RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 KCTD21Q4G0X4 260 aa14.2□□□□□ -0.14
COL7A1-209ENST00000474432 SRSF12Q8WXF0 261 aaKnown RBP14.2□□□□□ -0.14
COL7A1-209ENST00000474432 ADAM30Q9UKF2 790 aa14.2□□□□□ -0.14
COL7A1-209ENST00000474432 TRAV18A0A075B6X5 111 aa14.19□□□□□ -0.14
COL7A1-209ENST00000474432 LOC100506127A0A0U1RQW1 187 aa14.19□□□□□ -0.14
COL7A1-209ENST00000474432 PTHLHP12272 177 aa14.19□□□□□ -0.14
COL7A1-209ENST00000474432 AADACP22760 399 aa14.19□□□□□ -0.14
COL7A1-209ENST00000474432 ZNF45Q02386 682 aa14.19□□□□□ -0.14
COL7A1-209ENST00000474432 CDK10Q15131 360 aa14.19□□□□□ -0.14
COL7A1-209ENST00000474432 NEDD8Q15843 81 aa14.19□□□□□ -0.14
COL7A1-209ENST00000474432 OR2B11Q5JQS5 317 aa14.19□□□□□ -0.14
COL7A1-209ENST00000474432 C10orf55Q5SWW7 151 aa14.19□□□□□ -0.14
COL7A1-209ENST00000474432 KCTD9Q7L273 389 aa14.19□□□□□ -0.14
COL7A1-209ENST00000474432 SBSPONQ8IVN8 264 aa14.19□□□□□ -0.14
COL7A1-209ENST00000474432 Q8N1Y9 231 aa14.19□□□□□ -0.14
COL7A1-209ENST00000474432 GVQW1Q8N7I0 195 aa14.19□□□□□ -0.14
COL7A1-209ENST00000474432 OR6Q1Q8NGQ2 317 aa14.19□□□□□ -0.14
COL7A1-209ENST00000474432 GPHA2Q96T91 129 aa14.19□□□□□ -0.14
COL7A1-209ENST00000474432 ETV7Q9Y603 341 aa14.19□□□□□ -0.14
COL7A1-209ENST00000474432 RYR3Q15413 4870 aa14.19□□□□□ -0.14
COL7A1-209ENST00000474432 OR9G9P0C7N8 305 aa14.18□□□□□ -0.14
COL7A1-209ENST00000474432 ZP3P21754 424 aa14.18□□□□□ -0.14
COL7A1-209ENST00000474432 TGFBR1P36897 503 aa14.18□□□□□ -0.14
COL7A1-209ENST00000474432 IDNKQ5T6J7 187 aa14.18□□□□□ -0.14
COL7A1-209ENST00000474432 HOGA1Q86XE5 327 aa14.18□□□□□ -0.14
COL7A1-209ENST00000474432 VKORC1L1Q8N0U8 176 aa14.18□□□□□ -0.14
COL7A1-209ENST00000474432 OR4C12Q96R67 309 aa14.18□□□□□ -0.14
COL7A1-209ENST00000474432 COA4Q9NYJ1 87 aa14.18□□□□□ -0.14
COL7A1-209ENST00000474432 TRBV9A0A0B4J1U6 114 aa14.17□□□□□ -0.14
COL7A1-209ENST00000474432 A0A1B0GW64 132 aa14.17□□□□□ -0.14
COL7A1-209ENST00000474432 E7EUB6 86 aa14.17□□□□□ -0.14
COL7A1-209ENST00000474432 SLC22A5O76082 557 aa14.17□□□□□ -0.14
COL7A1-209ENST00000474432 PRH1P02810 166 aa14.17□□□□□ -0.14
COL7A1-209ENST00000474432 PUSL1Q8N0Z8 303 aaKnown RBP14.17□□□□□ -0.14
COL7A1-209ENST00000474432 MFSD4AQ8N468 514 aa14.17□□□□□ -0.14
COL7A1-209ENST00000474432 BEST4Q8NFU0 473 aa14.17□□□□□ -0.14
COL7A1-209ENST00000474432 ACOT12Q8WYK0 555 aa14.17□□□□□ -0.14
COL7A1-209ENST00000474432 USMG5Q96IX5 58 aa14.17□□□□□ -0.14
COL7A1-209ENST00000474432 AUNIPQ9H7T9 357 aa14.17□□□□□ -0.14
COL7A1-209ENST00000474432 AKIP1Q9NQ31 210 aa14.17□□□□□ -0.14
COL7A1-209ENST00000474432 PEF1Q9UBV8 284 aaKnown RBP14.17□□□□□ -0.14
COL7A1-209ENST00000474432 A0A0A6YYH2 397 aa14.16□□□□□ -0.14
COL7A1-209ENST00000474432 A6NJ64 397 aa14.16□□□□□ -0.14
COL7A1-209ENST00000474432 TEX22C9J3V5 150 aa14.16□□□□□ -0.14
COL7A1-209ENST00000474432 FRMD6-AS1P0C7T7 363 aa14.16□□□□□ -0.14
COL7A1-209ENST00000474432 MMD2Q8IY49 270 aa14.16□□□□□ -0.14
COL7A1-209ENST00000474432 TTC9CQ8N5M4 171 aa14.16□□□□□ -0.14
COL7A1-209ENST00000474432 OR9G4Q8NGQ1 327 aa14.16□□□□□ -0.14
COL7A1-209ENST00000474432 SNAPC3Q92966 411 aa14.16□□□□□ -0.14
COL7A1-209ENST00000474432 PHB2Q99623 299 aa14.16□□□□□ -0.14
COL7A1-209ENST00000474432 HSD17B10Q99714 261 aaKnown RBP14.16□□□□□ -0.14
COL7A1-209ENST00000474432 ELOVL1Q9BW60 279 aa14.16□□□□□ -0.14
COL7A1-209ENST00000474432 CCL28Q9NRJ3 127 aa14.16□□□□□ -0.14
COL7A1-209ENST00000474432 PRELID3BQ9Y3B1 194 aa14.16□□□□□ -0.14
COL7A1-209ENST00000474432 IL6RP08887 468 aaPredicted RBP14.15□□□□□ -0.14
COL7A1-209ENST00000474432 SYNJ2BPP57105 145 aa14.15□□□□□ -0.14
COL7A1-209ENST00000474432 RHOGP84095 191 aa14.15□□□□□ -0.14
COL7A1-209ENST00000474432 TMEM167AQ8TBQ9 72 aa14.15□□□□□ -0.14
COL7A1-209ENST00000474432 DCUN1D5Q9BTE7 237 aa14.15□□□□□ -0.14
COL7A1-209ENST00000474432 TAS2R8Q9NYW2 309 aa14.15□□□□□ -0.14
COL7A1-209ENST00000474432 SPATA2Q9UM82 520 aa14.15□□□□□ -0.14
COL7A1-209ENST00000474432 DMRT1Q9Y5R6 373 aa14.15□□□□□ -0.14
COL7A1-209ENST00000474432 HMX3A6NHT5 357 aa14.14□□□□□ -0.15
COL7A1-209ENST00000474432 CSN3P07498 182 aa14.14□□□□□ -0.15
COL7A1-209ENST00000474432 FCGR2CP31995 323 aa14.14□□□□□ -0.15
COL7A1-209ENST00000474432 MECP2P51608 486 aaKnown RBP14.14□□□□□ -0.15
COL7A1-209ENST00000474432 C19orf35Q6ZS72 473 aa14.14□□□□□ -0.15
COL7A1-209ENST00000474432 TCTEX1D2Q8WW35 142 aa14.14□□□□□ -0.15
COL7A1-209ENST00000474432 YIPF6Q96EC8 236 aa14.14□□□□□ -0.15
COL7A1-209ENST00000474432 THAP7Q9BT49 309 aaPredicted RBP14.14□□□□□ -0.15
COL7A1-209ENST00000474432 MRPS7Q9Y2R9 242 aaKnown RBP14.14□□□□□ -0.15
COL7A1-209ENST00000474432 CGB1A6NKQ9 187 aa14.13□□□□□ -0.15
COL7A1-209ENST00000474432 BMPR1BO00238 502 aa14.13□□□□□ -0.15
COL7A1-209ENST00000474432 KBTBD11O94819 623 aa14.13□□□□□ -0.15
COL7A1-209ENST00000474432 OR2A4O95047 310 aa14.13□□□□□ -0.15
COL7A1-209ENST00000474432 FCER2P06734 321 aa14.13□□□□□ -0.15
COL7A1-209ENST00000474432 RPS19P39019 145 aaKnown RBP14.13□□□□□ -0.15
COL7A1-209ENST00000474432 MSMO1Q15800 293 aa14.13□□□□□ -0.15
COL7A1-209ENST00000474432 ADAMTSL5Q6ZMM2 481 aa14.13□□□□□ -0.15
COL7A1-209ENST00000474432 ZNF66Q6ZN08 573 aa14.13□□□□□ -0.15
COL7A1-209ENST00000474432 OR13F1Q8NGS4 319 aa14.13□□□□□ -0.15
COL7A1-209ENST00000474432 OR4S2Q8NH73 311 aa14.13□□□□□ -0.15
COL7A1-209ENST00000474432 OR2A7Q96R45 310 aa14.13□□□□□ -0.15
COL7A1-209ENST00000474432 SPIN2AQ99865 258 aa14.13□□□□□ -0.15
COL7A1-209ENST00000474432 SPIN2BQ9BPZ2 258 aa14.13□□□□□ -0.15
COL7A1-209ENST00000474432 RSRP1Q9BUV0 290 aa14.13□□□□□ -0.15
COL7A1-209ENST00000474432 FAM223BA6NKX1 122 aa14.12□□□□□ -0.15
COL7A1-209ENST00000474432 MPPED1O15442 326 aa14.12□□□□□ -0.15
COL7A1-209ENST00000474432 TMEM127O75204 238 aa14.12□□□□□ -0.15
COL7A1-209ENST00000474432 PPYP01298 95 aa14.12□□□□□ -0.15
COL7A1-209ENST00000474432 MYOD1P15172 320 aa14.12□□□□□ -0.15
COL7A1-209ENST00000474432 ARPC4P59998 168 aa14.12□□□□□ -0.15
COL7A1-209ENST00000474432 ANKRD13BQ86YJ7 626 aa14.12□□□□□ -0.15
COL7A1-209ENST00000474432 FAM223AQ8IWN6 122 aa14.12□□□□□ -0.15
COL7A1-209ENST00000474432 SECTM1Q8WVN6 248 aa14.12□□□□□ -0.15
COL7A1-209ENST00000474432 C19orf73Q9NVV2 129 aa14.12□□□□□ -0.15
COL7A1-209ENST00000474432 SIGLEC8Q9NYZ4 499 aa14.12□□□□□ -0.15
COL7A1-209ENST00000474432 DNAH7Q8WXX0 4024 aa14.12□□□□□ -0.15
COL7A1-209ENST00000474432 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.11□□□□□ -0.15
COL7A1-209ENST00000474432 TNFSF12O43508 249 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms