RNA–Protein interactions for RNA: ENST00000481980.1

NUP58-212, Transcript of nucleoporin 58, humanhuman

TSL 3

Gene NUP58, Length 605 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-212ENST00000481980 CATR1Q13166 79 aa13.16□□□□□ -0.3
NUP58-212ENST00000481980 EBI3Q14213 229 aa13.16□□□□□ -0.3
NUP58-212ENST00000481980 TEX38Q6PEX7 206 aa13.16□□□□□ -0.3
NUP58-212ENST00000481980 SLC25A48Q6ZT89 311 aaKnown RBP13.16□□□□□ -0.3
NUP58-212ENST00000481980 C5orf24Q7Z6I8 188 aa13.16□□□□□ -0.3
NUP58-212ENST00000481980 TMED4Q7Z7H5 227 aa13.16□□□□□ -0.3
NUP58-212ENST00000481980 CENPSQ8N2Z9 138 aa13.16□□□□□ -0.3
NUP58-212ENST00000481980 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.16□□□□□ -0.3
NUP58-212ENST00000481980 DUX3Q96PT4 197 aa13.16□□□□□ -0.3
NUP58-212ENST00000481980 FXYD6Q9H0Q3 95 aa13.16□□□□□ -0.3
NUP58-212ENST00000481980 C20orf85Q9H1P6 137 aa13.16□□□□□ -0.3
NUP58-212ENST00000481980 OR5H14A6NHG9 310 aa13.15□□□□□ -0.3
NUP58-212ENST00000481980 TXNL1O43396 289 aa13.15□□□□□ -0.3
NUP58-212ENST00000481980 GAPDHP04406 335 aaKnown RBP13.15□□□□□ -0.3
NUP58-212ENST00000481980 ZNF816Q0VGE8 651 aaPredicted RBP13.15□□□□□ -0.3
NUP58-212ENST00000481980 CBX3Q13185 183 aa13.15□□□□□ -0.3
NUP58-212ENST00000481980 MSMO1Q15800 293 aa13.15□□□□□ -0.3
NUP58-212ENST00000481980 LHFPL1Q86WI0 220 aa13.15□□□□□ -0.3
NUP58-212ENST00000481980 TGIF2LXQ8IUE1 241 aa13.15□□□□□ -0.3
NUP58-212ENST00000481980 LINC00311Q8N616 119 aa13.15□□□□□ -0.3
NUP58-212ENST00000481980 MARCH1Q8TCQ1 289 aa13.15□□□□□ -0.3
NUP58-212ENST00000481980 EAF1Q96JC9 268 aaPredicted RBP13.15□□□□□ -0.3
NUP58-212ENST00000481980 NUDT15Q9NV35 164 aa13.15□□□□□ -0.3
NUP58-212ENST00000481980 RNF150Q9ULK6 438 aa13.15□□□□□ -0.3
NUP58-212ENST00000481980 IGHV1-3A0A0C4DH29 117 aa13.14□□□□□ -0.31
NUP58-212ENST00000481980 A0A1W2PPE3 182 aa13.14□□□□□ -0.31
NUP58-212ENST00000481980 NCBP2LA6PVI3 153 aaKnown RBP13.14□□□□□ -0.31
NUP58-212ENST00000481980 AP4M1O00189 453 aa13.14□□□□□ -0.31
NUP58-212ENST00000481980 TCRBP04435 133 aa13.14□□□□□ -0.31
NUP58-212ENST00000481980 CTSDP07339 412 aaPredicted RBP13.14□□□□□ -0.31
NUP58-212ENST00000481980 ANXA3P12429 323 aa13.14□□□□□ -0.31
NUP58-212ENST00000481980 RAB25P57735 213 aa13.14□□□□□ -0.31
NUP58-212ENST00000481980 ZNF660Q6AZW8 331 aaPredicted RBP13.14□□□□□ -0.31
NUP58-212ENST00000481980 FAM71F2Q6NXP2 309 aa13.14□□□□□ -0.31
NUP58-212ENST00000481980 NRARPQ7Z6K4 114 aa13.14□□□□□ -0.31
NUP58-212ENST00000481980 MOB3BQ86TA1 216 aa13.14□□□□□ -0.31
NUP58-212ENST00000481980 Q8N6K4 173 aa13.14□□□□□ -0.31
NUP58-212ENST00000481980 OR13C8Q8NGS7 320 aa13.14□□□□□ -0.31
NUP58-212ENST00000481980 LSM4Q9Y4Z0 139 aaKnown RBP13.14□□□□□ -0.31
NUP58-212ENST00000481980 TEX13DA0A0J9YY54 714 aaPredicted RBP13.13□□□□□ -0.31
NUP58-212ENST00000481980 M0R1X1 148 aa13.13□□□□□ -0.31
NUP58-212ENST00000481980 ARPC1BO15143 372 aaKnown RBP13.13□□□□□ -0.31
NUP58-212ENST00000481980 RPLP1P05386 114 aaKnown RBP13.13□□□□□ -0.31
NUP58-212ENST00000481980 H2AFB2P0C5Z0 115 aa13.13□□□□□ -0.31
NUP58-212ENST00000481980 REG1BP48304 166 aa13.13□□□□□ -0.31
NUP58-212ENST00000481980 CT45A1Q5HYN5 189 aa13.13□□□□□ -0.31
NUP58-212ENST00000481980 AADACL3Q5VUY0 350 aa13.13□□□□□ -0.31
NUP58-212ENST00000481980 ZNF439Q8NDP4 499 aa13.13□□□□□ -0.31
NUP58-212ENST00000481980 OR2T10Q8NGZ9 312 aa13.13□□□□□ -0.31
NUP58-212ENST00000481980 CT45A3Q8NHU0 189 aa13.13□□□□□ -0.31
NUP58-212ENST00000481980 ABHD14BQ96IU4 210 aa13.13□□□□□ -0.31
NUP58-212ENST00000481980 ADTRPQ96IZ2 230 aa13.13□□□□□ -0.31
NUP58-212ENST00000481980 GON7Q9BXV9 100 aa13.13□□□□□ -0.31
NUP58-212ENST00000481980 IFI27L2Q9H2X8 130 aa13.13□□□□□ -0.31
NUP58-212ENST00000481980 CCL28Q9NRJ3 127 aa13.13□□□□□ -0.31
NUP58-212ENST00000481980 LIN7CQ9NUP9 197 aaKnown RBP13.13□□□□□ -0.31
NUP58-212ENST00000481980 PRELID3BQ9Y3B1 194 aa13.13□□□□□ -0.31
NUP58-212ENST00000481980 U3KQK5 164 aa13.13□□□□□ -0.31
NUP58-212ENST00000481980 TRAV6A0A075B6T7 132 aa13.12□□□□□ -0.31
NUP58-212ENST00000481980 SAA2-SAA4A0A096LPE2 208 aa13.12□□□□□ -0.31
NUP58-212ENST00000481980 IGHV3-72A0A0B4J1Y9 119 aa13.12□□□□□ -0.31
NUP58-212ENST00000481980 PIGBOS1A0A0B4J2F0 54 aa13.12□□□□□ -0.31
NUP58-212ENST00000481980 SLC31A2O15432 143 aa13.12□□□□□ -0.31
NUP58-212ENST00000481980 DHFRP00374 187 aa13.12□□□□□ -0.31
NUP58-212ENST00000481980 SAA2P0DJI9 122 aaPredicted RBP13.12□□□□□ -0.31
NUP58-212ENST00000481980 BTCP35070 178 aa13.12□□□□□ -0.31
NUP58-212ENST00000481980 CDX1P47902 265 aaPredicted RBP13.12□□□□□ -0.31
NUP58-212ENST00000481980 PIGPP57054 158 aa13.12□□□□□ -0.31
NUP58-212ENST00000481980 FOXE3Q13461 319 aa13.12□□□□□ -0.31
NUP58-212ENST00000481980 C4orf46Q504U0 113 aa13.12□□□□□ -0.31
NUP58-212ENST00000481980 PHLDA2Q53GA4 152 aa13.12□□□□□ -0.31
NUP58-212ENST00000481980 CXorf66Q5JRM2 361 aaPredicted RBP13.12□□□□□ -0.31
NUP58-212ENST00000481980 ZNF66Q6ZN08 573 aa13.12□□□□□ -0.31
NUP58-212ENST00000481980 SGPP2Q8IWX5 399 aa13.12□□□□□ -0.31
NUP58-212ENST00000481980 RNF152Q8N8N0 203 aa13.12□□□□□ -0.31
NUP58-212ENST00000481980 Q8N9W7 124 aa13.12□□□□□ -0.31
NUP58-212ENST00000481980 OR5M8Q8NGP6 311 aa13.12□□□□□ -0.31
NUP58-212ENST00000481980 HSD17B10Q99714 261 aaKnown RBP13.12□□□□□ -0.31
NUP58-212ENST00000481980 RSRP1Q9BUV0 290 aa13.12□□□□□ -0.31
NUP58-212ENST00000481980 PARP12Q9H0J9 701 aaKnown RBP13.12□□□□□ -0.31
NUP58-212ENST00000481980 SLC2A9Q9NRM0 540 aa13.12□□□□□ -0.31
NUP58-212ENST00000481980 KCNIP3Q9Y2W7 256 aa13.12□□□□□ -0.31
NUP58-212ENST00000481980 DNAH7Q8WXX0 4024 aa13.12□□□□□ -0.31
NUP58-212ENST00000481980 IGKV1D-13A0A0B4J2D9 117 aa13.11□□□□□ -0.31
NUP58-212ENST00000481980 APOA2P02652 100 aa13.11□□□□□ -0.31
NUP58-212ENST00000481980 IGKV1-13P0DP09 117 aa13.11□□□□□ -0.31
NUP58-212ENST00000481980 AKR1C4P17516 323 aa13.11□□□□□ -0.31
NUP58-212ENST00000481980 UBE2MP61081 183 aaKnown RBP13.11□□□□□ -0.31
NUP58-212ENST00000481980 DEFB136Q30KP8 78 aa13.11□□□□□ -0.31
NUP58-212ENST00000481980 C9orf66Q5T8R8 295 aa13.11□□□□□ -0.31
NUP58-212ENST00000481980 FAM53AQ6NSI3 398 aaPredicted RBP13.11□□□□□ -0.31
NUP58-212ENST00000481980 LCNL1Q6ZST4 164 aa13.11□□□□□ -0.31
NUP58-212ENST00000481980 KCTD9Q7L273 389 aa13.11□□□□□ -0.31
NUP58-212ENST00000481980 DUSP18Q8NEJ0 188 aa13.11□□□□□ -0.31
NUP58-212ENST00000481980 TCTEX1D2Q8WW35 142 aa13.11□□□□□ -0.31
NUP58-212ENST00000481980 GPN1Q9HCN4 374 aaPredicted RBP13.11□□□□□ -0.31
NUP58-212ENST00000481980 PLSCR3Q9NRY6 295 aa13.11□□□□□ -0.31
NUP58-212ENST00000481980 GAB2Q9UQC2 676 aa13.11□□□□□ -0.31
NUP58-212ENST00000481980 INMT-MINDY4F8WBC2 141 aa13.1□□□□□ -0.31
NUP58-212ENST00000481980 TNFSF12O43508 249 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms