RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 RBM11P57052 281 aaKnown RBP1.79□□□□□ -2.12
SMC4-215ENST00000484799 TAS2R30P59541 319 aa1.79□□□□□ -2.12
SMC4-215ENST00000484799 PSME3P61289 254 aa1.79□□□□□ -2.12
SMC4-215ENST00000484799 CTAG1AP78358 180 aa1.79□□□□□ -2.12
SMC4-215ENST00000484799 REEP5Q00765 189 aa1.79□□□□□ -2.12
SMC4-215ENST00000484799 PSG4Q00888 419 aa1.79□□□□□ -2.12
SMC4-215ENST00000484799 AESQ08117 197 aa1.79□□□□□ -2.12
SMC4-215ENST00000484799 SRSF6Q13247 344 aaKnown RBP1.79□□□□□ -2.12
SMC4-215ENST00000484799 SPA17Q15506 151 aa1.79□□□□□ -2.12
SMC4-215ENST00000484799 LGALS9BQ3B8N2 356 aa1.79□□□□□ -2.12
SMC4-215ENST00000484799 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.79□□□□□ -2.12
SMC4-215ENST00000484799 LGALS9CQ6DKI2 356 aa1.79□□□□□ -2.12
SMC4-215ENST00000484799 MSRB3Q8IXL7 192 aa1.79□□□□□ -2.12
SMC4-215ENST00000484799 LRRC25Q8N386 305 aaPredicted RBP1.79□□□□□ -2.12
SMC4-215ENST00000484799 CLDN22Q8N7P3 220 aa1.79□□□□□ -2.12
SMC4-215ENST00000484799 DAND5Q8N907 189 aa1.79□□□□□ -2.12
SMC4-215ENST00000484799 OR4C16Q8NGL9 310 aa1.79□□□□□ -2.12
SMC4-215ENST00000484799 LHFPL5Q8TAF8 219 aa1.79□□□□□ -2.12
SMC4-215ENST00000484799 RAB2BQ8WUD1 216 aa1.79□□□□□ -2.12
SMC4-215ENST00000484799 MIEN1Q9BRT3 115 aa1.79□□□□□ -2.12
SMC4-215ENST00000484799 AICDAQ9GZX7 198 aa1.79□□□□□ -2.12
SMC4-215ENST00000484799 TUBA4BQ9H853 241 aa1.79□□□□□ -2.12
SMC4-215ENST00000484799 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.79□□□□□ -2.12
SMC4-215ENST00000484799 ANGPT4Q9Y264 503 aa1.79□□□□□ -2.12
SMC4-215ENST00000484799 NCOA1Q15788 1441 aa1.79□□□□□ -2.12
SMC4-215ENST00000484799 NLRC5Q86WI3 1866 aa1.79□□□□□ -2.12
SMC4-215ENST00000484799 CACNA1SQ13698 1873 aa1.78□□□□□ -2.12
SMC4-215ENST00000484799 NUP160Q12769 1436 aa1.78□□□□□ -2.12
SMC4-215ENST00000484799 A0A087WUU8 490 aa1.78□□□□□ -2.12
SMC4-215ENST00000484799 C19orf71A6NCJ1 209 aa1.78□□□□□ -2.12
SMC4-215ENST00000484799 OR5K4A6NMS3 321 aa1.78□□□□□ -2.12
SMC4-215ENST00000484799 EEF1E1-BLOC1S5C9J1V9 151 aa1.78□□□□□ -2.12
SMC4-215ENST00000484799 ZNF878C9JN71 531 aa1.78□□□□□ -2.12
SMC4-215ENST00000484799 PSMD12O00232 456 aaPredicted RBP1.78□□□□□ -2.12
SMC4-215ENST00000484799 SOD1P00441 154 aa1.78□□□□□ -2.12
SMC4-215ENST00000484799 TCRBP04435 133 aa1.78□□□□□ -2.12
SMC4-215ENST00000484799 UCHL1P09936 223 aa1.78□□□□□ -2.12
SMC4-215ENST00000484799 LGALS3P17931 250 aaKnown RBP1.78□□□□□ -2.12
SMC4-215ENST00000484799 SERPINB10P48595 397 aa1.78□□□□□ -2.12
SMC4-215ENST00000484799 CDK9P50750 372 aaKnown RBP1.78□□□□□ -2.12
SMC4-215ENST00000484799 AP1S1P61966 158 aa1.78□□□□□ -2.12
SMC4-215ENST00000484799 LSM6P62312 80 aaKnown RBP1.78□□□□□ -2.12
SMC4-215ENST00000484799 POLR2GP62487 172 aaKnown RBP eCLIP1.78□□□□□ -2.12
SMC4-215ENST00000484799 TNFAIP6P98066 277 aaPredicted RBP1.78□□□□□ -2.12
SMC4-215ENST00000484799 AKR1C1Q04828 323 aa1.78□□□□□ -2.12
SMC4-215ENST00000484799 PMAIP1Q13794 54 aa1.78□□□□□ -2.12
SMC4-215ENST00000484799 FAM229BQ4G0N7 80 aa1.78□□□□□ -2.12
SMC4-215ENST00000484799 SMARCD3Q6STE5 483 aa1.78□□□□□ -2.12
SMC4-215ENST00000484799 GPHB5Q86YW7 130 aa1.78□□□□□ -2.12
SMC4-215ENST00000484799 C20orf196Q8IYI0 205 aa1.78□□□□□ -2.12
SMC4-215ENST00000484799 UMODL1-AS1Q8N2C9 162 aa1.78□□□□□ -2.12
SMC4-215ENST00000484799 TMEM86BQ8N661 226 aa1.78□□□□□ -2.12
SMC4-215ENST00000484799 CNEP1R1Q8N9A8 125 aa1.78□□□□□ -2.12
SMC4-215ENST00000484799 OR1L8Q8NGR8 309 aa1.78□□□□□ -2.12
SMC4-215ENST00000484799 CLDND2Q8NHS1 167 aa1.78□□□□□ -2.12
SMC4-215ENST00000484799 RPS4Y2Q8TD47 263 aa1.78□□□□□ -2.12
SMC4-215ENST00000484799 DCUN1D1Q96GG9 259 aa1.78□□□□□ -2.12
SMC4-215ENST00000484799 PSTPIP2Q9H939 334 aa1.78□□□□□ -2.12
SMC4-215ENST00000484799 XAGE1AQ9HD64 81 aa1.78□□□□□ -2.12
SMC4-215ENST00000484799 ZNF407Q9C0G0 2248 aa1.78□□□□□ -2.13
SMC4-215ENST00000484799 DSCAMO60469 2012 aa1.78□□□□□ -2.13
SMC4-215ENST00000484799 ITGB4P16144 1822 aa1.77□□□□□ -2.13
SMC4-215ENST00000484799 SHANK3Q9BYB0 1731 aa1.77□□□□□ -2.13
SMC4-215ENST00000484799 PQLC2LA1A4F0 135 aa1.77□□□□□ -2.13
SMC4-215ENST00000484799 ATP5HO75947 161 aa1.77□□□□□ -2.13
SMC4-215ENST00000484799 KCNE1P15382 129 aa1.77□□□□□ -2.13
SMC4-215ENST00000484799 BLVRBP30043 206 aaPredicted RBP1.77□□□□□ -2.13
SMC4-215ENST00000484799 HAAOP46952 286 aa1.77□□□□□ -2.13
SMC4-215ENST00000484799 XCL1P47992 114 aa1.77□□□□□ -2.13
SMC4-215ENST00000484799 FXYD7P58549 80 aa1.77□□□□□ -2.13
SMC4-215ENST00000484799 MRPS25P82663 173 aaKnown RBP1.77□□□□□ -2.13
SMC4-215ENST00000484799 IFITM2Q01629 132 aa1.77□□□□□ -2.13
SMC4-215ENST00000484799 TNFRSF9Q07011 255 aa1.77□□□□□ -2.13
SMC4-215ENST00000484799 EDDM3AQ14507 147 aa1.77□□□□□ -2.13
SMC4-215ENST00000484799 ACOT6Q3I5F7 207 aaPredicted RBP1.77□□□□□ -2.13
SMC4-215ENST00000484799 GLT8D1Q68CQ7 371 aa1.77□□□□□ -2.13
SMC4-215ENST00000484799 ZNF767PQ75MW2 155 aa1.77□□□□□ -2.13
SMC4-215ENST00000484799 OR5C1Q8NGR4 320 aa1.77□□□□□ -2.13
SMC4-215ENST00000484799 OR13C8Q8NGS7 320 aa1.77□□□□□ -2.13
SMC4-215ENST00000484799 SMCR5Q8TEV8 140 aa1.77□□□□□ -2.13
SMC4-215ENST00000484799 ANKRD7Q92527 254 aa1.77□□□□□ -2.13
SMC4-215ENST00000484799 SFRP2Q96HF1 295 aa1.77□□□□□ -2.13
SMC4-215ENST00000484799 CNBD2Q96M20 576 aa1.77□□□□□ -2.13
SMC4-215ENST00000484799 C20orf166-AS1Q96NR2 134 aa1.77□□□□□ -2.13
SMC4-215ENST00000484799 PECRQ9BY49 303 aa1.77□□□□□ -2.13
SMC4-215ENST00000484799 C16orf95Q9H693 158 aa1.77□□□□□ -2.13
SMC4-215ENST00000484799 CXorf21Q9HAI6 301 aa1.77□□□□□ -2.13
SMC4-215ENST00000484799 RSL24D1Q9UHA3 163 aaKnown RBP1.77□□□□□ -2.13
SMC4-215ENST00000484799 PRELID1Q9Y255 219 aa1.77□□□□□ -2.13
SMC4-215ENST00000484799 COQ4Q9Y3A0 265 aa1.77□□□□□ -2.13
SMC4-215ENST00000484799 GRIN2BQ13224 1484 aa1.76□□□□□ -2.13
SMC4-215ENST00000484799 C2orf74A8MZ97 194 aa1.76□□□□□ -2.13
SMC4-215ENST00000484799 LST1O00453 97 aa1.76□□□□□ -2.13
SMC4-215ENST00000484799 CHP2O43745 196 aa1.76□□□□□ -2.13
SMC4-215ENST00000484799 ZNF73O43830 326 aaPredicted RBP1.76□□□□□ -2.13
SMC4-215ENST00000484799 IFNA6P05013 189 aa1.76□□□□□ -2.13
SMC4-215ENST00000484799 FUSP35637 526 aaKnown RBP eCLIP1.76□□□□□ -2.13
SMC4-215ENST00000484799 OR4D2P58180 307 aa1.76□□□□□ -2.13
SMC4-215ENST00000484799 RANP62826 216 aaKnown RBP1.76□□□□□ -2.13
SMC4-215ENST00000484799 TMED2Q15363 201 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms