RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 MXD1Q05195 221 aa5.42□□□□□ -1.54
VPS50-218ENST00000485994 VMA21Q3ZAQ7 101 aa5.42□□□□□ -1.54
VPS50-218ENST00000485994 UNQ5815/PRO19632Q6UWF5 114 aa5.42□□□□□ -1.54
VPS50-218ENST00000485994 ZNF429Q86V71 674 aa5.42□□□□□ -1.54
VPS50-218ENST00000485994 MFSD4AQ8N468 514 aa5.42□□□□□ -1.54
VPS50-218ENST00000485994 OR5AP2Q8NGF4 316 aa5.42□□□□□ -1.54
VPS50-218ENST00000485994 NUDCD2Q8WVJ2 157 aa5.42□□□□□ -1.54
VPS50-218ENST00000485994 ARPC1AQ92747 370 aa5.42□□□□□ -1.54
VPS50-218ENST00000485994 SLC25A46Q96AG3 418 aa5.42□□□□□ -1.54
VPS50-218ENST00000485994 USMG5Q96IX5 58 aa5.42□□□□□ -1.54
VPS50-218ENST00000485994 HARBI1Q96MB7 349 aa5.42□□□□□ -1.54
VPS50-218ENST00000485994 AIFM2Q9BRQ8 373 aa5.42□□□□□ -1.54
VPS50-218ENST00000485994 MRPS26Q9BYN8 205 aaKnown RBP5.42□□□□□ -1.54
VPS50-218ENST00000485994 ANAPC10Q9UM13 185 aa5.42□□□□□ -1.54
VPS50-218ENST00000485994 WI2-2373I1.2A0A1W2PRP0 233 aa5.41□□□□□ -1.54
VPS50-218ENST00000485994 LINC01619G3V211 115 aa5.41□□□□□ -1.54
VPS50-218ENST00000485994 RBFOX2O43251 390 aaKnown RBP eCLIP5.41□□□□□ -1.54
VPS50-218ENST00000485994 CREBL2O60519 120 aaPredicted RBP5.41□□□□□ -1.54
VPS50-218ENST00000485994 CNIH1O95406 144 aa5.41□□□□□ -1.54
VPS50-218ENST00000485994 PRB2P02812 416 aaPredicted RBP5.41□□□□□ -1.54
VPS50-218ENST00000485994 IL6RP08887 468 aaPredicted RBP5.41□□□□□ -1.54
VPS50-218ENST00000485994 LGALS1P09382 135 aaKnown RBP5.41□□□□□ -1.54
VPS50-218ENST00000485994 NFYAP23511 347 aaPredicted RBP5.41□□□□□ -1.54
VPS50-218ENST00000485994 MAS1LP35410 378 aa5.41□□□□□ -1.54
VPS50-218ENST00000485994 KIR2DS2P43631 304 aa5.41□□□□□ -1.54
VPS50-218ENST00000485994 BRWD1-AS2P59051 145 aa5.41□□□□□ -1.54
VPS50-218ENST00000485994 PJVKQ0ZLH3 352 aa5.41□□□□□ -1.54
VPS50-218ENST00000485994 CDK10Q15131 360 aa5.41□□□□□ -1.54
VPS50-218ENST00000485994 PRSS8Q16651 343 aa5.41□□□□□ -1.54
VPS50-218ENST00000485994 UBE2NLQ5JXB2 153 aa5.41□□□□□ -1.54
VPS50-218ENST00000485994 ASPHD1Q5U4P2 390 aa5.41□□□□□ -1.54
VPS50-218ENST00000485994 ANKRD13BQ86YJ7 626 aa5.41□□□□□ -1.54
VPS50-218ENST00000485994 MMD2Q8IY49 270 aa5.41□□□□□ -1.54
VPS50-218ENST00000485994 PUSL1Q8N0Z8 303 aaKnown RBP5.41□□□□□ -1.54
VPS50-218ENST00000485994 TTC9CQ8N5M4 171 aa5.41□□□□□ -1.54
VPS50-218ENST00000485994 GVQW1Q8N7I0 195 aa5.41□□□□□ -1.54
VPS50-218ENST00000485994 POC5Q8NA72 575 aa5.41□□□□□ -1.54
VPS50-218ENST00000485994 VSTM2AQ8TAG5 236 aa5.41□□□□□ -1.54
VPS50-218ENST00000485994 ACOT12Q8WYK0 555 aa5.41□□□□□ -1.54
VPS50-218ENST00000485994 DUX3Q96PT4 197 aa5.41□□□□□ -1.54
VPS50-218ENST00000485994 CLCC1Q96S66 551 aa5.41□□□□□ -1.54
VPS50-218ENST00000485994 TINAGL1Q9GZM7 467 aaPredicted RBP5.41□□□□□ -1.54
VPS50-218ENST00000485994 NAA50Q9GZZ1 169 aaKnown RBP5.41□□□□□ -1.54
VPS50-218ENST00000485994 GNB4Q9HAV0 340 aa5.41□□□□□ -1.54
VPS50-218ENST00000485994 RANGRFQ9HD47 186 aaPredicted RBP5.41□□□□□ -1.54
VPS50-218ENST00000485994 ADAM30Q9UKF2 790 aa5.41□□□□□ -1.54
VPS50-218ENST00000485994 LSM4Q9Y4Z0 139 aaKnown RBP5.41□□□□□ -1.54
VPS50-218ENST00000485994 COL7A1Q02388 2944 aa5.41□□□□□ -1.54
VPS50-218ENST00000485994 TRBV9A0A0B4J1U6 114 aa5.4□□□□□ -1.54
VPS50-218ENST00000485994 IGKV1D-13A0A0B4J2D9 117 aa5.4□□□□□ -1.54
VPS50-218ENST00000485994 MSGN1A6NI15 193 aa5.4□□□□□ -1.54
VPS50-218ENST00000485994 SEC14L6B5MCN3 397 aa5.4□□□□□ -1.54
VPS50-218ENST00000485994 SULT1C2O00338 296 aa5.4□□□□□ -1.54
VPS50-218ENST00000485994 OVOL1O14753 267 aa5.4□□□□□ -1.54
VPS50-218ENST00000485994 CRYZL1O95825 349 aa5.4□□□□□ -1.54
VPS50-218ENST00000485994 HRASP01112 189 aa5.4□□□□□ -1.54
VPS50-218ENST00000485994 PPYP01298 95 aa5.4□□□□□ -1.54
VPS50-218ENST00000485994 APOA1P02647 267 aa5.4□□□□□ -1.54
VPS50-218ENST00000485994 IGKV1-13P0DP09 117 aa5.4□□□□□ -1.54
VPS50-218ENST00000485994 FCGR2CP31995 323 aa5.4□□□□□ -1.54
VPS50-218ENST00000485994 ARPC4P59998 168 aa5.4□□□□□ -1.54
VPS50-218ENST00000485994 GNB1P62873 340 aa5.4□□□□□ -1.54
VPS50-218ENST00000485994 RPL30P62888 115 aaKnown RBP5.4□□□□□ -1.54
VPS50-218ENST00000485994 ECSCRQ19T08 205 aa5.4□□□□□ -1.54
VPS50-218ENST00000485994 DEFB136Q30KP8 78 aa5.4□□□□□ -1.54
VPS50-218ENST00000485994 FAM209BQ5JX69 171 aa5.4□□□□□ -1.54
VPS50-218ENST00000485994 ZNF343Q6P1L6 599 aa5.4□□□□□ -1.54
VPS50-218ENST00000485994 ACSM6Q6P461 480 aa5.4□□□□□ -1.54
VPS50-218ENST00000485994 SLC25A42Q86VD7 318 aa5.4□□□□□ -1.54
VPS50-218ENST00000485994 OR4A5Q8NH83 315 aa5.4□□□□□ -1.54
VPS50-218ENST00000485994 TMEM167AQ8TBQ9 72 aa5.4□□□□□ -1.54
VPS50-218ENST00000485994 CD300LFQ8TDQ1 290 aa5.4□□□□□ -1.54
VPS50-218ENST00000485994 DCUN1D4Q92564 292 aa5.4□□□□□ -1.54
VPS50-218ENST00000485994 DLX4Q92988 240 aaPredicted RBP5.4□□□□□ -1.54
VPS50-218ENST00000485994 BORCS5Q969J3 196 aa5.4□□□□□ -1.54
VPS50-218ENST00000485994 SPIN2AQ99865 258 aa5.4□□□□□ -1.54
VPS50-218ENST00000485994 B9D2Q9BPU9 175 aa5.4□□□□□ -1.54
VPS50-218ENST00000485994 SPIN2BQ9BPZ2 258 aa5.4□□□□□ -1.54
VPS50-218ENST00000485994 FAM103A1Q9BTL3 118 aaKnown RBP5.4□□□□□ -1.54
VPS50-218ENST00000485994 FUNDC2Q9BWH2 189 aa5.4□□□□□ -1.54
VPS50-218ENST00000485994 MRPS7Q9Y2R9 242 aaKnown RBP5.4□□□□□ -1.54
VPS50-218ENST00000485994 SMIM31A0A1B0GVY4 71 aa5.39□□□□□ -1.55
VPS50-218ENST00000485994 FCGR3BO75015 233 aa5.39□□□□□ -1.55
VPS50-218ENST00000485994 OR2A4O95047 310 aa5.39□□□□□ -1.55
VPS50-218ENST00000485994 HPRT1P00492 218 aa5.39□□□□□ -1.55
VPS50-218ENST00000485994 TRGV3P03979 118 aa5.39□□□□□ -1.55
VPS50-218ENST00000485994 OR9G9P0C7N8 305 aa5.39□□□□□ -1.55
VPS50-218ENST00000485994 NHLRC4P0CG21 123 aaPredicted RBP5.39□□□□□ -1.55
VPS50-218ENST00000485994 SAA1P0DJI8 122 aaPredicted RBP5.39□□□□□ -1.55
VPS50-218ENST00000485994 ZP3P21754 424 aa5.39□□□□□ -1.55
VPS50-218ENST00000485994 GNRHRP30968 328 aa5.39□□□□□ -1.55
VPS50-218ENST00000485994 HOXD3P31249 432 aaPredicted RBP5.39□□□□□ -1.55
VPS50-218ENST00000485994 PRSS3P35030 304 aa5.39□□□□□ -1.55
VPS50-218ENST00000485994 RORCP51449 518 aa5.39□□□□□ -1.55
VPS50-218ENST00000485994 TAS2R20P59543 309 aa5.39□□□□□ -1.55
VPS50-218ENST00000485994 DYRK1AQ13627 763 aa5.39□□□□□ -1.55
VPS50-218ENST00000485994 KLF5Q13887 457 aaPredicted RBP5.39□□□□□ -1.55
VPS50-218ENST00000485994 CTF1Q16619 201 aa5.39□□□□□ -1.55
VPS50-218ENST00000485994 POU2AF1Q16633 256 aa5.39□□□□□ -1.55
VPS50-218ENST00000485994 DEFB121Q5J5C9 76 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms