTCD3-216ENST00000487043 TGIF2LYQ8IUE0 185 aa2.87□□□□□ -1.95
PTCD3-216ENST00000487043 C1orf174Q8IYL3 243 aa2.87□□□□□ -1.95
PTCD3-216ENST00000487043 SLC30A7Q8NEW0 376 aa2.87□□□□□ -1.95
PTCD3-216ENST00000487043 OR1M1Q8NGA1 313 aa2.87□□□□□ -1.95
PTCD3-216ENST00000487043 OR5L1Q8NGL2 311 aa2.87□□□□□ -1.95
PTCD3-216ENST00000487043 OR6Q1Q8NGQ2 317 aa2.87□□□□□ -1.95
PTCD3-216ENST00000487043 LILRB4Q8NHJ6 448 aa2.87□□□□□ -1.95
PTCD3-216ENST00000487043 MCFD2Q8NI22 146 aa2.87□□□□□ -1.95
PTCD3-216ENST00000487043 GRPEL2Q8TAA5 225 aa2.87□□□□□ -1.95
PTCD3-216ENST00000487043 ACOT12Q8WYK0 555 aa2.87□□□□□ -1.95
PTCD3-216ENST00000487043 AP3S1Q92572 193 aa2.87□□□□□ -1.95
PTCD3-216ENST00000487043 S100PBPQ96BU1 408 aa2.87□□□□□ -1.95
PTCD3-216ENST00000487043 MUCL1Q96DR8 90 aa2.87□□□□□ -1.95
PTCD3-216ENST00000487043 ADAT3Q96EY9 351 aaPredicted RBP2.87□□□□□ -1.95
PTCD3-216ENST00000487043 REEP6Q96HR9 211 aa2.87□□□□□ -1.95
PTCD3-216ENST00000487043 OR5B12Q96R08 314 aa2.87□□□□□ -1.95
PTCD3-216ENST00000487043 C1QTNF6Q9BXI9 259 aa2.87□□□□□ -1.95
PTCD3-216ENST00000487043 TMEM138Q9NPI0 162 aa2.87□□□□□ -1.95
PTCD3-216ENST00000487043 TUBG2Q9NRH3 451 aa2.87□□□□□ -1.95
PTCD3-216ENST00000487043 ABRACLQ9P1F3 81 aa2.87□□□□□ -1.95
PTCD3-216ENST00000487043 CKLFQ9UBR5 152 aa2.87□□□□□ -1.95
PTCD3-216ENST00000487043 ING4Q9UNL4 249 aa2.87□□□□□ -1.95
PTCD3-216ENST00000487043 V9GYS6 101 aa2.87□□□□□ -1.95
PTCD3-216ENST00000487043 NBEAQ8NFP9 2946 aa2.87□□□□□ -1.95
PTCD3-216ENST00000487043 SPTA1P02549 2419 aa2.87□□□□□ -1.95
PTCD3-216ENST00000487043 TRAV8-7A0A075B6U6 113 aa2.86□□□□□ -1.95
PTCD3-216ENST00000487043 IGKV1D-13A0A0B4J2D9 117 aa2.86□□□□□ -1.95
PTCD3-216ENST00000487043 IGHV1-18A0A0C4DH31 117 aa2.86□□□□□ -1.95
PTCD3-216ENST00000487043 A6NIN4 97 aa2.86□□□□□ -1.95
PTCD3-216ENST00000487043 IFITM5A6NNB3 132 aa2.86□□□□□ -1.95
PTCD3-216ENST00000487043 FAM25AB3EWG3 89 aa2.86□□□□□ -1.95
PTCD3-216ENST00000487043 FAM25CB3EWG5 89 aa2.86□□□□□ -1.95
PTCD3-216ENST00000487043 FAM25GB3EWG6 89 aa2.86□□□□□ -1.95
PTCD3-216ENST00000487043 EEF1E1-BLOC1S5C9J1V9 151 aa2.86□□□□□ -1.95
PTCD3-216ENST00000487043 AIPO00170 330 aa2.86□□□□□ -1.95
PTCD3-216ENST00000487043 EEF1E1O43324 174 aaKnown RBP2.86□□□□□ -1.95
PTCD3-216ENST00000487043 SULT1B1O43704 296 aa2.86□□□□□ -1.95
PTCD3-216ENST00000487043 CST4P01036 141 aa2.86□□□□□ -1.95
PTCD3-216ENST00000487043 APOA1P02647 267 aa2.86□□□□□ -1.95
PTCD3-216ENST00000487043 CECR9P0C854 216 aa2.86□□□□□ -1.95
PTCD3-216ENST00000487043 CHTF8P0CG12 524 aa2.86□□□□□ -1.95
PTCD3-216ENST00000487043 IGKV1-13P0DP09 117 aa2.86□□□□□ -1.95
PTCD3-216ENST00000487043 ZNF250P15622 560 aa2.86□□□□□ -1.95
PTCD3-216ENST00000487043 ATF1P18846 271 aa2.86□□□□□ -1.95
PTCD3-216ENST00000487043 RAB3AP20336 220 aa2.86□□□□□ -1.95
PTCD3-216ENST00000487043 CD40LGP29965 261 aa2.86□□□□□ -1.95
PTCD3-216ENST00000487043 S100A5P33763 92 aa2.86□□□□□ -1.95
PTCD3-216ENST00000487043 ETV6P41212 452 aa2.86□□□□□ -1.95
PTCD3-216ENST00000487043 CDKN1BP46527 198 aa2.86□□□□□ -1.95
PTCD3-216ENST00000487043 IDH3GP51553 393 aaPredicted RBP2.86□□□□□ -1.95
PTCD3-216ENST00000487043 CAV2P51636 162 aa2.86□□□□□ -1.95
PTCD3-216ENST00000487043 CAV3P56539 151 aa2.86□□□□□ -1.95
PTCD3-216ENST00000487043 OR10A3P58181 314 aa2.86□□□□□ -1.95
PTCD3-216ENST00000487043 PPP3R1P63098 170 aa2.86□□□□□ -1.95
PTCD3-216ENST00000487043 PAX5Q02548 391 aa2.86□□□□□ -1.95
PTCD3-216ENST00000487043 ZNF92Q03936 586 aa2.86□□□□□ -1.95
PTCD3-216ENST00000487043 KIAA0087Q14695 138 aa2.86□□□□□ -1.95
PTCD3-216ENST00000487043 OR8B8Q15620 311 aa2.86□□□□□ -1.95
PTCD3-216ENST00000487043 KCNJ8Q15842 424 aa2.86□□□□□ -1.95
PTCD3-216ENST00000487043 IGFBP7Q16270 282 aa2.86□□□□□ -1.95
PTCD3-216ENST00000487043 IDNKQ5T6J7 187 aa2.86□□□□□ -1.95
PTCD3-216ENST00000487043 PLCXD3Q63HM9 321 aa2.86□□□□□ -1.95
PTCD3-216ENST00000487043 TMEM42Q69YG0 159 aa2.86□□□□□ -1.95
PTCD3-216ENST00000487043 SFXN4Q6P4A7 337 aa2.86□□□□□ -1.95
PTCD3-216ENST00000487043 FBXW12Q6X9E4 464 aa2.86□□□□□ -1.95
PTCD3-216ENST00000487043 Q6ZR54 194 aa2.86□□□□□ -1.95
PTCD3-216ENST00000487043 MRPL21Q7Z2W9 205 aaKnown RBP2.86□□□□□ -1.95
PTCD3-216ENST00000487043 AKAP14Q86UN6 197 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms