RNA–Protein interactions for RNA: ENST00000481484.1

VPS13D-208, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 360 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-208ENST00000481484 ARHGAP5-AS1Q96IT6 56 aa3.19□□□□□ -1.9
VPS13D-208ENST00000481484 ABHD14BQ96IU4 210 aa3.19□□□□□ -1.9
VPS13D-208ENST00000481484 MGLLQ99685 303 aa3.19□□□□□ -1.9
VPS13D-208ENST00000481484 SPIN2AQ99865 258 aa3.19□□□□□ -1.9
VPS13D-208ENST00000481484 SPIN2BQ9BPZ2 258 aa3.19□□□□□ -1.9
VPS13D-208ENST00000481484 FAAP24Q9BTP7 215 aa3.19□□□□□ -1.9
VPS13D-208ENST00000481484 PECRQ9BY49 303 aa3.19□□□□□ -1.9
VPS13D-208ENST00000481484 TINAGL1Q9GZM7 467 aaPredicted RBP3.19□□□□□ -1.9
VPS13D-208ENST00000481484 C11orf54Q9H0W9 315 aaPredicted RBP3.19□□□□□ -1.9
VPS13D-208ENST00000481484 DCSTAMPQ9H295 470 aa3.19□□□□□ -1.9
VPS13D-208ENST00000481484 KLK15Q9H2R5 256 aa3.19□□□□□ -1.9
VPS13D-208ENST00000481484 Q9H521 79 aa3.19□□□□□ -1.9
VPS13D-208ENST00000481484 PALMDQ9NP74 551 aa3.19□□□□□ -1.9
VPS13D-208ENST00000481484 PRELID3BQ9Y3B1 194 aa3.19□□□□□ -1.9
VPS13D-208ENST00000481484 FBXO7Q9Y3I1 522 aa3.19□□□□□ -1.9
VPS13D-208ENST00000481484 NUBP2Q9Y5Y2 271 aa3.19□□□□□ -1.9
VPS13D-208ENST00000481484 WSB1Q9Y6I7 421 aa3.19□□□□□ -1.9
VPS13D-208ENST00000481484 A3GALT2U3KPV4 340 aa3.19□□□□□ -1.9
VPS13D-208ENST00000481484 DNAH1Q9P2D7 4330 aa3.18□□□□□ -1.9
VPS13D-208ENST00000481484 A0A0A6YYH2 397 aa3.18□□□□□ -1.9
VPS13D-208ENST00000481484 TMEM272A0A1B0GTI8 110 aa3.18□□□□□ -1.9
VPS13D-208ENST00000481484 A6NJ64 397 aa3.18□□□□□ -1.9
VPS13D-208ENST00000481484 IFITM5A6NNB3 132 aa3.18□□□□□ -1.9
VPS13D-208ENST00000481484 PTGES3LE9PB15 166 aa3.18□□□□□ -1.9
VPS13D-208ENST00000481484 BET1O15155 118 aa3.18□□□□□ -1.9
VPS13D-208ENST00000481484 MPPED1O15442 326 aa3.18□□□□□ -1.9
VPS13D-208ENST00000481484 SOCS1O15524 211 aa3.18□□□□□ -1.9
VPS13D-208ENST00000481484 CYB5BO43169 146 aa3.18□□□□□ -1.9
VPS13D-208ENST00000481484 SOX15O60248 233 aa3.18□□□□□ -1.9
VPS13D-208ENST00000481484 OR9G9P0C7N8 305 aa3.18□□□□□ -1.9
VPS13D-208ENST00000481484 FRMD6-AS1P0C7T7 363 aa3.18□□□□□ -1.9
VPS13D-208ENST00000481484 GSTT2P0CG29 244 aa3.18□□□□□ -1.9
VPS13D-208ENST00000481484 GSTT2BP0CG30 244 aa3.18□□□□□ -1.9
VPS13D-208ENST00000481484 SPNP16150 400 aa3.18□□□□□ -1.9
VPS13D-208ENST00000481484 RAB3BP20337 219 aa3.18□□□□□ -1.9
VPS13D-208ENST00000481484 MAS1LP35410 378 aa3.18□□□□□ -1.9
VPS13D-208ENST00000481484 TALDO1P37837 337 aa3.18□□□□□ -1.9
VPS13D-208ENST00000481484 RPS16P62249 146 aaKnown RBP3.18□□□□□ -1.9
VPS13D-208ENST00000481484 RPS25P62851 125 aaKnown RBP3.18□□□□□ -1.9
VPS13D-208ENST00000481484 ARFRP1Q13795 201 aa3.18□□□□□ -1.9
VPS13D-208ENST00000481484 CDK10Q15131 360 aa3.18□□□□□ -1.9
VPS13D-208ENST00000481484 RPEL1Q2QD12 228 aa3.18□□□□□ -1.9
VPS13D-208ENST00000481484 OR10K2Q6IF99 312 aa3.18□□□□□ -1.9
VPS13D-208ENST00000481484 FAM53AQ6NSI3 398 aaPredicted RBP3.18□□□□□ -1.9
VPS13D-208ENST00000481484 GLDNQ6ZMI3 551 aaPredicted RBP3.18□□□□□ -1.9
VPS13D-208ENST00000481484 TMEM91Q6ZNR0 172 aa3.18□□□□□ -1.9
VPS13D-208ENST00000481484 KCTD9Q7L273 389 aa3.18□□□□□ -1.9
VPS13D-208ENST00000481484 TPRA1Q86W33 373 aa3.18□□□□□ -1.9
VPS13D-208ENST00000481484 ZNF645Q8N7E2 425 aa3.18□□□□□ -1.9
VPS13D-208ENST00000481484 ZNF383Q8NA42 475 aa3.18□□□□□ -1.9
VPS13D-208ENST00000481484 NECAP1Q8NC96 275 aa3.18□□□□□ -1.9
VPS13D-208ENST00000481484 NUDT10Q8NFP7 164 aa3.18□□□□□ -1.9
VPS13D-208ENST00000481484 OR9G4Q8NGQ1 327 aa3.18□□□□□ -1.9
VPS13D-208ENST00000481484 OR10R2Q8NGX6 335 aa3.18□□□□□ -1.9
VPS13D-208ENST00000481484 SRSF12Q8WXF0 261 aaKnown RBP3.18□□□□□ -1.9
VPS13D-208ENST00000481484 DDB2Q92466 427 aa3.18□□□□□ -1.9
VPS13D-208ENST00000481484 SNAPC3Q92966 411 aa3.18□□□□□ -1.9
VPS13D-208ENST00000481484 DLX4Q92988 240 aaPredicted RBP3.18□□□□□ -1.9
VPS13D-208ENST00000481484 NUDT11Q96G61 164 aa3.18□□□□□ -1.9
VPS13D-208ENST00000481484 OR5B12Q96R08 314 aa3.18□□□□□ -1.9
VPS13D-208ENST00000481484 PHB2Q99623 299 aa3.18□□□□□ -1.9
VPS13D-208ENST00000481484 HSD17B10Q99714 261 aaKnown RBP3.18□□□□□ -1.9
VPS13D-208ENST00000481484 TM2D3Q9BRN9 247 aa3.18□□□□□ -1.9
VPS13D-208ENST00000481484 AIFM2Q9BRQ8 373 aa3.18□□□□□ -1.9
VPS13D-208ENST00000481484 HDHD3Q9BSH5 251 aaPredicted RBP3.18□□□□□ -1.9
VPS13D-208ENST00000481484 PARP12Q9H0J9 701 aaKnown RBP3.18□□□□□ -1.9
VPS13D-208ENST00000481484 KCNK15Q9H427 330 aa3.18□□□□□ -1.9
VPS13D-208ENST00000481484 ZNF355PQ9NSJ1 428 aa3.18□□□□□ -1.9
VPS13D-208ENST00000481484 SDHAF2Q9NX18 166 aa3.18□□□□□ -1.9
VPS13D-208ENST00000481484 COA4Q9NYJ1 87 aa3.18□□□□□ -1.9
VPS13D-208ENST00000481484 OR1A1Q9P1Q5 309 aa3.18□□□□□ -1.9
VPS13D-208ENST00000481484 ZNF257Q9Y2Q1 563 aa3.18□□□□□ -1.9
VPS13D-208ENST00000481484 RBM7Q9Y580 266 aaKnown RBP3.18□□□□□ -1.9
VPS13D-208ENST00000481484 IGKV1-6A0A0C4DH72 117 aa3.17□□□□□ -1.9
VPS13D-208ENST00000481484 TRDV1A0A1B0GX56 115 aa3.17□□□□□ -1.9
VPS13D-208ENST00000481484 NPIPB5A8MRT5 1133 aa3.17□□□□□ -1.9
VPS13D-208ENST00000481484 A8MWP6 167 aa3.17□□□□□ -1.9
VPS13D-208ENST00000481484 RAB27BO00194 218 aa3.17□□□□□ -1.9
VPS13D-208ENST00000481484 RBFOX2O43251 390 aaKnown RBP eCLIP3.17□□□□□ -1.9
VPS13D-208ENST00000481484 JTBO76095 146 aa3.17□□□□□ -1.9
VPS13D-208ENST00000481484 KBTBD11O94819 623 aa3.17□□□□□ -1.9
VPS13D-208ENST00000481484 CRYZL1O95825 349 aa3.17□□□□□ -1.9
VPS13D-208ENST00000481484 HRASP01112 189 aa3.17□□□□□ -1.9
VPS13D-208ENST00000481484 IGLV2-23P01705 113 aa3.17□□□□□ -1.9
VPS13D-208ENST00000481484 IGHV3-11P01762 117 aa3.17□□□□□ -1.9
VPS13D-208ENST00000481484 IFNA6P05013 189 aa3.17□□□□□ -1.9
VPS13D-208ENST00000481484 SCTP09683 121 aa3.17□□□□□ -1.9
VPS13D-208ENST00000481484 SAA1P0DJI8 122 aaPredicted RBP3.17□□□□□ -1.9
VPS13D-208ENST00000481484 IGHV4-30-4P0DP06 118 aa3.17□□□□□ -1.9
VPS13D-208ENST00000481484 EGR2P11161 476 aaPredicted RBP3.17□□□□□ -1.9
VPS13D-208ENST00000481484 LYL1P12980 280 aa3.17□□□□□ -1.9
VPS13D-208ENST00000481484 HIST1H1BP16401 226 aaKnown RBP3.17□□□□□ -1.9
VPS13D-208ENST00000481484 FGF9P31371 208 aaPredicted RBP3.17□□□□□ -1.9
VPS13D-208ENST00000481484 DUTP33316 252 aaKnown RBP3.17□□□□□ -1.9
VPS13D-208ENST00000481484 GNG2P59768 71 aa3.17□□□□□ -1.9
VPS13D-208ENST00000481484 SUMO1P63165 101 aaKnown RBP3.17□□□□□ -1.9
VPS13D-208ENST00000481484 FABP5Q01469 135 aa3.17□□□□□ -1.9
VPS13D-208ENST00000481484 CATR1Q13166 79 aa3.17□□□□□ -1.9
VPS13D-208ENST00000481484 DYRK1AQ13627 763 aa3.17□□□□□ -1.9
VPS13D-208ENST00000481484 EXOSC2Q13868 293 aaKnown RBP3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms