RNA–Protein interactions for RNA: ENST00000474006.1

CCDC93-207, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-207ENST00000474006 GALNT14Q96FL9 552 aa6.08□□□□□ -1.44
CCDC93-207ENST00000474006 ZNF48Q96MX3 618 aaPredicted RBP6.08□□□□□ -1.44
CCDC93-207ENST00000474006 TP53RKQ96S44 253 aa6.08□□□□□ -1.44
CCDC93-207ENST00000474006 PRDM13Q9H4Q3 707 aa6.08□□□□□ -1.44
CCDC93-207ENST00000474006 SLC35D1Q9NTN3 355 aa6.08□□□□□ -1.44
CCDC93-207ENST00000474006 WASHC3Q9Y3C0 194 aa6.08□□□□□ -1.44
CCDC93-207ENST00000474006 ACANP16112 2415 aa6.08□□□□□ -1.44
CCDC93-207ENST00000474006 CREBBPQ92793 2442 aa6.08□□□□□ -1.44
CCDC93-207ENST00000474006 KIAA2026Q5HYC2 2103 aa6.07□□□□□ -1.44
CCDC93-207ENST00000474006 C9orf170A2RU37 121 aa6.07□□□□□ -1.44
CCDC93-207ENST00000474006 H0Y980 276 aa6.07□□□□□ -1.44
CCDC93-207ENST00000474006 B3GALNT1O75752 331 aa6.07□□□□□ -1.44
CCDC93-207ENST00000474006 VENTXO95231 258 aa6.07□□□□□ -1.44
CCDC93-207ENST00000474006 SFT2D2O95562 160 aa6.07□□□□□ -1.44
CCDC93-207ENST00000474006 DHFRP00374 187 aa6.07□□□□□ -1.44
CCDC93-207ENST00000474006 HPRT1P00492 218 aa6.07□□□□□ -1.44
CCDC93-207ENST00000474006 MOSP00540 346 aa6.07□□□□□ -1.44
CCDC93-207ENST00000474006 IGKV1D-33P01593 117 aa6.07□□□□□ -1.44
CCDC93-207ENST00000474006 IGKV1-33P01594 117 aa6.07□□□□□ -1.44
CCDC93-207ENST00000474006 APOA2P02652 100 aa6.07□□□□□ -1.44
CCDC93-207ENST00000474006 SERPINE2P07093 398 aa6.07□□□□□ -1.44
CCDC93-207ENST00000474006 SNRNP70P08621 437 aaKnown RBP6.07□□□□□ -1.44
CCDC93-207ENST00000474006 OR5AC1P0C628 307 aa6.07□□□□□ -1.44
CCDC93-207ENST00000474006 KIR2DS2P43631 304 aa6.07□□□□□ -1.44
CCDC93-207ENST00000474006 IER3P46695 156 aa6.07□□□□□ -1.44
CCDC93-207ENST00000474006 ARHGDIBP52566 201 aa6.07□□□□□ -1.44
CCDC93-207ENST00000474006 RPS16P62249 146 aaKnown RBP6.07□□□□□ -1.44
CCDC93-207ENST00000474006 DHRS2Q13268 280 aa6.07□□□□□ -1.44
CCDC93-207ENST00000474006 EBI3Q14213 229 aa6.07□□□□□ -1.44
CCDC93-207ENST00000474006 HES1Q14469 280 aa6.07□□□□□ -1.44
CCDC93-207ENST00000474006 TMEM187Q14656 261 aa6.07□□□□□ -1.44
CCDC93-207ENST00000474006 SLC9A3R2Q15599 337 aa6.07□□□□□ -1.44
CCDC93-207ENST00000474006 AANATQ16613 207 aa6.07□□□□□ -1.44
CCDC93-207ENST00000474006 RTL8BQ17RB0 113 aa6.07□□□□□ -1.44
CCDC93-207ENST00000474006 LRRC75BQ2VPJ9 315 aa6.07□□□□□ -1.44
CCDC93-207ENST00000474006 FBLN7Q53RD9 439 aa6.07□□□□□ -1.44
CCDC93-207ENST00000474006 TCTEX1D1Q8N7M0 179 aa6.07□□□□□ -1.44
CCDC93-207ENST00000474006 MINDY2Q8NBR6 621 aa6.07□□□□□ -1.44
CCDC93-207ENST00000474006 OR52B4Q8NGK2 314 aa6.07□□□□□ -1.44
CCDC93-207ENST00000474006 CD300LFQ8TDQ1 290 aa6.07□□□□□ -1.44
CCDC93-207ENST00000474006 CASTOR1Q8WTX7 329 aa6.07□□□□□ -1.44
CCDC93-207ENST00000474006 RNF5Q99942 180 aa6.07□□□□□ -1.44
CCDC93-207ENST00000474006 SEC22CQ9BRL7 303 aa6.07□□□□□ -1.44
CCDC93-207ENST00000474006 TMEM222Q9H0R3 208 aa6.07□□□□□ -1.44
CCDC93-207ENST00000474006 ABCA2Q9BZC7 2435 aa6.07□□□□□ -1.44
CCDC93-207ENST00000474006 CR1P17927 2039 aa6.06□□□□□ -1.44
CCDC93-207ENST00000474006 RBFOX2O43251 390 aaKnown RBP eCLIP6.06□□□□□ -1.44
CCDC93-207ENST00000474006 CRLF1O75462 422 aa6.06□□□□□ -1.44
CCDC93-207ENST00000474006 CDS2O95674 445 aa6.06□□□□□ -1.44
CCDC93-207ENST00000474006 CRYZL1O95825 349 aa6.06□□□□□ -1.44
CCDC93-207ENST00000474006 KRASP01116 189 aa6.06□□□□□ -1.44
CCDC93-207ENST00000474006 IGKV1-39P01597 117 aa6.06□□□□□ -1.44
CCDC93-207ENST00000474006 IGHV4-59P01825 116 aa6.06□□□□□ -1.44
CCDC93-207ENST00000474006 HLA-AP01891 365 aaKnown RBP6.06□□□□□ -1.44
CCDC93-207ENST00000474006 IGKV1D-39P04432 117 aa6.06□□□□□ -1.44
CCDC93-207ENST00000474006 ANXA3P12429 323 aa6.06□□□□□ -1.44
CCDC93-207ENST00000474006 UCP1P25874 307 aa6.06□□□□□ -1.44
CCDC93-207ENST00000474006 LGALS7P47929 136 aa6.06□□□□□ -1.44
CCDC93-207ENST00000474006 F2RL1P55085 397 aa6.06□□□□□ -1.44
CCDC93-207ENST00000474006 CD83Q01151 205 aa6.06□□□□□ -1.44
CCDC93-207ENST00000474006 CBX3Q13185 183 aa6.06□□□□□ -1.44
CCDC93-207ENST00000474006 SCGB2A2Q13296 93 aa6.06□□□□□ -1.44
CCDC93-207ENST00000474006 LY6EQ16553 131 aa6.06□□□□□ -1.44
CCDC93-207ENST00000474006 ANKRD55Q3KP44 614 aa6.06□□□□□ -1.44
CCDC93-207ENST00000474006 RBMS3Q6XE24 437 aaKnown RBP6.06□□□□□ -1.44
CCDC93-207ENST00000474006 LYG2Q86SG7 212 aa6.06□□□□□ -1.44
CCDC93-207ENST00000474006 PDPNQ86YL7 162 aa6.06□□□□□ -1.44
CCDC93-207ENST00000474006 SELENOHQ8IZQ5 122 aaKnown RBP6.06□□□□□ -1.44
CCDC93-207ENST00000474006 STPG3Q8N7X2 389 aa6.06□□□□□ -1.44
CCDC93-207ENST00000474006 OR4C13Q8NGP0 309 aa6.06□□□□□ -1.44
CCDC93-207ENST00000474006 OR2T10Q8NGZ9 312 aa6.06□□□□□ -1.44
CCDC93-207ENST00000474006 OR4S2Q8NH73 311 aa6.06□□□□□ -1.44
CCDC93-207ENST00000474006 ZNF431Q8TF32 576 aaPredicted RBP6.06□□□□□ -1.44
CCDC93-207ENST00000474006 TMEM56Q96MV1 263 aa6.06□□□□□ -1.44
CCDC93-207ENST00000474006 PLEKHA2Q9HB19 425 aa6.06□□□□□ -1.44
CCDC93-207ENST00000474006 PLSCR3Q9NRY6 295 aa6.06□□□□□ -1.44
CCDC93-207ENST00000474006 TNFRSF19Q9NS68 423 aa6.06□□□□□ -1.44
CCDC93-207ENST00000474006 FAM212BQ9NTI7 297 aaPredicted RBP6.06□□□□□ -1.44
CCDC93-207ENST00000474006 LIN7CQ9NUP9 197 aaKnown RBP6.06□□□□□ -1.44
CCDC93-207ENST00000474006 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.06□□□□□ -1.44
CCDC93-207ENST00000474006 TMEM56-RWDD3S4R434 201 aa6.06□□□□□ -1.44
CCDC93-207ENST00000474006 ABCA1O95477 2261 aa6.06□□□□□ -1.44
CCDC93-207ENST00000474006 A6NDX4 124 aa6.05□□□□□ -1.44
CCDC93-207ENST00000474006 SNRPGP15A8MWD9 76 aa6.05□□□□□ -1.44
CCDC93-207ENST00000474006 H3BUX3 64 aa6.05□□□□□ -1.44
CCDC93-207ENST00000474006 HOXA3O43365 443 aaPredicted RBP6.05□□□□□ -1.44
CCDC93-207ENST00000474006 PRAF2O60831 178 aa6.05□□□□□ -1.44
CCDC93-207ENST00000474006 S1PR2O95136 353 aa6.05□□□□□ -1.44
CCDC93-207ENST00000474006 DUS4LO95620 317 aaKnown RBP6.05□□□□□ -1.44
CCDC93-207ENST00000474006 RPA2P15927 270 aa6.05□□□□□ -1.44
CCDC93-207ENST00000474006 NQO2P16083 231 aa6.05□□□□□ -1.44
CCDC93-207ENST00000474006 TMEM11P17152 192 aa6.05□□□□□ -1.44
CCDC93-207ENST00000474006 CNTFRP26992 372 aa6.05□□□□□ -1.44
CCDC93-207ENST00000474006 G6PCP35575 357 aa6.05□□□□□ -1.44
CCDC93-207ENST00000474006 TATDN3Q17R31 274 aa6.05□□□□□ -1.44
CCDC93-207ENST00000474006 DHRS7BQ6IAN0 325 aaPredicted RBP6.05□□□□□ -1.44
CCDC93-207ENST00000474006 LIN54Q6MZP7 749 aa6.05□□□□□ -1.44
CCDC93-207ENST00000474006 LYZL2Q7Z4W2 148 aa6.05□□□□□ -1.44
CCDC93-207ENST00000474006 ZNF695Q8IW36 515 aa6.05□□□□□ -1.44
CCDC93-207ENST00000474006 VKORC1L1Q8N0U8 176 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms